RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 F5H5P2 479 aa11.9□□□□□ -0.5
CTSS-202ENST00000448301 TPD52L2O43399 206 aaKnown RBP11.9□□□□□ -0.5
CTSS-202ENST00000448301 PTBP3O95758 552 aaKnown RBP11.9□□□□□ -0.5
CTSS-202ENST00000448301 HSMCR30P0CW71 290 aa11.9□□□□□ -0.5
CTSS-202ENST00000448301 CPEP16870 476 aa11.9□□□□□ -0.5
CTSS-202ENST00000448301 TNFRSF1AP19438 455 aa11.9□□□□□ -0.5
CTSS-202ENST00000448301 SRP9P49458 86 aaKnown RBP11.9□□□□□ -0.5
CTSS-202ENST00000448301 MRPS11P82912 194 aaKnown RBP11.9□□□□□ -0.5
CTSS-202ENST00000448301 TSPAN14Q8NG11 270 aa11.9□□□□□ -0.5
CTSS-202ENST00000448301 OR8S1Q8NH09 359 aa11.9□□□□□ -0.5
CTSS-202ENST00000448301 TSEN15Q8WW01 171 aaKnown RBP11.9□□□□□ -0.5
CTSS-202ENST00000448301 PP6455Q8WZ26 134 aa11.9□□□□□ -0.5
CTSS-202ENST00000448301 MEGF10Q96KG7 1140 aa11.9□□□□□ -0.5
CTSS-202ENST00000448301 MICU1Q9BPX6 476 aa11.9□□□□□ -0.5
CTSS-202ENST00000448301 CHST5Q9GZS9 411 aa11.9□□□□□ -0.5
CTSS-202ENST00000448301 CXXC4Q9H2H0 198 aa11.9□□□□□ -0.5
CTSS-202ENST00000448301 PPP1R3EQ9H7J1 279 aa11.9□□□□□ -0.5
CTSS-202ENST00000448301 DYSFO75923 2080 aa11.9□□□□□ -0.5
CTSS-202ENST00000448301 SETXQ7Z333 2677 aaKnown RBP11.89□□□□□ -0.51
CTSS-202ENST00000448301 TRBV5-5A0A0J9YX44 114 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 ANKRD61A6NGH8 418 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 A6NIN4 97 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 GATBO75879 557 aaKnown RBP11.89□□□□□ -0.51
CTSS-202ENST00000448301 NRASP01111 189 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 OCM2P0CE71 109 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 DAOP14920 347 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 ZNF20P17024 532 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 CRYBB2P43320 205 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 GATA4P43694 442 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 RPS11P62280 158 aaKnown RBP eCLIP11.89□□□□□ -0.51
CTSS-202ENST00000448301 MAB21L1Q13394 359 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 CEACAM21Q3KPI0 293 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 SPRNQ5BIV9 151 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 LIPKQ5VXJ0 399 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 MS4A15Q8N5U1 240 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 PARP16Q8N5Y8 322 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 OR13C5Q8NGS8 318 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 ITLN1Q8WWA0 313 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 HPSE2Q8WWQ2 592 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 OR5P3Q8WZ94 311 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 FGGYQ96C11 551 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 ADAT3Q96EY9 351 aaPredicted RBP11.89□□□□□ -0.51
CTSS-202ENST00000448301 TECTBQ96PL2 329 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 HIST1H2AAQ96QV6 131 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 RTL8AQ9BWD3 113 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 C14orf119Q9NWQ9 140 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 VPS13CQ709C8 3753 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 AKAP9Q99996 3911 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 NAV2Q8IVL1 2488 aa11.89□□□□□ -0.51
CTSS-202ENST00000448301 ARID1AO14497 2285 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 TRIM64CA6NLI5 447 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 TMEM210A6NLX4 147 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 SSX4O60224 188 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 LY6HO94772 140 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 SERPINA3P01011 423 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 CD2P06729 351 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 Q499Y3 187 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 ARMCX4Q5H9R4 360 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 CEP78Q5JTW2 689 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 PLCXD3Q63HM9 321 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 PRSS57Q6UWY2 283 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 KCTD8Q6ZWB6 473 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 MOB3CQ70IA8 216 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 UTS2BQ765I0 119 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 SERPINA12Q8IW75 414 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 OR5A2Q8NGI9 324 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 THRSPQ92748 146 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 RDH5Q92781 318 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 ERGIC1Q969X5 290 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 GPR173Q9NS66 373 aa11.88□□□□□ -0.51
CTSS-202ENST00000448301 PRRC2AP48634 2157 aaKnown RBP11.87□□□□□ -0.51
CTSS-202ENST00000448301 IGHV1-69-2A0A0G2JMI3 117 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 LOC100289279A0A1B0GTE1 492 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 OR5B21A6NL26 309 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 CYSRT1A8MQ03 144 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 CSF3P09919 207 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 PSMA1P25786 263 aaKnown RBP11.87□□□□□ -0.51
CTSS-202ENST00000448301 PSMB9P28065 219 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 SOX2P48431 317 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 ART1P52961 327 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 CNN3Q15417 329 aaKnown RBP11.87□□□□□ -0.51
CTSS-202ENST00000448301 TRAM1Q15629 374 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 UBE2V2Q15819 145 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 SYT6Q5T7P8 510 aaPredicted RBP11.87□□□□□ -0.51
CTSS-202ENST00000448301 SHEQ5VZ18 495 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 DNM1P46Q6ZS02 220 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 WDR86Q86TI4 376 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 KRTAP1-3Q8IUG1 177 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 PHC2Q8IXK0 858 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 YIPF5Q969M3 257 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 TMEM106AQ96A25 262 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 FGF23Q9GZV9 251 aaPredicted RBP11.87□□□□□ -0.51
CTSS-202ENST00000448301 VCX3AQ9NNX9 186 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 GCM1Q9NP62 436 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 DLL4Q9NR61 685 aa11.87□□□□□ -0.51
CTSS-202ENST00000448301 ZNF879B4DU55 563 aa11.86□□□□□ -0.51
CTSS-202ENST00000448301 RP2O75695 350 aa11.86□□□□□ -0.51
CTSS-202ENST00000448301 INMTO95050 263 aa11.86□□□□□ -0.51
CTSS-202ENST00000448301 ALX3O95076 343 aa11.86□□□□□ -0.51
CTSS-202ENST00000448301 COL8A2P25067 703 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms