RNA–Protein interactions for RNA: YNR070W

PDR18, Transcript of Putative transporter of the ATP-binding cassette (ABC) family, yeast

Gene PDR18, Length 4,002 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR18	YNR070W	PXA1	P41909	870 aa		6.28	□□□□□ -1.4
PDR18	YNR070W	PEX21	P50091	288 aa		6.28	□□□□□ -1.4
PDR18	YNR070W	MRS2	Q01926	470 aa		6.28	□□□□□ -1.4
PDR18	YNR070W	FUS2	Q05670	677 aa		6.28	□□□□□ -1.4
PDR18	YNR070W	DUS4	Q06063	367 aa		6.28	□□□□□ -1.4
PDR18	YNR070W	VTA1	Q06263	330 aa		6.28	□□□□□ -1.4
PDR18	YNR070W	DDC1	Q08949	612 aa		6.28	□□□□□ -1.4
PDR18	YNR070W	SPE3	Q12074	293 aa	Known RBP	6.28	□□□□□ -1.4
PDR18	YNR070W	KIP1	P28742	1111 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	SEC21	P32074	935 aa	Known RBP	6.27	□□□□□ -1.41
PDR18	YNR070W	MEI5	P32489	222 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	HSP78	P33416	811 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	INP51	P40559	946 aa	Known RBP	6.27	□□□□□ -1.41
PDR18	YNR070W	EMW1	P42842	904 aa	Known RBP	6.27	□□□□□ -1.41
PDR18	YNR070W	UPF3	P48412	387 aa	Known RBP	6.27	□□□□□ -1.41
PDR18	YNR070W	VMA10	P48836	114 aa	Known RBP	6.27	□□□□□ -1.41
PDR18	YNR070W	GTB1	Q04924	702 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	PPR1	P07272	904 aa	Predicted RBP	6.27	□□□□□ -1.41
PDR18	YNR070W	AFT1	P22149	690 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	YCL068C	P25593	260 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	MEI4	P29467	408 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	PAP1	P29468	568 aa	Known RBP	6.27	□□□□□ -1.41
PDR18	YNR070W	VPS21	P36017	210 aa	Known RBP	6.27	□□□□□ -1.41
PDR18	YNR070W	PSY4	P38193	441 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	NDT80	P38830	627 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	MGS1	P40151	587 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	HFM1	P51979	1187 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	NUT1	P53114	1132 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	SHR3	Q02774	210 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	PPN1	Q04119	674 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	YLR053C	Q12026	108 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	NUR1	Q12066	484 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	HOS1	Q12214	470 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	PTC5	Q12511	572 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	ENO2	P00925	437 aa	Known RBP	6.27	□□□□□ -1.41
PDR18	YNR070W	ADE4	P04046	510 aa	Known RBP	6.27	□□□□□ -1.41
PDR18	YNR070W	PAH1	P32567	862 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	TDA3	P38758	523 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	CRP1	P38845	465 aa	Known RBP	6.27	□□□□□ -1.41
PDR18	YNR070W	FIS1	P40515	155 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	HST2	P53686	357 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	YMR027W	Q04371	470 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	PRM6	Q04705	352 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	CHS5	Q12114	671 aa	Known RBP	6.27	□□□□□ -1.41
PDR18	YNR070W	SNF2	P22082	1703 aa		6.27	□□□□□ -1.41
PDR18	YNR070W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	6.26	□□□□□ -1.41	not detected
PDR18	YNR070W	NAT1	P12945	854 aa	Known RBP	6.26	□□□□□ -1.41
PDR18	YNR070W	SNA3	P14359	133 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	NMT1	P14743	455 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	KAR4	P25583	335 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	GPI10	P30777	616 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	STE13	P33894	931 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	SMF2	P38778	549 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	STL1	P39932	569 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	AZR1	P50080	613 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	EEB1	Q02891	456 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	NHP10	Q03435	203 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	MSC2	Q03455	724 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	ENT2	Q05785	613 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	ACM1	Q08981	209 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	RAD3	P06839	778 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	NSP1	P14907	823 aa	Known RBP	6.26	□□□□□ -1.41
PDR18	YNR070W	TRK2	P28584	889 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	HSE1	P38753	452 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	6.26	□□□□□ -1.41	not detected
PDR18	YNR070W	HLJ1	P48353	224 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	YNL040W	P53960	456 aa	Predicted RBP	6.26	□□□□□ -1.41
PDR18	YNR070W	RSC4	Q02206	625 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	RLP24	Q07915	199 aa	Known RBP	6.26	□□□□□ -1.41
PDR18	YNR070W	APE1	P14904	514 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	YKR078W	P36158	585 aa	Known RBP	6.26	□□□□□ -1.41
PDR18	YNR070W	FRT2	P39734	528 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	CPR7	P47103	393 aa		6.26	□□□□□ -1.41
PDR18	YNR070W	MCM6	P53091	1017 aa	Known RBP	6.26	□□□□□ -1.41
PDR18	YNR070W	SPT15	P13393	240 aa	Known RBP	6.25	□□□□□ -1.41
PDR18	YNR070W	TRX1	P22217	103 aa	Known RBP	6.25	□□□□□ -1.41
PDR18	YNR070W	VAC17	P25591	423 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	SUV3	P32580	737 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	YME1	P32795	747 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	CSG2	P35206	410 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	EAP1	P36041	632 aa	Known RBP	6.25	□□□□□ -1.41
PDR18	YNR070W	NUP82	P40368	713 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	PRM2	P40534	656 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	HUL4	P40985	892 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	YNL260C	P53846	198 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	NSG2	P53898	299 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
PDR18	YNR070W	ECI1	Q05871	280 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	ALR1	Q08269	859 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	GCD2	P12754	651 aa	Predicted RBP	6.25	□□□□□ -1.41
PDR18	YNR070W	CLB4	P24871	460 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	SSE2	P32590	693 aa	Known RBP	6.25	□□□□□ -1.41
PDR18	YNR070W	RAD5	P32849	1169 aa	Predicted RBP	6.25	□□□□□ -1.41
PDR18	YNR070W	DIA4	P38705	446 aa	Predicted RBP	6.25	□□□□□ -1.41
PDR18	YNR070W	QNS1	P38795	714 aa	Known RBP	6.25	□□□□□ -1.41
PDR18	YNR070W	REF2	P42073	533 aa	Predicted RBP	6.25	□□□□□ -1.41
PDR18	YNR070W	ROG3	P43602	733 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	NOG1	Q02892	647 aa	Known RBP	6.25	□□□□□ -1.41
PDR18	YNR070W	ELP3	Q02908	557 aa	Known RBP	6.25	□□□□□ -1.41
PDR18	YNR070W	DNF3	Q12674	1656 aa		6.25	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms