RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C CCT7P42943 550 aaKnown RBP4.03□□□□□ -1.76
UBX4YMR067C ATG4P53867 494 aa4.03□□□□□ -1.76
UBX4YMR067C TUB1P09733 447 aaKnown RBP4.02□□□□□ -1.77
UBX4YMR067C PEX1P24004 1043 aa4.02□□□□□ -1.77
UBX4YMR067C ADY2P25613 283 aa4.02□□□□□ -1.77
UBX4YMR067C PCL2P25693 308 aa4.02□□□□□ -1.77
UBX4YMR067C PPZ2P33329 710 aa4.02□□□□□ -1.77
UBX4YMR067C CRP1P38845 465 aaKnown RBP4.02□□□□□ -1.77
UBX4YMR067C HRB1P38922 454 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
UBX4YMR067C GET2P40056 285 aa4.02□□□□□ -1.77
UBX4YMR067C CTR1P49573 406 aa4.02□□□□□ -1.77
UBX4YMR067C APM1Q00776 475 aaPredicted RBP4.02□□□□□ -1.77
UBX4YMR067C RAD18P10862 487 aa4.01□□□□□ -1.77
UBX4YMR067C ERG6P25087 383 aaKnown RBP4.01□□□□□ -1.77
UBX4YMR067C APN2P38207 520 aa4.01□□□□□ -1.77
UBX4YMR067C SSZ1P38788 538 aaKnown RBP4.01□□□□□ -1.77
UBX4YMR067C SET2P46995 733 aaKnown RBP4.01□□□□□ -1.77
UBX4YMR067C IMO32P53219 342 aa4.01□□□□□ -1.77
UBX4YMR067C ARP4P80428 489 aa4.01□□□□□ -1.77
UBX4YMR067C LGE1Q02796 332 aaKnown RBP4.01□□□□□ -1.77
UBX4YMR067C COQ11Q05892 277 aa4.01□□□□□ -1.77
UBX4YMR067C ATG33Q06485 197 aa4.01□□□□□ -1.77
UBX4YMR067C DIA2Q08496 732 aaPredicted RBP4.01□□□□□ -1.77
UBX4YMR067C ZRT2Q12436 422 aa4.01□□□□□ -1.77
UBX4YMR067C BNR1P40450 1375 aa4.01□□□□□ -1.77
UBX4YMR067C PCM1P38628 557 aaKnown RBP4□□□□□ -1.77
UBX4YMR067C RIX1P38883 763 aaPredicted RBP4□□□□□ -1.77
UBX4YMR067C NOP9P47077 666 aaKnown RBP4□□□□□ -1.77
UBX4YMR067C YJR039WP47107 1121 aa4□□□□□ -1.77
UBX4YMR067C UBC9P50623 157 aaPredicted RBP4□□□□□ -1.77
UBX4YMR067C ARO10Q06408 635 aa4□□□□□ -1.77
UBX4YMR067C THI22Q06490 572 aa4□□□□□ -1.77
UBX4YMR067C NTG2Q08214 380 aa4□□□□□ -1.77
UBX4YMR067C HMG1P12683 1054 aa3.99□□□□□ -1.77
UBX4YMR067C ABF1P14164 731 aa3.99□□□□□ -1.77
UBX4YMR067C THR1P17423 357 aaKnown RBP3.99□□□□□ -1.77
UBX4YMR067C SPO11P23179 398 aa3.99□□□□□ -1.77
UBX4YMR067C PRP28P23394 588 aa3.99□□□□□ -1.77
UBX4YMR067C CCR4P31384 837 aaKnown RBP3.99□□□□□ -1.77
UBX4YMR067C BIT2P38346 545 aa3.99□□□□□ -1.77
UBX4YMR067C YEL020CP39994 560 aa3.99□□□□□ -1.77
UBX4YMR067C BRE5P53741 515 aaKnown RBP3.99□□□□□ -1.77
UBX4YMR067C MLH3Q12083 715 aa3.99□□□□□ -1.77
UBX4YMR067C YNL162W-AQ3E7A8 72 aa3.99□□□□□ -1.77
UBX4YMR067C SFL1P20134 766 aa3.98□□□□□ -1.77
UBX4YMR067C SEC6P32844 805 aa3.98□□□□□ -1.77
UBX4YMR067C RRP14P36080 434 aaKnown RBP3.98□□□□□ -1.77
UBX4YMR067C UBS1P38290 277 aa3.98□□□□□ -1.77
UBX4YMR067C PIG2P40187 538 aa3.98□□□□□ -1.77
UBX4YMR067C RSC8P43609 557 aaKnown RBP3.98□□□□□ -1.77
UBX4YMR067C MRK1P50873 501 aa3.98□□□□□ -1.77
UBX4YMR067C COX18P53239 316 aa3.98□□□□□ -1.77
UBX4YMR067C USV1Q12132 391 aa3.98□□□□□ -1.77
UBX4YMR067C GIN4Q12263 1142 aa3.98□□□□□ -1.77
UBX4YMR067C MNN4P36044 1178 aa3.97□□□□□ -1.77
UBX4YMR067C MAL31P38156 614 aa3.97□□□□□ -1.77
UBX4YMR067C GPD1Q00055 391 aaKnown RBP3.97□□□□□ -1.77
UBX4YMR067C YLR001CQ07895 862 aa3.97□□□□□ -1.77
UBX4YMR067C BMS1Q08965 1183 aaKnown RBP3.97□□□□□ -1.77
UBX4YMR067C ECM3Q99252 613 aa3.97□□□□□ -1.77
UBX4YMR067C ERG20P08524 352 aaKnown RBP3.96□□□□□ -1.78
UBX4YMR067C FUB1P25659 250 aa3.96□□□□□ -1.78
UBX4YMR067C EMP70P32802 667 aa3.96□□□□□ -1.78
UBX4YMR067C BCS1P32839 456 aa3.96□□□□□ -1.78
UBX4YMR067C GMH1P36125 273 aa3.96□□□□□ -1.78
UBX4YMR067C FLO10P36170 1169 aa3.96□□□□□ -1.78
UBX4YMR067C AKL1P38080 1108 aaKnown RBP3.96□□□□□ -1.78
UBX4YMR067C MUP3P38734 546 aa3.96□□□□□ -1.78
UBX4YMR067C AIM14P53109 570 aa3.96□□□□□ -1.78
UBX4YMR067C LEE1Q02799 301 aaKnown RBP3.96□□□□□ -1.78
UBX4YMR067C RGC1Q06108 1083 aaKnown RBP3.96□□□□□ -1.78
UBX4YMR067C DCS2Q12123 353 aa3.96□□□□□ -1.78
UBX4YMR067C KCC4P25389 1037 aa3.95□□□□□ -1.78
UBX4YMR067C SET3P36124 751 aa3.95□□□□□ -1.78
UBX4YMR067C PAC2P39937 518 aa3.95□□□□□ -1.78
UBX4YMR067C GUD1Q07729 489 aa3.95□□□□□ -1.78
UBX4YMR067C CHS5Q12114 671 aaKnown RBP3.95□□□□□ -1.78
UBX4YMR067C NTH1P32356 751 aa3.94□□□□□ -1.78
UBX4YMR067C PET127P32606 800 aa3.94□□□□□ -1.78
UBX4YMR067C PEX2P32800 271 aa3.94□□□□□ -1.78
UBX4YMR067C YGR151CP53287 111 aa3.94□□□□□ -1.78
UBX4YMR067C TFB2Q02939 513 aa3.94□□□□□ -1.78
UBX4YMR067C ISA1Q07821 250 aaPredicted RBP3.94□□□□□ -1.78
UBX4YMR067C POM34Q12445 299 aa3.94□□□□□ -1.78
UBX4YMR067C KIN82P25341 720 aa3.93□□□□□ -1.78
UBX4YMR067C FEN2P25621 512 aaKnown RBP3.93□□□□□ -1.78
UBX4YMR067C YPT7P32939 208 aa3.93□□□□□ -1.78
UBX4YMR067C YKR075CP36155 307 aa3.93□□□□□ -1.78
UBX4YMR067C CTP1P38152 299 aa3.93□□□□□ -1.78
UBX4YMR067C YHR202WP38887 602 aa3.93□□□□□ -1.78
UBX4YMR067C BEM4P39011 633 aa3.93□□□□□ -1.78
UBX4YMR067C MGS1P40151 587 aa3.93□□□□□ -1.78
UBX4YMR067C YNL195CP40168 261 aa3.93□□□□□ -1.78
UBX4YMR067C YNL193WP53870 558 aa3.93□□□□□ -1.78
UBX4YMR067C YSH1Q06224 779 aaPredicted RBP3.93□□□□□ -1.78
UBX4YMR067C SEC15P22224 910 aa3.92□□□□□ -1.78
UBX4YMR067C NUG1P40010 520 aaKnown RBP3.92□□□□□ -1.78
UBX4YMR067C BIT61P47041 543 aa3.92□□□□□ -1.78
UBX4YMR067C MPS3P47069 682 aa3.92□□□□□ -1.78
UBX4YMR067C MET13P53128 600 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms