RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 ISG15P05161 165 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 UBCP0CG48 685 aaKnown RBP13.16□□□□□ -0.3
SMCO4-206ENST00000596676 ACHEP22303 614 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 COL8A2P25067 703 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 SOX2P48431 317 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 ATP5J2P56134 94 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 MRPL28Q13084 256 aaKnown RBP13.16□□□□□ -0.3
SMCO4-206ENST00000596676 PRDX4Q13162 271 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 INSL4Q14641 139 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 OR8G1Q15617 311 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 TBCEQ15813 527 aaPredicted RBP13.16□□□□□ -0.3
SMCO4-206ENST00000596676 CCDC58Q4VC31 144 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 CEP78Q5JTW2 689 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 OR13G1Q8NGZ3 307 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 ITLN1Q8WWA0 313 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 SMIM19Q96E16 107 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 ADAT1Q9BUB4 502 aaKnown RBP13.16□□□□□ -0.3
SMCO4-206ENST00000596676 PAPOLGQ9BWT3 736 aaKnown RBP13.16□□□□□ -0.3
SMCO4-206ENST00000596676 MS4A5Q9H3V2 200 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 DCAF16Q9NXF7 216 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 ZNF391Q9UJN7 358 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 ITGB1BP2Q9UKP3 347 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 PRRC2AP48634 2157 aaKnown RBP13.15□□□□□ -0.3
SMCO4-206ENST00000596676 LOC100289279A0A1B0GTE1 492 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 A0A1B0GWJ7 208 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 LOC390937A0A1W2PQ73 354 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 C3orf80F5H4A9 247 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 TPD52L2O43399 206 aaKnown RBP13.15□□□□□ -0.3
SMCO4-206ENST00000596676 SSX4O60224 188 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 CDC14BO60729 498 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 INMTO95050 263 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 TNFAIP8O95379 198 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 BMP4P12644 408 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 DDOSTP39656 456 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 RPS11P62280 158 aaKnown RBP eCLIP13.15□□□□□ -0.3
SMCO4-206ENST00000596676 TNFAIP6P98066 277 aaPredicted RBP13.15□□□□□ -0.3
SMCO4-206ENST00000596676 HOXA4Q00056 320 aaPredicted RBP13.15□□□□□ -0.3
SMCO4-206ENST00000596676 ACSM1Q08AH1 577 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 RIPPLY1Q0D2K3 151 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 MAB21L1Q13394 359 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 PRAMEF6Q5VXH4 476 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 LIPKQ5VXJ0 399 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 KCTD8Q6ZWB6 473 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 MOB3CQ70IA8 216 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 WDR86Q86TI4 376 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 OR13C3Q8NGS6 347 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 MBD6Q96DN6 1003 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 MGLLQ99685 303 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 GSX2Q9BZM3 304 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 COMMD4Q9H0A8 199 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 RAB1BQ9H0U4 201 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 ZNF696Q9H7X3 374 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 CYSLTR2Q9NS75 346 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 BEX4Q9NWD9 120 aaPredicted RBP13.15□□□□□ -0.3
SMCO4-206ENST00000596676 MRPL15Q9P015 296 aaKnown RBP13.15□□□□□ -0.3
SMCO4-206ENST00000596676 HHLA2Q9UM44 414 aa13.15□□□□□ -0.3
SMCO4-206ENST00000596676 ZNF816-ZNF321PA0A0X1KG74 233 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 PLPP2O43688 288 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 GMDSO60547 372 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 MRPS14O60783 128 aaKnown RBP13.14□□□□□ -0.31
SMCO4-206ENST00000596676 MTRF1O75570 445 aaKnown RBP13.14□□□□□ -0.31
SMCO4-206ENST00000596676 F12P00748 615 aaPredicted RBP13.14□□□□□ -0.31
SMCO4-206ENST00000596676 CST4P01036 141 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 THBS2P35442 1172 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 LIPAP38571 399 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 EFNA4P52798 201 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 RPS25P62851 125 aaKnown RBP13.14□□□□□ -0.31
SMCO4-206ENST00000596676 NEDD8Q15843 81 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 ASPHD2Q6ICH7 369 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 ZNF367Q7RTV3 350 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 RNF144BQ7Z419 303 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 KRTAP1-3Q8IUG1 177 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 CSNK2A3Q8NEV1 391 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 TSPAN14Q8NG11 270 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 UBASH3BQ8TF42 649 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 NPRL2Q8WTW4 380 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 HPSE2Q8WWQ2 592 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 NINJ1Q92982 152 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 YIPF5Q969M3 257 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 TRMT61AQ96FX7 289 aaKnown RBP13.14□□□□□ -0.31
SMCO4-206ENST00000596676 MEGF10Q96KG7 1140 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 OR2V2Q96R30 315 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 TMED9Q9BVK6 235 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 ZNF275Q9NSD4 429 aaPredicted RBP13.14□□□□□ -0.31
SMCO4-206ENST00000596676 ZDHHC8Q9ULC8 765 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 ZNF281Q9Y2X9 895 aa13.14□□□□□ -0.31
SMCO4-206ENST00000596676 MAP1AP78559 2803 aaPredicted RBP13.13□□□□□ -0.31
SMCO4-206ENST00000596676 CCDC168Q8NDH2 2452 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 A0A1W2PPK0 400 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 GRPP07492 148 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 CD55P08174 381 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 ADH4P08319 380 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 SMIM18P0DKX4 95 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 ATP6V1B1P15313 513 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 PAX1P15863 534 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 PMELP40967 661 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 TAS2R43P59537 309 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 BDH1Q02338 343 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 TPBGQ13641 420 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 MPPED2Q15777 294 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms