RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C GPG1P53130 126 aa5.58□□□□□ -1.52
RPN8YOR261C UME1Q03010 460 aa5.58□□□□□ -1.52
RPN8YOR261C PRP19P32523 503 aaKnown RBP5.57□□□□□ -1.52
RPN8YOR261C HIS7P33734 552 aaKnown RBP5.57□□□□□ -1.52
RPN8YOR261C MAL31P38156 614 aa5.57□□□□□ -1.52
RPN8YOR261C YHL017WP38745 532 aa5.57□□□□□ -1.52
RPN8YOR261C FMO1P38866 432 aa5.57□□□□□ -1.52
RPN8YOR261C CCT3P39077 534 aaKnown RBP5.57□□□□□ -1.52
RPN8YOR261C NUP60P39705 539 aa5.57□□□□□ -1.52
RPN8YOR261C FMP52P40008 231 aa5.57□□□□□ -1.52
RPN8YOR261C GET2P40056 285 aa5.57□□□□□ -1.52
RPN8YOR261C RET2P43621 546 aa5.57□□□□□ -1.52
RPN8YOR261C NOP9P47077 666 aaKnown RBP5.57□□□□□ -1.52
RPN8YOR261C GPD1Q00055 391 aaKnown RBP5.57□□□□□ -1.52
RPN8YOR261C RGC1Q06108 1083 aaKnown RBP5.57□□□□□ -1.52
RPN8YOR261C SIR3P06701 978 aa5.56□□□□□ -1.52
RPN8YOR261C PYC1P11154 1178 aaKnown RBP5.56□□□□□ -1.52
RPN8YOR261C YNL195CP40168 261 aa5.56□□□□□ -1.52
RPN8YOR261C CCT5P40413 562 aaKnown RBP5.56□□□□□ -1.52
RPN8YOR261C DAS1P47005 663 aa5.56□□□□□ -1.52
RPN8YOR261C PEX1P24004 1043 aa5.55□□□□□ -1.52
RPN8YOR261C TDA3P38758 523 aa5.55□□□□□ -1.52
RPN8YOR261C UBP12P39538 1254 aa5.55□□□□□ -1.52
RPN8YOR261C GPP1P41277 250 aaKnown RBP5.55□□□□□ -1.52
RPN8YOR261C RIA1P53893 1110 aa5.55□□□□□ -1.52
RPN8YOR261C TMN2Q04562 672 aa5.55□□□□□ -1.52
RPN8YOR261C ISA1Q07821 250 aaPredicted RBP5.55□□□□□ -1.52
RPN8YOR261C SGO1Q08490 590 aa5.55□□□□□ -1.52
RPN8YOR261C MCH5Q08777 521 aa5.55□□□□□ -1.52
RPN8YOR261C YPT7P32939 208 aa5.54□□□□□ -1.52
RPN8YOR261C REV7P38927 245 aa5.54□□□□□ -1.52
RPN8YOR261C RSC8P43609 557 aaKnown RBP5.54□□□□□ -1.52
RPN8YOR261C YGR237CP50089 785 aa5.54□□□□□ -1.52
RPN8YOR261C YGL081WP53156 320 aa5.54□□□□□ -1.52
RPN8YOR261C ECM9Q02202 377 aa5.54□□□□□ -1.52
RPN8YOR261C MVD1P32377 396 aaKnown RBP5.53□□□□□ -1.52
RPN8YOR261C HRB1P38922 454 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
RPN8YOR261C HXT6P39003 570 aaKnown RBP5.53□□□□□ -1.52
RPN8YOR261C HXT7P39004 570 aa5.53□□□□□ -1.52
RPN8YOR261C GZF3P42944 551 aaKnown RBP5.53□□□□□ -1.52
RPN8YOR261C PAN2P53010 1115 aaPredicted RBP5.53□□□□□ -1.52
RPN8YOR261C TEL2P53038 688 aa5.53□□□□□ -1.52
RPN8YOR261C COX18P53239 316 aa5.53□□□□□ -1.52
RPN8YOR261C HFD1Q04458 532 aa5.53□□□□□ -1.52
RPN8YOR261C YTM1Q12024 460 aaPredicted RBP5.53□□□□□ -1.52
RPN8YOR261C YKL033W-AQ86ZR7 236 aa5.53□□□□□ -1.52
RPN8YOR261C NUP145P49687 1317 aa5.52□□□□□ -1.53
RPN8YOR261C PCL5P38794 229 aa5.52□□□□□ -1.53
RPN8YOR261C SFB3P38810 929 aa5.52□□□□□ -1.53
RPN8YOR261C OAF1P39720 1047 aaPredicted RBP5.52□□□□□ -1.53
RPN8YOR261C TIM44Q01852 431 aa5.52□□□□□ -1.53
RPN8YOR261C YLR407WQ06070 228 aa5.52□□□□□ -1.53
RPN8YOR261C VHS3Q08438 674 aa5.52□□□□□ -1.53
RPN8YOR261C RPS21BQ3E754 87 aaKnown RBP5.52□□□□□ -1.53
RPN8YOR261C ECM3Q99252 613 aa5.52□□□□□ -1.53
RPN8YOR261C SWI6P09959 803 aa5.51□□□□□ -1.53
RPN8YOR261C IMG2P25642 146 aaPredicted RBP5.51□□□□□ -1.53
RPN8YOR261C YKU70P32807 602 aa5.51□□□□□ -1.53
RPN8YOR261C SEC6P32844 805 aa5.51□□□□□ -1.53
RPN8YOR261C YKR075CP36155 307 aa5.51□□□□□ -1.53
RPN8YOR261C YGR153WP48238 217 aa5.51□□□□□ -1.53
RPN8YOR261C FHN1P53279 174 aa5.51□□□□□ -1.53
RPN8YOR261C YAP1802P53309 568 aa5.51□□□□□ -1.53
RPN8YOR261C SSL2Q00578 843 aa5.51□□□□□ -1.53
RPN8YOR261C THI22Q06490 572 aa5.51□□□□□ -1.53
RPN8YOR261C VPS36Q06696 566 aa5.51□□□□□ -1.53
RPN8YOR261C HBT1Q07653 1046 aaKnown RBP5.51□□□□□ -1.53
RPN8YOR261C DIA2Q08496 732 aaPredicted RBP5.51□□□□□ -1.53
RPN8YOR261C PET127P32606 800 aa5.5□□□□□ -1.53
RPN8YOR261C GRX4P32642 244 aa5.5□□□□□ -1.53
RPN8YOR261C MTH1P35198 433 aa5.5□□□□□ -1.53
RPN8YOR261C SDS3P40505 327 aa5.5□□□□□ -1.53
RPN8YOR261C MNN11P46985 422 aaKnown RBP5.5□□□□□ -1.53
RPN8YOR261C BFA1P47113 574 aa5.5□□□□□ -1.53
RPN8YOR261C UBA2P52488 636 aa5.5□□□□□ -1.53
RPN8YOR261C GND2P53319 492 aa5.5□□□□□ -1.53
RPN8YOR261C FAP7Q12055 197 aaPredicted RBP5.5□□□□□ -1.53
RPN8YOR261C HFI1Q12060 488 aa5.5□□□□□ -1.53
RPN8YOR261C MLH3Q12083 715 aa5.5□□□□□ -1.53
RPN8YOR261C ZRT2Q12436 422 aa5.5□□□□□ -1.53
RPN8YOR261C FRS1P15624 595 aaKnown RBP5.49□□□□□ -1.53
RPN8YOR261C BCS1P32839 456 aa5.49□□□□□ -1.53
RPN8YOR261C PHO11P35842 467 aa5.49□□□□□ -1.53
RPN8YOR261C PHO12P38693 467 aa5.49□□□□□ -1.53
RPN8YOR261C YMR210WQ03649 449 aa5.49□□□□□ -1.53
RPN8YOR261C YPS7Q06325 596 aa5.49□□□□□ -1.53
RPN8YOR261C SEC65P29478 273 aa5.48□□□□□ -1.53
RPN8YOR261C DID4P36108 232 aa5.48□□□□□ -1.53
RPN8YOR261C UBS1P38290 277 aa5.48□□□□□ -1.53
RPN8YOR261C BIT2P38346 545 aa5.48□□□□□ -1.53
RPN8YOR261C BIT61P47041 543 aa5.48□□□□□ -1.53
RPN8YOR261C SMX3P54999 86 aaPredicted RBP5.48□□□□□ -1.53
RPN8YOR261C RCR2Q03446 210 aaKnown RBP5.48□□□□□ -1.53
RPN8YOR261C IRC10Q08118 586 aa5.48□□□□□ -1.53
RPN8YOR261C POM34Q12445 299 aa5.48□□□□□ -1.53
RPN8YOR261C RPS21AP0C0V8 87 aaKnown RBP5.47□□□□□ -1.53
RPN8YOR261C IME1P21190 360 aa5.47□□□□□ -1.53
RPN8YOR261C OAF3P36023 863 aa5.47□□□□□ -1.53
RPN8YOR261C FAT1P38225 669 aa5.47□□□□□ -1.53
RPN8YOR261C CBR1P38626 284 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms