RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 SNTG1Q9NSN8 517 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 CRIM1Q9NZV1 1036 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 FOXJ3Q9UPW0 622 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 PIGLQ9Y2B2 252 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 TRAV8-7A0A075B6U6 113 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 SHISA3A0PJX4 238 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 MEGF11A6BM72 1044 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 SHISA9B4DS77 424 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 GMDSO60547 372 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 CDRT1O95170 752 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 CST4P01036 141 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 IL1AP01583 271 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 CD37P11049 281 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 ZNF20P17024 532 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 KITLGP21583 273 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 MYL9P24844 172 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 LOXP28300 417 aaPredicted RBP6.88□□□□□ -1.31
CPNE3-209ENST00000620393 GCH1P30793 250 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 SDC2P34741 201 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 THBS4P35443 961 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 TGFBR1P36897 503 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 GNALP38405 381 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 RPS19P39019 145 aaKnown RBP6.88□□□□□ -1.31
CPNE3-209ENST00000620393 MPV17P39210 176 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 SERPINB10P48595 397 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 PSMD7P51665 324 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 SPOCK1Q08629 439 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 SPCS2Q15005 226 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 MSMPQ1L6U9 139 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 CEP78Q5JTW2 689 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 TMEM42Q69YG0 159 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 ASPHD2Q6ICH7 369 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 OR2T2Q6IF00 324 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 ZNF529Q6P280 563 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 UTS2BQ765I0 119 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 LRRTM1Q86UE6 522 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 KBTBD8Q8NFY9 601 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 OR56B2PQ8NGI1 322 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 SYNPRQ8TBG9 265 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 PP6455Q8WZ26 134 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 PIGTQ969N2 578 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 ORAI1Q96D31 301 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 SPOCK3Q9BQ16 436 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 TMEM204Q9BSN7 226 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 SLITRK2Q9H156 845 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 DCSTAMPQ9H295 470 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 ZCCHC4Q9H5U6 513 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 ZNF442Q9H7R0 627 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 TCF7L1Q9HCS4 588 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 CA10Q9NS85 328 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 TAS2R4Q9NYW5 299 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 CKLFQ9UBR5 152 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 PURGQ9UJV8 347 aaKnown RBP6.88□□□□□ -1.31
CPNE3-209ENST00000620393 RHBDD3Q9Y3P4 386 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 CMAHPQ9Y471 501 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 ATP23Q9Y6H3 246 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 CHD6Q8TD26 2715 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 PRR14LQ5THK1 2151 aa6.88□□□□□ -1.31
CPNE3-209ENST00000620393 IGLV3-9A0A075B6K5 115 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 IGKV1-9A0A0C4DH69 117 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 ZNF816-ZNF321PA0A0X1KG74 233 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 A0A1W2PPW3 197 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 ANKRD30BLA7E2S9 258 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 IQCF6A8MYZ5 107 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 E7EQL1 145 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 PDCD5O14737 125 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 PLAUP00749 431 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 NRASP01111 189 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 IGHV3-13P01766 116 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 ALDOBP05062 364 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 CLEC2LP0C7M8 214 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 FAHP16930 419 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 ATF1P18846 271 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 FSTP19883 344 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 RAB3AP20336 220 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 SELENOVP59797 346 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 PPP3R1P63098 170 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 UBE2V2Q15819 145 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 MOGQ16653 247 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 ALKBH6Q3KRA9 238 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 CLVS2Q5SYC1 327 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 VHLLQ6RSH7 139 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 MEX3BQ6ZN04 569 aaKnown RBP6.87□□□□□ -1.31
CPNE3-209ENST00000620393 CDH26Q8IXH8 852 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 FTMTQ8N4E7 242 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 OR1M1Q8NGA1 313 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 NDNFQ8TB73 568 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 PIGCQ92535 297 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 MRPL24Q96A35 216 aaKnown RBP6.87□□□□□ -1.31
CPNE3-209ENST00000620393 PIK3IP1Q96FE7 263 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 SLC30A2Q9BRI3 323 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 CHST5Q9GZS9 411 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 TPK1Q9H3S4 243 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 PLEKHA1Q9HB21 404 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 TMEM100Q9NV29 134 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 MRPL15Q9P015 296 aaKnown RBP6.87□□□□□ -1.31
CPNE3-209ENST00000620393 DUSP13Q9UII6 198 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 POU2F3Q9UKI9 436 aa6.87□□□□□ -1.31
CPNE3-209ENST00000620393 AK6Q9Y3D8 172 aaKnown RBP6.87□□□□□ -1.31
CPNE3-209ENST00000620393 RNF115Q9Y4L5 304 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms