RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 OPN1MWP04001 364 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 HOXD4P09016 255 aaPredicted RBP6.35□□□□□ -1.39
RAG1-201ENST00000299440 OPN1MW2P0DN77 364 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 OPN1MW3P0DN78 364 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 S100A4P26447 101 aaKnown RBP6.35□□□□□ -1.39
RAG1-201ENST00000299440 TOMM34Q15785 309 aaPredicted RBP6.35□□□□□ -1.39
RAG1-201ENST00000299440 LY6EQ16553 131 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 SOWAHCQ53LP3 525 aaPredicted RBP6.35□□□□□ -1.39
RAG1-201ENST00000299440 CDCP2Q5VXM1 449 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 ZNF620Q6ZNG0 422 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 SLC7A6Q92536 515 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 GRAMD2BQ96HH9 432 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 SEC22AQ96IW7 307 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 LRFN5Q96NI6 719 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 ISYNA1Q9NPH2 558 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 DLL4Q9NR61 685 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 PSG11Q9UQ72 335 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 SPTBN2O15020 2390 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 RGPD4Q7Z3J3 1758 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 ALOX5APP20292 161 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 FCARP24071 287 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 TNXAQ16473 311 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 SLC25A30Q5SVS4 291 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 CBLN3Q6UW01 205 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 OR5D13Q8NGL4 314 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 OR2T35Q8NGX2 323 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 OLIG1Q8TAK6 271 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 MRGPRDQ8TDS7 321 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 UCN2Q96RP3 112 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 KLK13Q9UKR3 277 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 ZNF835Q9Y2P0 537 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 PUS1Q9Y606 427 aaKnown RBP eCLIP6.35□□□□□ -1.39
RAG1-201ENST00000299440 COL4A5P29400 1685 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 SEMA7AO75326 666 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 IAPPP10997 89 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 MPGP29372 298 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 SELENOPP49908 381 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 FLI1Q01543 452 aaPredicted RBP6.35□□□□□ -1.39
RAG1-201ENST00000299440 TAGLNQ01995 201 aaKnown RBP6.35□□□□□ -1.39
RAG1-201ENST00000299440 ZNF691Q5VV52 312 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 NANPQ8TBE9 248 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 JAM3Q9BX67 310 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 PECRQ9BY49 303 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 RNF7Q9UBF6 113 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 ZDBF2Q9HCK1 2354 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 KCNE1BA0A087WTH5 132 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 CTSSP25774 331 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 THBS4P35443 961 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 LIPAP38571 399 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 ADGRG3Q86Y34 549 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 OR13D1Q8NGV5 346 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 DNASE2BQ8WZ79 361 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 LIN37Q96GY3 246 aaPredicted RBP6.35□□□□□ -1.39
RAG1-201ENST00000299440 RNF115Q9Y4L5 304 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 PCP4L1A6NKN8 68 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 CYR61O00622 381 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 NKX2-2O95096 273 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 PDLIM4P50479 330 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 SFXN4Q6P4A7 337 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 C20orf196Q8IYI0 205 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 OR2L13Q8N349 312 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 DCTN5Q9BTE1 182 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 CMC2Q9NRP2 79 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 NAGKQ9UJ70 344 aa6.35□□□□□ -1.39
RAG1-201ENST00000299440 CFHR1Q03591 330 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 LGI3Q8N145 548 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 ZFP62Q8NB50 900 aaPredicted RBP6.34□□□□□ -1.39
RAG1-201ENST00000299440 ZNF420Q8TAQ5 688 aaPredicted RBP6.34□□□□□ -1.39
RAG1-201ENST00000299440 ADAMTS17Q8TE56 1095 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 TAAR6Q96RI8 345 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 MMP28Q9H239 520 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 KCNIP2Q9NS61 270 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 LIN7CQ9NUP9 197 aaKnown RBP6.34□□□□□ -1.39
RAG1-201ENST00000299440 TNS1Q9HBL0 1735 aaKnown RBP6.34□□□□□ -1.39
RAG1-201ENST00000299440 IGHV1-45A0A0A0MS14 117 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 A0A1W2PQM1 296 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 OR2F2O95006 317 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 APELAP0DMC3 54 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 OR5I1Q13606 314 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 SLC17A1Q14916 467 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 ZNF181Q2M3W8 571 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 IAH1Q2TAA2 248 aaPredicted RBP6.34□□□□□ -1.39
RAG1-201ENST00000299440 GDPGP1Q6ZNW5 385 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 LRRC28Q86X40 367 aaPredicted RBP6.34□□□□□ -1.39
RAG1-201ENST00000299440 SPACA3Q8IXA5 215 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 Q8IYB0 196 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 RBM14Q96PK6 669 aaKnown RBP6.34□□□□□ -1.39
RAG1-201ENST00000299440 ARPC5LQ9BPX5 153 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 UCK1Q9HA47 277 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 ASIC5Q9NY37 505 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 IL36GQ9NZH8 169 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 HRKO00198 91 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 ZNHIT1O43257 154 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 PEX11BO96011 259 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 ARG1P05089 322 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 HLA-DOBP13765 273 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 ATF1P18846 271 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 FBXW9Q5XUX1 488 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 WDR88Q6ZMY6 472 aa6.34□□□□□ -1.39
RAG1-201ENST00000299440 FAM58AQ8N1B3 248 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms