RNA–Protein interactions for RNA: YLR340W

RPP0, Transcript of Conserved ribosomal protein P0 of the ribosomal stalk, yeastyeast

Gene RPP0, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP0YLR340W CTF3Q12748 733 aa5.09□□□□□ -1.59
RPP0YLR340W TUF1P02992 437 aaKnown RBP5.08□□□□□ -1.6
RPP0YLR340W YEL076C-AP0CX16 216 aa5.08□□□□□ -1.6
RPP0YLR340W YLR464WP0CX17 216 aa5.08□□□□□ -1.6
RPP0YLR340W MTF1P14908 341 aaKnown RBP5.08□□□□□ -1.6
RPP0YLR340W FRS2P15625 503 aaKnown RBP5.08□□□□□ -1.6
RPP0YLR340W CBP3P21560 335 aa5.08□□□□□ -1.6
RPP0YLR340W PPH22P23595 377 aa5.08□□□□□ -1.6
RPP0YLR340W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
RPP0YLR340W GPI10P30777 616 aa5.08□□□□□ -1.6
RPP0YLR340W ASF1P32447 279 aa5.08□□□□□ -1.6
RPP0YLR340W YSC83P32792 385 aa5.08□□□□□ -1.6
RPP0YLR340W SLA2P33338 968 aa5.08□□□□□ -1.6
RPP0YLR340W SIF2P38262 535 aa5.08□□□□□ -1.6
RPP0YLR340W YEL076CP39971 216 aa5.08□□□□□ -1.6
RPP0YLR340W BIM1P40013 344 aa5.08□□□□□ -1.6
RPP0YLR340W IES1P43579 692 aa5.08□□□□□ -1.6
RPP0YLR340W VTC2P43585 828 aa5.08□□□□□ -1.6
RPP0YLR340W SCD6P45978 349 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
RPP0YLR340W VPS25P47142 202 aa5.08□□□□□ -1.6
RPP0YLR340W UTP8P53276 713 aaKnown RBP5.08□□□□□ -1.6
RPP0YLR340W CBK1P53894 756 aa5.08□□□□□ -1.6
RPP0YLR340W ISU1Q03020 165 aa5.08□□□□□ -1.6
RPP0YLR340W ADY4Q05955 493 aa5.08□□□□□ -1.6
RPP0YLR340W BSP1Q06604 576 aa5.08□□□□□ -1.6
RPP0YLR340W FRA1Q07825 749 aa5.08□□□□□ -1.6
RPP0YLR340W HRT3Q12347 344 aa5.08□□□□□ -1.6
RPP0YLR340W TAF13P11747 167 aa5.07□□□□□ -1.6
RPP0YLR340W PFK1P16861 987 aaKnown RBP5.07□□□□□ -1.6
RPP0YLR340W RAD16P31244 790 aa5.07□□□□□ -1.6
RPP0YLR340W PDR3P33200 976 aa5.07□□□□□ -1.6
RPP0YLR340W MNN4P36044 1178 aa5.07□□□□□ -1.6
RPP0YLR340W YBL036CP38197 257 aa5.07□□□□□ -1.6
RPP0YLR340W YHR054CP38780 354 aa5.07□□□□□ -1.6
RPP0YLR340W GIP4P39732 760 aa5.07□□□□□ -1.6
RPP0YLR340W NUP82P40368 713 aa5.07□□□□□ -1.6
RPP0YLR340W KRI1P42846 591 aaKnown RBP5.07□□□□□ -1.6
RPP0YLR340W RMD8P43620 662 aa5.07□□□□□ -1.6
RPP0YLR340W ENT3P47160 408 aa5.07□□□□□ -1.6
RPP0YLR340W TY1A-MR1Q04215 440 aa5.07□□□□□ -1.6
RPP0YLR340W YLR407WQ06070 228 aa5.07□□□□□ -1.6
RPP0YLR340W CDD1Q06549 142 aa5.07□□□□□ -1.6
RPP0YLR340W YOR296WQ08748 1289 aa5.07□□□□□ -1.6
RPP0YLR340W TPK1P06244 397 aa5.06□□□□□ -1.6
RPP0YLR340W SWE1P32944 819 aa5.06□□□□□ -1.6
RPP0YLR340W TCD2P36101 447 aaKnown RBP5.06□□□□□ -1.6
RPP0YLR340W YKR051WP36142 418 aa5.06□□□□□ -1.6
RPP0YLR340W YBR056WP38081 501 aa5.06□□□□□ -1.6
RPP0YLR340W PCF11P39081 626 aaPredicted RBP5.06□□□□□ -1.6
RPP0YLR340W BTT1P40314 149 aaPredicted RBP5.06□□□□□ -1.6
RPP0YLR340W ASN1P49089 572 aaKnown RBP5.06□□□□□ -1.6
RPP0YLR340W NMA2P53204 395 aa5.06□□□□□ -1.6
RPP0YLR340W TOF1P53840 1238 aa5.06□□□□□ -1.6
RPP0YLR340W TIF35Q04067 274 aaKnown RBP5.06□□□□□ -1.6
RPP0YLR340W JIP5Q06214 492 aaPredicted RBP5.06□□□□□ -1.6
RPP0YLR340W YDL057WQ07379 328 aa5.06□□□□□ -1.6
RPP0YLR340W GET3Q12154 354 aaKnown RBP5.06□□□□□ -1.6
RPP0YLR340W CCP1P00431 361 aa5.05□□□□□ -1.6
RPP0YLR340W ALG1P16661 449 aa5.05□□□□□ -1.6
RPP0YLR340W CKA2P19454 339 aa5.05□□□□□ -1.6
RPP0YLR340W TSA1P34760 196 aaKnown RBP5.05□□□□□ -1.6
RPP0YLR340W GIP1P38229 639 aa5.05□□□□□ -1.6
RPP0YLR340W TIF5P38431 405 aaKnown RBP5.05□□□□□ -1.6
RPP0YLR340W DOT6P40059 670 aaKnown RBP5.05□□□□□ -1.6
RPP0YLR340W GUP1P53154 560 aa5.05□□□□□ -1.6
RPP0YLR340W NOP13P53883 403 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
RPP0YLR340W SEC5P89102 971 aa5.05□□□□□ -1.6
RPP0YLR340W CUR1Q06469 252 aa5.05□□□□□ -1.6
RPP0YLR340W FLC1Q08967 793 aa5.05□□□□□ -1.6
RPP0YLR340W TAF10Q12030 206 aa5.05□□□□□ -1.6
RPP0YLR340W MEC1P38111 2368 aa5.04□□□□□ -1.6
RPP0YLR340W HSP82P02829 709 aaKnown RBP5.04□□□□□ -1.6
RPP0YLR340W TRL1P09880 827 aaKnown RBP5.04□□□□□ -1.6
RPP0YLR340W ASP3-2P0CX77 362 aa5.04□□□□□ -1.6
RPP0YLR340W ASP3-3P0CX78 362 aa5.04□□□□□ -1.6
RPP0YLR340W ASP3-4P0CX79 362 aa5.04□□□□□ -1.6
RPP0YLR340W ASP3-1P0CZ17 362 aa5.04□□□□□ -1.6
RPP0YLR340W SSB1P11484 613 aaKnown RBP5.04□□□□□ -1.6
RPP0YLR340W PDC6P26263 563 aaKnown RBP5.04□□□□□ -1.6
RPP0YLR340W GAC1P28006 793 aa5.04□□□□□ -1.6
RPP0YLR340W MET4P32389 672 aa5.04□□□□□ -1.6
RPP0YLR340W CSE1P33307 960 aa5.04□□□□□ -1.6
RPP0YLR340W PET10P36139 283 aa5.04□□□□□ -1.6
RPP0YLR340W TBS1P38114 1094 aa5.04□□□□□ -1.6
RPP0YLR340W UBP13P38187 747 aa5.04□□□□□ -1.6
RPP0YLR340W SSB2P40150 613 aaKnown RBP5.04□□□□□ -1.6
RPP0YLR340W CUE3P53137 624 aaKnown RBP5.04□□□□□ -1.6
RPP0YLR340W KRE33P53914 1056 aaKnown RBP5.04□□□□□ -1.6
RPP0YLR340W NAM8Q00539 523 aaKnown RBP5.04□□□□□ -1.6
RPP0YLR340W EIS1Q05050 843 aaKnown RBP5.04□□□□□ -1.6
RPP0YLR340W DCS2Q12123 353 aa5.04□□□□□ -1.6
RPP0YLR340W NDJ1Q12366 352 aa5.04□□□□□ -1.6
RPP0YLR340W NBL1Q3E7Y6 73 aa5.04□□□□□ -1.6
RPP0YLR340W POL2P21951 2222 aaKnown RBP5.04□□□□□ -1.6
RPP0YLR340W HSF1P10961 833 aa5.03□□□□□ -1.6
RPP0YLR340W FPR1P20081 114 aaKnown RBP5.03□□□□□ -1.6
RPP0YLR340W STE5P32917 917 aa5.03□□□□□ -1.6
RPP0YLR340W UTH1P36135 365 aa5.03□□□□□ -1.6
RPP0YLR340W AGP2P38090 596 aa5.03□□□□□ -1.6
RPP0YLR340W GGA2P38817 585 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms