RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 RAB40AQ8WXH6 277 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 PTX4Q96A99 478 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 FGGYQ96C11 551 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 S100A16Q96FQ6 103 aaKnown RBP6.07□□□□□ -1.44
SHQ1-207ENST00000475558 REEP6Q96HR9 211 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 SORCS2Q96PQ0 1159 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 OR14A2Q96R54 314 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 KRTAP4-8Q9BYQ9 185 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 SLIRPQ9GZT3 109 aaKnown RBP6.07□□□□□ -1.44
SHQ1-207ENST00000475558 OPN3Q9H1Y3 402 aaPredicted RBP6.07□□□□□ -1.44
SHQ1-207ENST00000475558 CLEC4MQ9H2X3 399 aaPredicted RBP6.07□□□□□ -1.44
SHQ1-207ENST00000475558 LIME1Q9H400 295 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 RHOFQ9HBH0 211 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 BRD7Q9NPI1 651 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 ZNF224Q9NZL3 707 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 GPR160Q9UJ42 338 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 PLEKHA6Q9Y2H5 1048 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 MPC1Q9Y5U8 109 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 ETV7Q9Y603 341 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 SLC25A15Q9Y619 301 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 PCNX3Q9H6A9 2034 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 RTTNQ86VV8 2226 aa6.07□□□□□ -1.44
SHQ1-207ENST00000475558 A0A0A6YYH2 397 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 ZNF816-ZNF321PA0A0X1KG74 233 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 LOC107986453A0A1B0GWG9 222 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 METTL21EPA6NDL7 271 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 GGT3PA6NGU5 568 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 A6NJ64 397 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 ANKRD30BLA7E2S9 258 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 EEF1E1-BLOC1S5C9J1V9 151 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 CLDN25C9JDP6 229 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 EEF1E1O43324 174 aaKnown RBP6.06□□□□□ -1.44
SHQ1-207ENST00000475558 SULT1B1O43704 296 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 CST4P01036 141 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 APOA1P02647 267 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 ZNF35P13682 527 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 ZNF14P17017 642 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-207ENST00000475558 IGFBP3P17936 291 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-207ENST00000475558 CD40LGP29965 261 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 GCH1P30793 250 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 ETV6P41212 452 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 SOX2P48431 317 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 BMXP51813 675 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 FUT6P51993 359 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 MFGE8Q08431 387 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-207ENST00000475558 ARL6IP1Q15041 203 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 ZNF718Q3SXZ3 478 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 ZNF529Q6P280 563 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 SFXN4Q6P4A7 337 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 FBXW12Q6X9E4 464 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 MRPL21Q7Z2W9 205 aaKnown RBP6.06□□□□□ -1.44
SHQ1-207ENST00000475558 RDH10Q8IZV5 341 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 OR1M1Q8NGA1 313 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 OR5A2Q8NGI9 324 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 OR6M1Q8NGM8 313 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 FGFBP3Q8TAT2 258 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 ZNF671Q8TAW3 534 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 ZFAND2BQ8WV99 257 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 EDARADDQ8WWZ3 215 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 RNASE6Q93091 150 aaKnown RBP6.06□□□□□ -1.44
SHQ1-207ENST00000475558 PHF21AQ96BD5 680 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 HAVCR1Q96D42 359 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 C18orf12Q96KH6 178 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 ZNF75AQ96N20 296 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 WDFY2Q96P53 400 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 S100A13Q99584 98 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 TTTY10Q9BZA0 68 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 ACTR6Q9GZN1 396 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 PLGRKTQ9HBL7 147 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 PALMDQ9NP74 551 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 NKIRAS2Q9NYR9 191 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 MRPL15Q9P015 296 aaKnown RBP6.06□□□□□ -1.44
SHQ1-207ENST00000475558 CGGBP1Q9UFW8 167 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-207ENST00000475558 STEAP1Q9UHE8 339 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 SPATA2Q9UM82 520 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 N6AMT1Q9Y5N5 214 aa6.06□□□□□ -1.44
SHQ1-207ENST00000475558 NSD1Q96L73 2696 aaPredicted RBP6.05□□□□□ -1.44
SHQ1-207ENST00000475558 LOC100509620A0A075B734 347 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.05□□□□□ -1.44
SHQ1-207ENST00000475558 A0A1W2PPK0 400 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 A6NNC1 897 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 SLC17A2O00624 439 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 PIN1P1O15428 100 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 RGS5O15539 181 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 GOSR1O95249 250 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 CYB5AP00167 134 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 NRASP01111 189 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 MAS1P04201 325 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 CHRM2P08172 466 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 DBHP09172 617 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 INHBBP09529 407 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 PATE4P0C8F1 98 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 PSKH1P11801 424 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 ATF1P18846 271 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 HTR2CP28335 458 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 GLRXP35754 106 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 ALDH3B1P43353 468 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 NR4A2P43354 598 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 PPP5CP53041 499 aa6.05□□□□□ -1.44
SHQ1-207ENST00000475558 ATP1B3P54709 279 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms