RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 CLEC18AA5D8T8 446 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 ANKRD30BLA7E2S9 258 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 VSTM5A8MXK1 200 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 SLC22A1O15245 554 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 CDRT1O95170 752 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 CLDN1O95832 211 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 SDC2P34741 201 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 SPCS2Q15005 226 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 MSMPQ1L6U9 139 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 CLEC18BQ6UXF7 455 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 LRP11Q86VZ4 500 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 CLEC18CQ8NCF0 446 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 PP6455Q8WZ26 134 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 C10orf35Q96D05 121 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 TPK1Q9H3S4 243 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 ZCCHC4Q9H5U6 513 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 GPR173Q9NS66 373 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 KCNN3Q9UGI6 736 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 PURGQ9UJV8 347 aaKnown RBP11.1□□□□□ -0.63
CBWD3-203ENST00000377344 CADP27708 2225 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 COL12A1Q99715 3063 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 A0A1W2PPW3 197 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 ZNF850A8MQ14 1090 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 LILRA1O75019 489 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 NRASP01111 189 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 ZNF250P15622 560 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 RAB3AP20336 220 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 CEP78Q5JTW2 689 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 CLVS2Q5SYC1 327 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 USP43Q70EL4 1123 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 NPRL2Q8WTW4 380 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 MRPL37Q9BZE1 423 aaKnown RBP11.09□□□□□ -0.63
CBWD3-203ENST00000377344 CHST5Q9GZS9 411 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 DCSTAMPQ9H295 470 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 PPP1R3EQ9H7J1 279 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 SNTG1Q9NSN8 517 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 CISD1Q9NZ45 108 aaKnown RBP11.09□□□□□ -0.63
CBWD3-203ENST00000377344 SHISA3A0PJX4 238 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 IQCF6A8MYZ5 107 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 E7EQL1 145 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 ZNF701M0R085 212 aaPredicted RBP11.09□□□□□ -0.63
CBWD3-203ENST00000377344 GMDSO60547 372 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 OR4A8P0C604 315 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 FSTP19883 344 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 CA6P23280 308 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 LOXP28300 417 aaPredicted RBP11.09□□□□□ -0.63
CBWD3-203ENST00000377344 MTNR1BP49286 362 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 ADIPOQQ15848 244 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 TMEM255AQ5JRV8 349 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 ZBTB37Q5TC79 503 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 PLCXD3Q63HM9 321 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 ASPHD2Q6ICH7 369 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 MOB3CQ70IA8 216 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 OR1M1Q8NGA1 313 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 OR51A2Q8NGJ7 313 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 MRPL24Q96A35 216 aaKnown RBP11.09□□□□□ -0.63
CBWD3-203ENST00000377344 SPOCK3Q9BQ16 436 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 PLK3Q9H4B4 646 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 ZNF442Q9H7R0 627 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 GPR160Q9UJ42 338 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 FOXJ3Q9UPW0 622 aa11.09□□□□□ -0.63
CBWD3-203ENST00000377344 TRAV1-2A0A0B4J238 106 aa11.08□□□□□ -0.64
CBWD3-203ENST00000377344 ANXA2P2A6NMY6 339 aa11.08□□□□□ -0.64
CBWD3-203ENST00000377344 A6NNC1 897 aa11.08□□□□□ -0.64
CBWD3-203ENST00000377344 MAGEB3O15480 346 aa11.08□□□□□ -0.64
CBWD3-203ENST00000377344 SULT1B1O43704 296 aa11.08□□□□□ -0.64
CBWD3-203ENST00000377344 IGHV3-13P01766 116 aa11.08□□□□□ -0.64
CBWD3-203ENST00000377344 HCKP08631 526 aa11.08□□□□□ -0.64
CBWD3-203ENST00000377344 CLEC2LP0C7M8 214 aa11.08□□□□□ -0.64
CBWD3-203ENST00000377344 KITLGP21583 273 aa11.08□□□□□ -0.64
CBWD3-203ENST00000377344 RPS19P39019 145 aaKnown RBP11.08□□□□□ -0.64
CBWD3-203ENST00000377344 PRDX4Q13162 271 aa11.08□□□□□ -0.64
CBWD3-203ENST00000377344 DAZAP2Q15038 168 aaPredicted RBP11.08□□□□□ -0.64
CBWD3-203ENST00000377344 UBE2V2Q15819 145 aa11.08□□□□□ -0.64
CBWD3-203ENST00000377344 ZNF672Q499Z4 452 aaPredicted RBP11.08□□□□□ -0.64
CBWD3-203ENST00000377344 SP5Q6BEB4 398 aaPredicted RBP11.08□□□□□ -0.64
CBWD3-203ENST00000377344 OR8G5Q8NG78 346 aa11.08□□□□□ -0.64
CBWD3-203ENST00000377344 TRMT10AQ8TBZ6 339 aaKnown RBP11.08□□□□□ -0.64
CBWD3-203ENST00000377344 DVL3Q92997 716 aaPredicted RBP11.08□□□□□ -0.64
CBWD3-203ENST00000377344 ITFG2Q969R8 447 aa11.08□□□□□ -0.64
CBWD3-203ENST00000377344 TMEM204Q9BSN7 226 aa11.08□□□□□ -0.64
CBWD3-203ENST00000377344 DCUN1D5Q9BTE7 237 aa11.08□□□□□ -0.64
CBWD3-203ENST00000377344 MRPL15Q9P015 296 aaKnown RBP11.08□□□□□ -0.64
CBWD3-203ENST00000377344 TAAR3PQ9P1P4 343 aa11.08□□□□□ -0.64
CBWD3-203ENST00000377344 MYEF2Q9P2K5 600 aaKnown RBP11.08□□□□□ -0.64
CBWD3-203ENST00000377344 AK6Q9Y3D8 172 aaKnown RBP11.08□□□□□ -0.64
CBWD3-203ENST00000377344 PLSCR5A0PG75 271 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 PDCD5O14737 125 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 NCR1O76036 304 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 CST4P01036 141 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 COX6B1P14854 86 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 IGFBP3P17936 291 aaPredicted RBP11.07□□□□□ -0.64
CBWD3-203ENST00000377344 RAB3BP20337 219 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 APOBEC3AP31941 199 aaPredicted RBP11.07□□□□□ -0.64
CBWD3-203ENST00000377344 SERPINF1P36955 418 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 CNN3Q15417 329 aaKnown RBP11.07□□□□□ -0.64
CBWD3-203ENST00000377344 NKPD1Q17RQ9 610 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 UTS2BQ765I0 119 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 TPRA1Q86W33 373 aa11.07□□□□□ -0.64
CBWD3-203ENST00000377344 ZDHHC23Q8IYP9 409 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms