RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C GCS1P35197 352 aa6.2□□□□□ -1.42
UBC11YOR339C VBA5P36172 582 aa6.2□□□□□ -1.42
UBC11YOR339C RFS1P38234 210 aaKnown RBP6.2□□□□□ -1.42
UBC11YOR339C MCX1P38323 520 aaPredicted RBP6.2□□□□□ -1.42
UBC11YOR339C CBR1P38626 284 aaKnown RBP6.2□□□□□ -1.42
UBC11YOR339C MSC7P38694 644 aa6.2□□□□□ -1.42
UBC11YOR339C SIP5P40210 489 aaKnown RBP6.2□□□□□ -1.42
UBC11YOR339C STU2P46675 888 aa6.2□□□□□ -1.42
UBC11YOR339C YGR021WP53212 290 aa6.2□□□□□ -1.42
UBC11YOR339C GPD1Q00055 391 aaKnown RBP6.2□□□□□ -1.42
UBC11YOR339C MUB1Q03162 620 aa6.2□□□□□ -1.42
UBC11YOR339C MZM1Q03429 123 aaPredicted RBP6.2□□□□□ -1.42
UBC11YOR339C DAS2Q12084 232 aa6.2□□□□□ -1.42
UBC11YOR339C AHC1Q12433 566 aa6.2□□□□□ -1.42
UBC11YOR339C GAL80P04387 435 aa6.19□□□□□ -1.42
UBC11YOR339C RPS3P05750 240 aaKnown RBP6.19□□□□□ -1.42
UBC11YOR339C TPK1P06244 397 aa6.19□□□□□ -1.42
UBC11YOR339C ERG11P10614 530 aa6.19□□□□□ -1.42
UBC11YOR339C VMA4P22203 233 aaKnown RBP6.19□□□□□ -1.42
UBC11YOR339C SAT4P25333 603 aaKnown RBP6.19□□□□□ -1.42
UBC11YOR339C HXT1P32465 570 aa6.19□□□□□ -1.42
UBC11YOR339C FRE1P32791 686 aa6.19□□□□□ -1.42
UBC11YOR339C PEX2P32800 271 aa6.19□□□□□ -1.42
UBC11YOR339C TCD1P38756 429 aa6.19□□□□□ -1.42
UBC11YOR339C CAJ1P39101 391 aa6.19□□□□□ -1.42
UBC11YOR339C YEL075CP39972 122 aa6.19□□□□□ -1.42
UBC11YOR339C YEL023CP39992 682 aa6.19□□□□□ -1.42
UBC11YOR339C DSE1P40077 573 aa6.19□□□□□ -1.42
UBC11YOR339C YFL052WP43551 465 aa6.19□□□□□ -1.42
UBC11YOR339C ASG7P46993 209 aa6.19□□□□□ -1.42
UBC11YOR339C YJR054WP47114 497 aa6.19□□□□□ -1.42
UBC11YOR339C MND1P53102 219 aa6.19□□□□□ -1.42
UBC11YOR339C SYH1Q02875 849 aaKnown RBP6.19□□□□□ -1.42
UBC11YOR339C DIG1Q03063 452 aaKnown RBP6.19□□□□□ -1.42
UBC11YOR339C YDR222WQ04925 415 aa6.19□□□□□ -1.42
UBC11YOR339C TRE1Q08919 783 aa6.19□□□□□ -1.42
UBC11YOR339C BI2P03873 423 aa6.18□□□□□ -1.42
UBC11YOR339C BI4P03879 638 aa6.18□□□□□ -1.42
UBC11YOR339C GAC1P28006 793 aa6.18□□□□□ -1.42
UBC11YOR339C SLA2P33338 968 aa6.18□□□□□ -1.42
UBC11YOR339C NOP4P37838 685 aaKnown RBP6.18□□□□□ -1.42
UBC11YOR339C NCL1P38205 684 aaKnown RBP6.18□□□□□ -1.42
UBC11YOR339C QNS1P38795 714 aaKnown RBP6.18□□□□□ -1.42
UBC11YOR339C FMP10P40098 244 aa6.18□□□□□ -1.42
UBC11YOR339C FAF1P40546 346 aaPredicted RBP6.18□□□□□ -1.42
UBC11YOR339C MCM6P53091 1017 aaKnown RBP6.18□□□□□ -1.42
UBC11YOR339C MET13P53128 600 aa6.18□□□□□ -1.42
UBC11YOR339C PUS2P53167 370 aa6.18□□□□□ -1.42
UBC11YOR339C YGR111WP53265 400 aa6.18□□□□□ -1.42
UBC11YOR339C BOP3P53958 396 aa6.18□□□□□ -1.42
UBC11YOR339C EAR1Q03212 550 aa6.18□□□□□ -1.42
UBC11YOR339C GYL1Q04322 720 aa6.18□□□□□ -1.42
UBC11YOR339C YMR018WQ04364 514 aa6.18□□□□□ -1.42
UBC11YOR339C ESC2Q06340 456 aa6.18□□□□□ -1.42
UBC11YOR339C VAC14Q06708 880 aa6.18□□□□□ -1.42
UBC11YOR339C SDH5Q08230 162 aa6.18□□□□□ -1.42
UBC11YOR339C MRN1Q08925 612 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
UBC11YOR339C BI3Q9ZZW7 517 aa6.18□□□□□ -1.42
UBC11YOR339C JIP3O13555 125 aa6.17□□□□□ -1.42
UBC11YOR339C LRE1P25579 583 aaKnown RBP6.17□□□□□ -1.42
UBC11YOR339C SRB4P32569 687 aa6.17□□□□□ -1.42
UBC11YOR339C MRP4P32902 394 aa6.17□□□□□ -1.42
UBC11YOR339C KDX1P36005 433 aa6.17□□□□□ -1.42
UBC11YOR339C HMT1P38074 348 aa6.17□□□□□ -1.42
UBC11YOR339C YMC2P38087 329 aa6.17□□□□□ -1.42
UBC11YOR339C YBR284WP38150 797 aa6.17□□□□□ -1.42
UBC11YOR339C YBL036CP38197 257 aa6.17□□□□□ -1.42
UBC11YOR339C SHE3P38272 425 aaKnown RBP6.17□□□□□ -1.42
UBC11YOR339C TDA3P38758 523 aa6.17□□□□□ -1.42
UBC11YOR339C TIF11P38912 153 aaKnown RBP6.17□□□□□ -1.42
UBC11YOR339C PSY2P40164 858 aa6.17□□□□□ -1.42
UBC11YOR339C RPT2P40327 437 aaKnown RBP6.17□□□□□ -1.42
UBC11YOR339C NUT1P53114 1132 aa6.17□□□□□ -1.42
UBC11YOR339C JJJ1P53863 590 aa6.17□□□□□ -1.42
UBC11YOR339C NGL3Q03210 505 aa6.17□□□□□ -1.42
UBC11YOR339C ARO80Q04052 950 aa6.17□□□□□ -1.42
UBC11YOR339C SML1Q04964 104 aa6.17□□□□□ -1.42
UBC11YOR339C MRI1Q06489 411 aaKnown RBP6.17□□□□□ -1.42
UBC11YOR339C YOL036WQ08206 761 aa6.17□□□□□ -1.42
UBC11YOR339C YOR059CQ08448 450 aaKnown RBP6.17□□□□□ -1.42
UBC11YOR339C VPS54Q12071 889 aa6.17□□□□□ -1.42
UBC11YOR339C MCM16Q12262 181 aa6.17□□□□□ -1.42
UBC11YOR339C KAR3P17119 729 aa6.16□□□□□ -1.42
UBC11YOR339C EST1P17214 699 aaPredicted RBP6.16□□□□□ -1.42
UBC11YOR339C CKI1P20485 582 aa6.16□□□□□ -1.42
UBC11YOR339C TKL2P33315 681 aa6.16□□□□□ -1.42
UBC11YOR339C BLI1P35727 113 aa6.16□□□□□ -1.42
UBC11YOR339C PCM1P38628 557 aaKnown RBP6.16□□□□□ -1.42
UBC11YOR339C INP52P50942 1183 aa6.16□□□□□ -1.42
UBC11YOR339C KAP114P53067 1004 aa6.16□□□□□ -1.42
UBC11YOR339C HOP2P53187 214 aa6.16□□□□□ -1.42
UBC11YOR339C BTN2P53286 410 aa6.16□□□□□ -1.42
UBC11YOR339C YNL011CP53980 444 aa6.16□□□□□ -1.42
UBC11YOR339C HEH2Q03281 663 aa6.16□□□□□ -1.42
UBC11YOR339C YML083CQ04526 418 aa6.16□□□□□ -1.42
UBC11YOR339C YDR278CQ05612 105 aa6.16□□□□□ -1.42
UBC11YOR339C DIS3Q08162 1001 aaKnown RBP6.16□□□□□ -1.42
UBC11YOR339C MDM38Q08179 573 aa6.16□□□□□ -1.42
UBC11YOR339C SAM3Q08986 587 aa6.16□□□□□ -1.42
UBC11YOR339C GPM2Q12008 311 aa6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms