RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W SAN1P22470 610 aa2.64□□□□□ -1.99
VPS16YPL045W XRS2P33301 854 aa2.64□□□□□ -1.99
VPS16YPL045W TGL1P34163 548 aa2.64□□□□□ -1.99
VPS16YPL045W MUD2P36084 527 aaKnown RBP2.64□□□□□ -1.99
VPS16YPL045W LAM1P38851 1228 aa2.64□□□□□ -1.99
VPS16YPL045W SWD1P39706 426 aa2.64□□□□□ -1.99
VPS16YPL045W PUG1P40100 303 aa2.64□□□□□ -1.99
VPS16YPL045W UPF3P48412 387 aaKnown RBP2.64□□□□□ -1.99
VPS16YPL045W IMH1Q06704 911 aaKnown RBP2.64□□□□□ -1.99
VPS16YPL045W BRE4Q07660 1125 aa2.64□□□□□ -1.99
VPS16YPL045W MCH5Q08777 521 aa2.64□□□□□ -1.99
VPS16YPL045W YEL076C-AP0CX16 216 aa2.64□□□□□ -1.99
VPS16YPL045W YLR464WP0CX17 216 aa2.64□□□□□ -1.99
VPS16YPL045W MTF2P10849 440 aa2.64□□□□□ -1.99
VPS16YPL045W SRP101P32916 621 aa2.64□□□□□ -1.99
VPS16YPL045W SEG2P34250 1132 aa2.64□□□□□ -1.99
VPS16YPL045W PPE1P38796 400 aa2.64□□□□□ -1.99
VPS16YPL045W YEL076CP39971 216 aa2.64□□□□□ -1.99
VPS16YPL045W SBE2P42223 864 aaKnown RBP2.64□□□□□ -1.99
VPS16YPL045W CPR6P53691 371 aaKnown RBP2.64□□□□□ -1.99
VPS16YPL045W MRPL13Q02204 264 aa2.64□□□□□ -1.99
VPS16YPL045W YMR210WQ03649 449 aa2.64□□□□□ -1.99
VPS16YPL045W YPS7Q06325 596 aa2.64□□□□□ -1.99
VPS16YPL045W RTK1Q12100 620 aaPredicted RBP2.64□□□□□ -1.99
VPS16YPL045W PSF3Q12146 194 aa2.64□□□□□ -1.99
VPS16YPL045W RIB2Q12362 591 aaKnown RBP2.64□□□□□ -1.99
VPS16YPL045W ENT1Q12518 454 aa2.64□□□□□ -1.99
VPS16YPL045W RPS17AP02407 136 aaKnown RBP2.63□□□□□ -1.99
VPS16YPL045W VAS1P07806 1104 aaKnown RBP2.63□□□□□ -1.99
VPS16YPL045W RPS17BP14127 136 aaKnown RBP2.63□□□□□ -1.99
VPS16YPL045W CMP2P14747 604 aa2.63□□□□□ -1.99
VPS16YPL045W CBP3P21560 335 aa2.63□□□□□ -1.99
VPS16YPL045W MCM3P24279 971 aaKnown RBP2.63□□□□□ -1.99
VPS16YPL045W ADP1P25371 1049 aa2.63□□□□□ -1.99
VPS16YPL045W YCL049CP25577 312 aa2.63□□□□□ -1.99
VPS16YPL045W IMG2P25642 146 aaPredicted RBP2.63□□□□□ -1.99
VPS16YPL045W DGR2P32330 852 aa2.63□□□□□ -1.99
VPS16YPL045W SFA1P32771 386 aa2.63□□□□□ -1.99
VPS16YPL045W BLI1P35727 113 aa2.63□□□□□ -1.99
VPS16YPL045W ABZ1P37254 787 aaPredicted RBP2.63□□□□□ -1.99
VPS16YPL045W KAP123P40069 1113 aaKnown RBP2.63□□□□□ -1.99
VPS16YPL045W IMA5P40884 581 aa2.63□□□□□ -1.99
VPS16YPL045W MAD2P40958 196 aa2.63□□□□□ -1.99
VPS16YPL045W MMM1P41800 426 aa2.63□□□□□ -1.99
VPS16YPL045W SSY5P47002 699 aa2.63□□□□□ -1.99
VPS16YPL045W JJJ3P47138 172 aa2.63□□□□□ -1.99
VPS16YPL045W YGR012WP53206 393 aa2.63□□□□□ -1.99
VPS16YPL045W MSC2Q03455 724 aa2.63□□□□□ -1.99
VPS16YPL045W SGD1Q06132 899 aa2.63□□□□□ -1.99
VPS16YPL045W CDA1Q06702 301 aa2.63□□□□□ -1.99
VPS16YPL045W TRM8Q12009 286 aa2.63□□□□□ -1.99
VPS16YPL045W GPR1Q12361 961 aa2.63□□□□□ -1.99
VPS16YPL045W MYO2P19524 1574 aaKnown RBP2.63□□□□□ -1.99
VPS16YPL045W NUC1P08466 329 aa2.63□□□□□ -1.99
VPS16YPL045W AAC3P18238 307 aa2.63□□□□□ -1.99
VPS16YPL045W ACO1P19414 778 aaKnown RBP RIP-Chip data2.63□□□□□ -1.99not detected
VPS16YPL045W APL1P27351 700 aa2.63□□□□□ -1.99
VPS16YPL045W AIM26P32858 118 aa2.63□□□□□ -1.99
VPS16YPL045W SLC1P33333 303 aa2.63□□□□□ -1.99
VPS16YPL045W WHI3P34761 661 aaKnown RBP2.63□□□□□ -1.99
VPS16YPL045W STT3P39007 718 aaKnown RBP2.63□□□□□ -1.99
VPS16YPL045W NOP16P40007 231 aaKnown RBP2.63□□□□□ -1.99
VPS16YPL045W SET2P46995 733 aaKnown RBP2.63□□□□□ -1.99
VPS16YPL045W TFC6Q06339 672 aa2.63□□□□□ -1.99
VPS16YPL045W VIP1Q06685 1146 aaKnown RBP2.63□□□□□ -1.99
VPS16YPL045W DIN7Q12086 430 aa2.63□□□□□ -1.99
VPS16YPL045W PHM7Q12252 991 aa2.63□□□□□ -1.99
VPS16YPL045W HSF1P10961 833 aa2.62□□□□□ -1.99
VPS16YPL045W UBC1P21734 215 aaKnown RBP2.62□□□□□ -1.99
VPS16YPL045W PAH1P32567 862 aa2.62□□□□□ -1.99
VPS16YPL045W BCD1P38772 366 aa2.62□□□□□ -1.99
VPS16YPL045W AXL2P38928 823 aa2.62□□□□□ -1.99
VPS16YPL045W DUN1P39009 513 aa2.62□□□□□ -1.99
VPS16YPL045W PEX7P39108 375 aa2.62□□□□□ -1.99
VPS16YPL045W DPH1P40487 425 aaKnown RBP2.62□□□□□ -1.99
VPS16YPL045W VHR1P40522 640 aa2.62□□□□□ -1.99
VPS16YPL045W VTC2P43585 828 aa2.62□□□□□ -1.99
VPS16YPL045W SGM1P47166 707 aa2.62□□□□□ -1.99
VPS16YPL045W BUD9P53226 547 aa2.62□□□□□ -1.99
VPS16YPL045W RCR2Q03446 210 aaKnown RBP2.62□□□□□ -1.99
VPS16YPL045W ASM4Q05166 528 aa2.62□□□□□ -1.99
VPS16YPL045W VID22Q05934 901 aa2.62□□□□□ -1.99
VPS16YPL045W STP4Q07351 490 aa2.62□□□□□ -1.99
VPS16YPL045W PHO5P00635 467 aa2.61□□□□□ -1.99
VPS16YPL045W LEU2P04173 364 aaPredicted RBP2.61□□□□□ -1.99
VPS16YPL045W SPS1P08458 490 aa2.61□□□□□ -1.99
VPS16YPL045W POL3P15436 1097 aa2.61□□□□□ -1.99
VPS16YPL045W GUK1P15454 187 aaKnown RBP2.61□□□□□ -1.99
VPS16YPL045W IME1P21190 360 aa2.61□□□□□ -1.99
VPS16YPL045W RSC6P25632 483 aa2.61□□□□□ -1.99
VPS16YPL045W TAF5P38129 798 aa2.61□□□□□ -1.99
VPS16YPL045W RKM3P38222 552 aa2.61□□□□□ -1.99
VPS16YPL045W IFA38P38286 347 aa2.61□□□□□ -1.99
VPS16YPL045W YEL068CP39977 110 aa2.61□□□□□ -1.99
VPS16YPL045W YER010CP40011 234 aa2.61□□□□□ -1.99
VPS16YPL045W OYE3P41816 400 aaPredicted RBP2.61□□□□□ -1.99
VPS16YPL045W CIT3P43635 486 aa2.61□□□□□ -1.99
VPS16YPL045W MNT2P53059 558 aa2.61□□□□□ -1.99
VPS16YPL045W RRT6P53117 311 aaPredicted RBP2.61□□□□□ -1.99
VPS16YPL045W YNR071CP53757 342 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms