RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 HLA-DPB1P04440 258 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 SBK3P0C264 359 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 PITPNAQ00169 270 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 ACSM1Q08AH1 577 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 B3GLCTQ6Y288 498 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 LINGO2Q7L985 606 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 OR5K1Q8NHB7 308 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 MAGIXQ9H6Y5 334 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 HAO2Q9NYQ3 351 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 MEIKINA0A087WXM9 373 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 OVOL3O00110 214 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 ZNF250P15622 560 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 PAX1P15863 534 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 PTGFRP43088 359 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 DEFA6Q01524 100 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 RCN1Q15293 331 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 MEDAGQ5VYS4 303 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 ZNF322Q6U7Q0 402 aaPredicted RBP3.9□□□□□ -1.79
UBE4A-202ENST00000431736 BRD3OSQ6XYD6 125 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 RFPL4BQ6ZWI9 263 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 PHC2Q8IXK0 858 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 ZIC4Q8N9L1 334 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 GINS4Q9BRT9 223 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 HES4Q9HCC6 221 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 SAR1AQ9NR31 198 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 IGHV1-69DA0A0B4J2H0 117 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 ZNF780AO75290 641 aaPredicted RBP3.9□□□□□ -1.79
UBE4A-202ENST00000431736 IGHV1-69P01742 117 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 CFPP27918 469 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 FUT6P51993 359 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 TAS2R43P59537 309 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 ZNF92Q03936 586 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 TRAT1Q6PIZ9 186 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 SLC25A47Q6Q0C1 308 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 CMTM3Q96MX0 182 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 SORT1Q99523 831 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 RBM4BQ9BQ04 359 aaKnown RBP3.9□□□□□ -1.79
UBE4A-202ENST00000431736 ALG8Q9BVK2 526 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 ENY2Q9NPA8 101 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 GPR173Q9NS66 373 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 CHD9Q3L8U1 2897 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 TMEM178BH3BS89 294 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 J3QLW9 94 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 SIRPB1O00241 398 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 DVL1O14640 695 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 CDIPTO14735 213 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 NPFFO15130 113 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 BMP2P12643 396 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 ZNF19P17023 458 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 MYL9P24844 172 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 ZNF121P58317 390 aaPredicted RBP3.89□□□□□ -1.79
UBE4A-202ENST00000431736 HGFACQ04756 655 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 C4orf46Q504U0 113 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 KCTD20Q7Z5Y7 419 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 C12orf43Q96C57 262 aaKnown RBP3.89□□□□□ -1.79
UBE4A-202ENST00000431736 TSPAN32Q96QS1 320 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 GSTK1Q9Y2Q3 226 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 RPL36Q9Y3U8 105 aaKnown RBP3.89□□□□□ -1.79
UBE4A-202ENST00000431736 INSIG2Q9Y5U4 225 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 CHD6Q8TD26 2715 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 JMJD1CQ15652 2540 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 MED13LQ71F56 2210 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 FAM181BA6NEQ2 426 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 SH2D7A6NKC9 451 aaPredicted RBP3.89□□□□□ -1.79
UBE4A-202ENST00000431736 M0R1W7 72 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 PRODHO43272 600 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 HKR1P10072 659 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 TMEM11P17152 192 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 DUSP7Q16829 419 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 GLT8D1Q68CQ7 371 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 RTN4RL2Q86UN3 420 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 LRRC28Q86X40 367 aaPredicted RBP3.89□□□□□ -1.79
UBE4A-202ENST00000431736 ANKRD13BQ86YJ7 626 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 RDH10Q8IZV5 341 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 CHST4Q8NCG5 386 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 CLEC7AQ9BXN2 247 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 PFDN2Q9UHV9 154 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 A0A1W2PRQ8 180 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 DNAJC9-AS1A6NH13 148 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 SAC3D1A6NKF1 404 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 MS4A18H0YCH9 400 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 J3QT63 122 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 IGF2P01344 180 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 CD3GP09693 182 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 HLA-DOBP13765 273 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 ARFRP1Q13795 201 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 DGCR6Q14129 220 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 HERPUD1Q15011 391 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 MS4A18Q3C1V0 323 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 ZFP1Q6P2D0 407 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 ZNF782Q6ZMW2 699 aaPredicted RBP3.89□□□□□ -1.79
UBE4A-202ENST00000431736 TRPM8Q7Z2W7 1104 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 PNKDQ8N490 385 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 PRR18Q8N4B5 295 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 MRPS24Q96EL2 167 aaKnown RBP3.89□□□□□ -1.79
UBE4A-202ENST00000431736 IL4I1Q96RQ9 567 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 WNT5BQ9H1J7 359 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 MGAT4AQ9UM21 535 aa3.89□□□□□ -1.79
UBE4A-202ENST00000431736 HEATR1Q9H583 2144 aaKnown RBP3.89□□□□□ -1.79
UBE4A-202ENST00000431736 CCDC88CQ9P219 2028 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms