RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 B9D2Q9BPU9 175 aa13.41□□□□□ -0.26
VIM-208ENST00000497849 SERTAD4Q9NUC0 356 aa13.41□□□□□ -0.26
VIM-208ENST00000497849 C1orf123Q9NWV4 160 aa13.41□□□□□ -0.26
VIM-208ENST00000497849 COA3Q9Y2R0 106 aaPredicted RBP13.41□□□□□ -0.26
VIM-208ENST00000497849 ADAM18Q9Y3Q7 739 aa13.41□□□□□ -0.26
VIM-208ENST00000497849 AP4S1Q9Y587 144 aa13.41□□□□□ -0.26
VIM-208ENST00000497849 PRSS37A4D1T9 235 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 H3BNX3 289 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 CHST1O43916 411 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 GADD45GO95257 159 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 LHBP01229 141 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 HOXB6P17509 224 aaKnown RBP13.4□□□□□ -0.26
VIM-208ENST00000497849 CD33P20138 364 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 UBE2E1P51965 193 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 HABP2Q14520 560 aaPredicted RBP13.4□□□□□ -0.26
VIM-208ENST00000497849 SNCBQ16143 134 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 KRTAP27-1Q3LI81 207 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 OR2T5Q6IEZ7 315 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 ZNF730Q6ZMV8 503 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 TMEM179BQ7Z7N9 219 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 NRMQ8IXM6 262 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 CMTM4Q8IZR5 234 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 PLPP7Q8NBV4 271 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 OR2T29Q8NH02 315 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 SLC7A13Q8TCU3 470 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 AJUBAQ96IF1 538 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 Q96M85 177 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 CCL13Q99616 98 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 OCSTAMPQ9BR26 566 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 FUZQ9BT04 418 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 ARMC1Q9NVT9 282 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 NKX1-2Q9UD57 310 aaPredicted RBP13.4□□□□□ -0.26
VIM-208ENST00000497849 U3KQV3 271 aa13.4□□□□□ -0.26
VIM-208ENST00000497849 A0A1W2PRQ8 180 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 TNFRSF11BO00300 401 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 IMPA2O14732 288 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 CST1P01037 141 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 SLC34A1Q06495 639 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 ACSM1Q08AH1 577 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 DGCR6Q14129 220 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 AMIGO2Q86SJ2 522 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 NAA40Q86UY6 237 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 GLB1L2Q8IW92 636 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 FAM216BQ8N7L0 139 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 OR4C15Q8NGM1 316 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 SPRYD4Q8WW59 207 aaPredicted RBP13.39□□□□□ -0.27
VIM-208ENST00000497849 ACOT11Q8WXI4 607 aaPredicted RBP13.39□□□□□ -0.27
VIM-208ENST00000497849 ADAT1Q9BUB4 502 aaKnown RBP13.39□□□□□ -0.27
VIM-208ENST00000497849 HDHD2Q9H0R4 259 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 SYT4Q9H2B2 425 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 ZNF702PQ9H963 129 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 GRHPRQ9UBQ7 328 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 LYVE1Q9Y5Y7 322 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 LHFPL6Q9Y693 200 aa13.39□□□□□ -0.27
VIM-208ENST00000497849 GNGT2O14610 69 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 AHCYL1O43865 530 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 SLC16A7O60669 478 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 KHDRBS3O75525 346 aaKnown RBP13.38□□□□□ -0.27
VIM-208ENST00000497849 ACSM4P0C7M7 580 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 FCGR1AP12314 374 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 ZNF26P17031 533 aaPredicted RBP13.38□□□□□ -0.27
VIM-208ENST00000497849 PAX6P26367 422 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 GPR4P46093 362 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 SMIM11AP58511 58 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 KCNMB1Q16558 191 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 WDR38Q5JTN6 314 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 CORO6Q6QEF8 472 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 MBOAT2Q6ZWT7 520 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 PGAP1Q75T13 922 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 FAM122BQ7Z309 247 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 GJC3Q8NFK1 279 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 OR13C2Q8NGS9 318 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 DCTN5Q9BTE1 182 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 NPFFR1Q9GZQ6 430 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 SLC22A4Q9H015 551 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 FAM234AQ9H0X4 552 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 RERGLQ9H628 205 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 YY1AP1Q9H869 796 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 RAB18Q9NP72 206 aa13.38□□□□□ -0.27
VIM-208ENST00000497849 SAMHD1Q9Y3Z3 626 aaKnown RBP13.38□□□□□ -0.27
VIM-208ENST00000497849 HTR3EA5X5Y0 456 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 CD300LBA8K4G0 201 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 XKRYO14609 159 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 GMDSO60547 372 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 GRPP07492 148 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 CD14P08571 375 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 AMY2BP19961 511 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 HMGA2P52926 109 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 PRKCDQ05655 676 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 MEP1BQ16820 701 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 LRRC75BQ2VPJ9 315 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 ANKDD1AQ495B1 522 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 HCP5Q6MZN7 132 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 RRM2BQ7LG56 351 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 OAFQ86UD1 273 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 HS3ST5Q8IZT8 346 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 PQLC1Q8N2U9 271 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 OR9Q2Q8NGE9 314 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 OR51G2Q8NGK0 314 aa13.37□□□□□ -0.27
VIM-208ENST00000497849 C8orf46Q8TAG6 207 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms