RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 NOP16Q9Y3C1 178 aaKnown RBP11.78□□□□□ -0.52
TPM3-211ENST00000368531 MPC1Q9Y5U8 109 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 CACNG2Q9Y698 323 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 TANC2Q9HCD6 1990 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 IGHV1-69-2A0A0G2JMI3 117 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 LOC100289279A0A1B0GTE1 492 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 A0A1B0GWJ7 208 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 ANKRD61A6NGH8 418 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 A6NLC8 198 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 OCM2P0CE71 109 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 TNFRSF1AP19438 455 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 PCMT1P22061 227 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 PSMB9P28065 219 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 BDH1Q02338 343 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 MLLT11Q13015 90 aaPredicted RBP11.77□□□□□ -0.53
TPM3-211ENST00000368531 TESK1Q15569 626 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 MPPED2Q15777 294 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 NEDD8Q15843 81 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 ARMCX4Q5H9R4 360 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 ZBTB37Q5TC79 503 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 MOGAT3Q86VF5 341 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 TSPAN14Q8NG11 270 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 ZNF420Q8TAQ5 688 aaPredicted RBP11.77□□□□□ -0.53
TPM3-211ENST00000368531 TRMT10AQ8TBZ6 339 aaKnown RBP11.77□□□□□ -0.53
TPM3-211ENST00000368531 OR5P3Q8WZ94 311 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 CCL17Q92583 94 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 RDH5Q92781 318 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 TMEM203Q969S6 136 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 ORAI1Q96D31 301 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 ITPKCQ96DU7 683 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 PGLYRP3Q96LB9 341 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 OPALINQ96PE5 141 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 FOXC2Q99958 501 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 MICU1Q9BPX6 476 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 FGF23Q9GZV9 251 aaPredicted RBP11.77□□□□□ -0.53
TPM3-211ENST00000368531 C14orf119Q9NWQ9 140 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 SPG11Q96JI7 2443 aa11.77□□□□□ -0.53
TPM3-211ENST00000368531 ARID1AO14497 2285 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 A0A1W2PPK0 400 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 TRIM64A6NGJ6 449 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 DHRS7CA6NNS2 312 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 ZNF732B4DXR9 585 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 INMTO95050 263 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 SERPINA3P01011 423 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 THBS2P35442 1172 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 CD200P41217 278 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 PDLIM4P50479 330 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 GPM6AP51674 278 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 UBE2V2Q15819 145 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 CLEC12BQ2HXU8 276 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 HFEQ30201 348 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 YIF1BQ5BJH7 314 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 CLEC2AQ6UVW9 174 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 WDR86Q86TI4 376 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 SPERTQ8NA61 448 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 HPSE2Q8WWQ2 592 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 ITFG2Q969R8 447 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 RTL8AQ9BWD3 113 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 ISYNA1Q9NPH2 558 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 DCAF16Q9NXF7 216 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 PPP1R3CQ9UQK1 317 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 APCP25054 2843 aa11.76□□□□□ -0.53
TPM3-211ENST00000368531 ABCA12Q86UK0 2595 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 ASH1LQ9NR48 2969 aaKnown RBP11.75□□□□□ -0.53
TPM3-211ENST00000368531 A0A087WXM4 84 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 FAM230AA0A1W2PPH8 454 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 OCMP0CE72 109 aaPredicted RBP11.75□□□□□ -0.53
TPM3-211ENST00000368531 CPEP16870 476 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 CRYBB2P43320 205 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 RPS11P62280 158 aaKnown RBP eCLIP11.75□□□□□ -0.53
TPM3-211ENST00000368531 RPS25P62851 125 aaKnown RBP11.75□□□□□ -0.53
TPM3-211ENST00000368531 MZT1Q08AG7 82 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 TPBGQ13641 420 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 INSL4Q14641 139 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 CEACAM21Q3KPI0 293 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 UBE2UQ5VVX9 321 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 TMEM42Q69YG0 159 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 ZNF826PQ6ZT77 177 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 BOLLQ8N9W6 283 aaKnown RBP11.75□□□□□ -0.53
TPM3-211ENST00000368531 OR13C9Q8NGT0 318 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 FAM168AQ92567 244 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 RPL3LQ92901 407 aaKnown RBP11.75□□□□□ -0.53
TPM3-211ENST00000368531 TMEM106AQ96A25 262 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 Q96MF0 132 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 OR14A2Q96R54 314 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 NR1H4Q96RI1 486 aaPredicted RBP11.75□□□□□ -0.53
TPM3-211ENST00000368531 CHST5Q9GZS9 411 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 ZNF696Q9H7X3 374 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 GCM1Q9NP62 436 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 ABCB9Q9NP78 766 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 SLC7A11Q9UPY5 501 aa11.75□□□□□ -0.53
TPM3-211ENST00000368531 ANKRD17O75179 2603 aaKnown RBP11.74□□□□□ -0.53
TPM3-211ENST00000368531 PRRC2AP48634 2157 aaKnown RBP11.74□□□□□ -0.53
TPM3-211ENST00000368531 NBPF19A0A087WUL8 3843 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 TRBV5-5A0A0J9YX44 114 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 hCG_1807616A0A1W2PRN6 198 aa11.74□□□□□ -0.53
TPM3-211ENST00000368531 PPIHO43447 177 aaKnown RBP11.74□□□□□ -0.53
TPM3-211ENST00000368531 GATBO75879 557 aaKnown RBP11.74□□□□□ -0.53
TPM3-211ENST00000368531 CYB5R3P00387 301 aaPredicted RBP11.74□□□□□ -0.53
TPM3-211ENST00000368531 CD2P06729 351 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms