RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 CNN3Q15417 329 aaKnown RBP11.55□□□□□ -0.56
CPNE1-227ENST00000498056 ACSM3Q53FZ2 586 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 FAM27D1Q5T7N8 215 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 GPR141Q7Z602 305 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 HPSE2Q8WWQ2 592 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 PP6455Q8WZ26 134 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 PIGTQ969N2 578 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 C10orf35Q96D05 121 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 RTL8AQ9BWD3 113 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 SLC22A4Q9H015 551 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 ABCB9Q9NP78 766 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 NOX4Q9NPH5 578 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 CKLFQ9UBR5 152 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 FBXO9Q9UK97 447 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-227ENST00000498056 ZDHHC8Q9ULC8 765 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 STUB1Q9UNE7 303 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 SF3B6Q9Y3B4 125 aaKnown RBP11.55□□□□□ -0.56
CPNE1-227ENST00000498056 MPC1Q9Y5U8 109 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 LOC100506127A0A0U1RQW1 187 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 SULT1B1O43704 296 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 NCR1O76036 304 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 FSTP19883 344 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 CCL8P80075 99 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 CEACAM19Q7Z692 300 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 SERPINA12Q8IW75 414 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 PARP16Q8N5Y8 322 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 OR13F1Q8NGS4 319 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 ITFG2Q969R8 447 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 TMIGD2Q96BF3 282 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 SORCS2Q96PQ0 1159 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 HIST1H2AAQ96QV6 131 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 OR2V2Q96R30 315 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 DIRC2Q96SL1 478 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 MICU1Q9BPX6 476 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 CHCHD6Q9BRQ6 235 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 MS4A5Q9H3V2 200 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 ZCCHC4Q9H5U6 513 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 SAP30LQ9HAJ7 183 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 NKIRAS2Q9NYR9 191 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 ARID1AO14497 2285 aa11.54□□□□□ -0.56
CPNE1-227ENST00000498056 SPG11Q96JI7 2443 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 TRBV5-7A0A0A0MS05 114 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 FAM230AA0A1W2PPH8 454 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 A6NLC8 198 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 H7C417 338 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 GMDSO60547 372 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 TFAP2AP05549 437 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 HCKP08631 526 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 AZGP1P25311 298 aaKnown RBP11.53□□□□□ -0.56
CPNE1-227ENST00000498056 ALDH3B2P48448 385 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 GPM6AP51674 278 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 PCGF3Q3KNV8 242 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 TIMM50Q3ZCQ8 353 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 HSD17B12Q53GQ0 312 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 PRAMEF6Q5VXH4 476 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 TMEM42Q69YG0 159 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 C22orf42Q6IC83 251 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 ASPHD2Q6ICH7 369 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 ITLN1Q8WWA0 313 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 ITPKCQ96DU7 683 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 YIPF6Q96EC8 236 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 TRMT61AQ96FX7 289 aaKnown RBP11.53□□□□□ -0.56
CPNE1-227ENST00000498056 TECTBQ96PL2 329 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 RAB1BQ9H0U4 201 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 OR51E2Q9H255 320 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 DECR2Q9NUI1 292 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 C14orf119Q9NWQ9 140 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 SSR3Q9UNL2 185 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 UNC79Q9P2D8 2635 aa11.53□□□□□ -0.56
CPNE1-227ENST00000498056 TRAV8-7A0A075B6U6 113 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 OR5B21A6NL26 309 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 SC5DO75845 299 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 ARL6IP5O75915 188 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 ATF1P18846 271 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 RAB3AP20336 220 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 MYL9P24844 172 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 DNASE1P24855 282 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 CALRP27797 417 aaKnown RBP11.52□□□□□ -0.57
CPNE1-227ENST00000498056 THBS2P35442 1172 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 RPL5P46777 297 aaKnown RBP11.52□□□□□ -0.57
CPNE1-227ENST00000498056 SRP9P49458 86 aaKnown RBP11.52□□□□□ -0.57
CPNE1-227ENST00000498056 MZT1Q08AG7 82 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 TESK1Q15569 626 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 UBE2V2Q15819 145 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 FAM209AQ5JX71 171 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 TMEM91Q6ZNR0 172 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 UTS2BQ765I0 119 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 SATL1Q86VE3 508 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 OR1M1Q8NGA1 313 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 OR51A2Q8NGJ7 313 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 OR5D14Q8NGL3 314 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 OR5P3Q8WZ94 311 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 RPL3LQ92901 407 aaKnown RBP11.52□□□□□ -0.57
CPNE1-227ENST00000498056 SPSB1Q96BD6 273 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 BORCS8Q96FH0 119 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 PERPQ96FX8 193 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 RNF170Q96K19 258 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 MEGF10Q96KG7 1140 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 LURAP1Q96LR2 239 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 FUNDC2Q9BWH2 189 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms