RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 ISYNA1Q9NPH2 558 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 FBXO9Q9UK97 447 aaPredicted RBP18.04■□□□□ 0.48
VPS29-206ENST00000549578 EDARQ9UNE0 448 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 ZNF281Q9Y2X9 895 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 NAV2Q8IVL1 2488 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 NDUFS7O75251 213 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 DNASE1P24855 282 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 NEDD8Q15843 81 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 KCTD8Q6ZWB6 473 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 OR13C3Q8NGS6 347 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 UFD1Q92890 307 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 SORCS2Q96PQ0 1159 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 ZNF816-ZNF321PA0A0X1KG74 233 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 DHRS7CA6NNS2 312 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 INMTO95050 263 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 PSMB9P28065 219 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 TSTQ16762 297 aaKnown RBP18.03■□□□□ 0.48
VPS29-206ENST00000549578 ARMCX4Q5H9R4 360 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 CDH24Q86UP0 819 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 FTMTQ8N4E7 242 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 CCDC54Q8NEL0 328 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 TSEN15Q8WW01 171 aaKnown RBP18.03■□□□□ 0.48
VPS29-206ENST00000549578 PIGCQ92535 297 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 FCGR1BQ92637 280 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 ELMOD3Q96FG2 381 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 ADAT1Q9BUB4 502 aaKnown RBP18.03■□□□□ 0.48
VPS29-206ENST00000549578 ENPP5Q9UJA9 477 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 ZDHHC8Q9ULC8 765 aa18.03■□□□□ 0.48
VPS29-206ENST00000549578 A0A1B0GWJ7 208 aa18.02■□□□□ 0.47
VPS29-206ENST00000549578 ZNF850A8MQ14 1090 aa18.02■□□□□ 0.47
VPS29-206ENST00000549578 CST4P01036 141 aa18.02■□□□□ 0.47
VPS29-206ENST00000549578 ZNF12P17014 697 aa18.02■□□□□ 0.47
VPS29-206ENST00000549578 GNALP38405 381 aa18.02■□□□□ 0.47
VPS29-206ENST00000549578 SOX2P48431 317 aa18.02■□□□□ 0.47
VPS29-206ENST00000549578 RPS11P62280 158 aaKnown RBP eCLIP18.02■□□□□ 0.47
VPS29-206ENST00000549578 CCL8P80075 99 aa18.02■□□□□ 0.47
VPS29-206ENST00000549578 PRDX4Q13162 271 aa18.02■□□□□ 0.47
VPS29-206ENST00000549578 TPBGQ13641 420 aa18.02■□□□□ 0.47
VPS29-206ENST00000549578 OR8G1Q15617 311 aa18.02■□□□□ 0.47
VPS29-206ENST00000549578 DMRTC1Q5HYR2 192 aa18.02■□□□□ 0.47
VPS29-206ENST00000549578 GPR148Q8TDV2 347 aa18.02■□□□□ 0.47
VPS29-206ENST00000549578 ADAT3Q96EY9 351 aaPredicted RBP18.02■□□□□ 0.47
VPS29-206ENST00000549578 RAB1BQ9H0U4 201 aa18.02■□□□□ 0.47
VPS29-206ENST00000549578 DHDHQ9UQ10 334 aa18.02■□□□□ 0.47
VPS29-206ENST00000549578 SETXQ7Z333 2677 aaKnown RBP18.02■□□□□ 0.47
VPS29-206ENST00000549578 PDZD2O15018 2839 aa18.01■□□□□ 0.47
VPS29-206ENST00000549578 F5H5P2 479 aa18.01■□□□□ 0.47
VPS29-206ENST00000549578 NCR1O76036 304 aa18.01■□□□□ 0.47
VPS29-206ENST00000549578 LY6HO94772 140 aa18.01■□□□□ 0.47
VPS29-206ENST00000549578 CD1AP06126 327 aa18.01■□□□□ 0.47
VPS29-206ENST00000549578 SMIM18P0DKX4 95 aa18.01■□□□□ 0.47
VPS29-206ENST00000549578 CPEP16870 476 aa18.01■□□□□ 0.47
VPS29-206ENST00000549578 YIF1BQ5BJH7 314 aa18.01■□□□□ 0.47
VPS29-206ENST00000549578 ZBTB37Q5TC79 503 aa18.01■□□□□ 0.47
VPS29-206ENST00000549578 ITFG2Q969R8 447 aa18.01■□□□□ 0.47
VPS29-206ENST00000549578 FGGYQ96C11 551 aa18.01■□□□□ 0.47
VPS29-206ENST00000549578 TMED9Q9BVK6 235 aa18.01■□□□□ 0.47
VPS29-206ENST00000549578 SLC22A4Q9H015 551 aa18.01■□□□□ 0.47
VPS29-206ENST00000549578 ZNF275Q9NSD4 429 aaPredicted RBP18.01■□□□□ 0.47
VPS29-206ENST00000549578 ZNF701Q9NV72 531 aaPredicted RBP18.01■□□□□ 0.47
VPS29-206ENST00000549578 ADH4P08319 380 aa18■□□□□ 0.47
VPS29-206ENST00000549578 RPSAP08865 295 aaKnown RBP18■□□□□ 0.47
VPS29-206ENST00000549578 TNFAIP6P98066 277 aaPredicted RBP18■□□□□ 0.47
VPS29-206ENST00000549578 GPR50Q13585 617 aa18■□□□□ 0.47
VPS29-206ENST00000549578 SPRNQ5BIV9 151 aa18■□□□□ 0.47
VPS29-206ENST00000549578 CEP78Q5JTW2 689 aa18■□□□□ 0.47
VPS29-206ENST00000549578 PHC2Q8IXK0 858 aa18■□□□□ 0.47
VPS29-206ENST00000549578 UBASH3BQ8TF42 649 aa18■□□□□ 0.47
VPS29-206ENST00000549578 PERPQ96FX8 193 aa18■□□□□ 0.47
VPS29-206ENST00000549578 DIRC2Q96SL1 478 aa18■□□□□ 0.47
VPS29-206ENST00000549578 CSMD1Q96PZ7 3565 aa18■□□□□ 0.47
VPS29-206ENST00000549578 NOTCH2Q04721 2471 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 IGHV3-64DA0A0J9YX35 117 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 TRIM64CA6NLI5 447 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 TPD52L2O43399 206 aaKnown RBP17.99■□□□□ 0.47
VPS29-206ENST00000549578 GMDSO60547 372 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 OCM2P0CE71 109 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 ZNF20P17024 532 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 PTH2RP49190 550 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 SSX1Q16384 188 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 DEFB113Q30KQ7 82 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 PCGF3Q3KNV8 242 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 CLVS2Q5SYC1 327 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 TMEM42Q69YG0 159 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 KRT74Q7RTS7 529 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 ZDHHC23Q8IYP9 409 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 NINJ1Q92982 152 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 TMEM203Q969S6 136 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 TRMT61AQ96FX7 289 aaKnown RBP17.99■□□□□ 0.47
VPS29-206ENST00000549578 GPR173Q9NS66 373 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 NKIRAS2Q9NYR9 191 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 MPC1Q9Y5U8 109 aa17.99■□□□□ 0.47
VPS29-206ENST00000549578 TRBV5-5A0A0J9YX44 114 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 ANKRD61A6NGH8 418 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 NRASP01111 189 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 IGHV4-39P01824 125 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 HPXP02790 462 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 ERCC1P07992 297 aaPredicted RBP17.98■□□□□ 0.47
VPS29-206ENST00000549578 TNFSF4P23510 183 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 RPS25P62851 125 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms