RNA–Protein interactions for RNA: YLR176C

RFX1, Transcript of Major transcriptional repressor of DNA-damage-regulated genes, yeastyeast

Gene RFX1, Length 2,436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFX1YLR176C MCH5Q08777 521 aa2.3□□□□□ -2.04
RFX1YLR176C HIR1P32479 840 aa2.3□□□□□ -2.04
RFX1YLR176C YHL017WP38745 532 aa2.3□□□□□ -2.04
RFX1YLR176C PCL5P38794 229 aa2.3□□□□□ -2.04
RFX1YLR176C YHR202WP38887 602 aa2.3□□□□□ -2.04
RFX1YLR176C FMP52P40008 231 aa2.3□□□□□ -2.04
RFX1YLR176C NUG1P40010 520 aaKnown RBP2.3□□□□□ -2.04
RFX1YLR176C GET2P40056 285 aa2.3□□□□□ -2.04
RFX1YLR176C RET2P43621 546 aa2.3□□□□□ -2.04
RFX1YLR176C PMT3P47190 753 aa2.3□□□□□ -2.04
RFX1YLR176C UBA2P52488 636 aa2.3□□□□□ -2.04
RFX1YLR176C GPD1Q00055 391 aaKnown RBP2.3□□□□□ -2.04
RFX1YLR176C UME1Q03010 460 aa2.3□□□□□ -2.04
RFX1YLR176C MTQ2Q03920 221 aaPredicted RBP2.3□□□□□ -2.04
RFX1YLR176C RGC1Q06108 1083 aaKnown RBP2.3□□□□□ -2.04
RFX1YLR176C ISA1Q07821 250 aaPredicted RBP2.3□□□□□ -2.04
RFX1YLR176C ECM3Q99252 613 aa2.3□□□□□ -2.04
RFX1YLR176C YKR075CP36155 307 aa2.29□□□□□ -2.04
RFX1YLR176C AKL1P38080 1108 aaKnown RBP2.29□□□□□ -2.04
RFX1YLR176C MAL31P38156 614 aa2.29□□□□□ -2.04
RFX1YLR176C SFB3P38810 929 aa2.29□□□□□ -2.04
RFX1YLR176C REV7P38927 245 aa2.29□□□□□ -2.04
RFX1YLR176C NUP60P39705 539 aa2.29□□□□□ -2.04
RFX1YLR176C NOP9P47077 666 aaKnown RBP2.29□□□□□ -2.04
RFX1YLR176C PAN2P53010 1115 aaPredicted RBP2.29□□□□□ -2.04
RFX1YLR176C TEL2P53038 688 aa2.29□□□□□ -2.04
RFX1YLR176C RIA1P53893 1110 aa2.29□□□□□ -2.04
RFX1YLR176C TIM44Q01852 431 aa2.29□□□□□ -2.04
RFX1YLR176C HMO1Q03973 246 aaKnown RBP2.29□□□□□ -2.04
RFX1YLR176C TMN2Q04562 672 aa2.29□□□□□ -2.04
RFX1YLR176C SGO1Q08490 590 aa2.29□□□□□ -2.04
RFX1YLR176C BFA1P47113 574 aa2.29□□□□□ -2.04
RFX1YLR176C YGR153WP48238 217 aa2.29□□□□□ -2.04
RFX1YLR176C YGR237CP50089 785 aa2.29□□□□□ -2.04
RFX1YLR176C HBT1Q07653 1046 aaKnown RBP2.29□□□□□ -2.04
RFX1YLR176C CBR1P38626 284 aaKnown RBP2.28□□□□□ -2.04
RFX1YLR176C HRB1P38922 454 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
RFX1YLR176C GPG1P53130 126 aa2.28□□□□□ -2.04
RFX1YLR176C GND2P53319 492 aa2.28□□□□□ -2.04
RFX1YLR176C YKL033W-AQ86ZR7 236 aa2.28□□□□□ -2.04
RFX1YLR176C SIR3P06701 978 aa2.28□□□□□ -2.04
RFX1YLR176C IMG2P25642 146 aaPredicted RBP2.28□□□□□ -2.04
RFX1YLR176C BEM4P39011 633 aa2.28□□□□□ -2.04
RFX1YLR176C RSC8P43609 557 aaKnown RBP2.28□□□□□ -2.04
RFX1YLR176C SSL2Q00578 843 aa2.28□□□□□ -2.04
RFX1YLR176C YMR210WQ03649 449 aa2.28□□□□□ -2.04
RFX1YLR176C YLR407WQ06070 228 aa2.28□□□□□ -2.04
RFX1YLR176C VPS36Q06696 566 aa2.28□□□□□ -2.04
RFX1YLR176C VHS3Q08438 674 aa2.28□□□□□ -2.04
RFX1YLR176C FAP7Q12055 197 aaPredicted RBP2.28□□□□□ -2.04
RFX1YLR176C RPS21BQ3E754 87 aaKnown RBP2.28□□□□□ -2.04
RFX1YLR176C PEX1P24004 1043 aa2.27□□□□□ -2.05
RFX1YLR176C YKU70P32807 602 aa2.27□□□□□ -2.05
RFX1YLR176C PHO11P35842 467 aa2.27□□□□□ -2.05
RFX1YLR176C PHO12P38693 467 aa2.27□□□□□ -2.05
RFX1YLR176C CCT5P40413 562 aaKnown RBP2.27□□□□□ -2.05
RFX1YLR176C SDS3P40505 327 aa2.27□□□□□ -2.05
RFX1YLR176C GPP1P41277 250 aaKnown RBP2.27□□□□□ -2.05
RFX1YLR176C ECM9Q02202 377 aa2.27□□□□□ -2.05
RFX1YLR176C HFD1Q04458 532 aa2.27□□□□□ -2.05
RFX1YLR176C DIA2Q08496 732 aaPredicted RBP2.27□□□□□ -2.05
RFX1YLR176C YTM1Q12024 460 aaPredicted RBP2.27□□□□□ -2.05
RFX1YLR176C ZRT2Q12436 422 aa2.27□□□□□ -2.05
RFX1YLR176C MTH1P35198 433 aa2.27□□□□□ -2.05
RFX1YLR176C HXT6P39003 570 aaKnown RBP2.27□□□□□ -2.05
RFX1YLR176C HXT7P39004 570 aa2.27□□□□□ -2.05
RFX1YLR176C UBP12P39538 1254 aa2.27□□□□□ -2.05
RFX1YLR176C OAF1P39720 1047 aaPredicted RBP2.27□□□□□ -2.05
RFX1YLR176C GZF3P42944 551 aaKnown RBP2.27□□□□□ -2.05
RFX1YLR176C YAP1802P53309 568 aa2.27□□□□□ -2.05
RFX1YLR176C YHM2Q04013 314 aa2.27□□□□□ -2.05
RFX1YLR176C THI22Q06490 572 aa2.27□□□□□ -2.05
RFX1YLR176C MLH3Q12083 715 aa2.27□□□□□ -2.05
RFX1YLR176C MRH1Q12117 320 aaPredicted RBP2.27□□□□□ -2.05
RFX1YLR176C ERG20P08524 352 aaKnown RBP2.26□□□□□ -2.05
RFX1YLR176C SWI6P09959 803 aa2.26□□□□□ -2.05
RFX1YLR176C FRS1P15624 595 aaKnown RBP2.26□□□□□ -2.05
RFX1YLR176C SEC65P29478 273 aa2.26□□□□□ -2.05
RFX1YLR176C BCS1P32839 456 aa2.26□□□□□ -2.05
RFX1YLR176C YEN1P40028 759 aa2.26□□□□□ -2.05
RFX1YLR176C FHN1P53279 174 aa2.26□□□□□ -2.05
RFX1YLR176C SMX3P54999 86 aaPredicted RBP2.26□□□□□ -2.05
RFX1YLR176C RCR2Q03446 210 aaKnown RBP2.26□□□□□ -2.05
RFX1YLR176C YPS7Q06325 596 aa2.26□□□□□ -2.05
RFX1YLR176C RPS21AP0C0V8 87 aaKnown RBP2.26□□□□□ -2.05
RFX1YLR176C PET127P32606 800 aa2.26□□□□□ -2.05
RFX1YLR176C BIT2P38346 545 aa2.26□□□□□ -2.05
RFX1YLR176C PIG2P40187 538 aa2.26□□□□□ -2.05
RFX1YLR176C STU2P46675 888 aa2.26□□□□□ -2.05
RFX1YLR176C MNN11P46985 422 aaKnown RBP2.26□□□□□ -2.05
RFX1YLR176C BIT61P47041 543 aa2.26□□□□□ -2.05
RFX1YLR176C YGL081WP53156 320 aa2.26□□□□□ -2.05
RFX1YLR176C IRC10Q08118 586 aa2.26□□□□□ -2.05
RFX1YLR176C USV1Q12132 391 aa2.26□□□□□ -2.05
RFX1YLR176C POM34Q12445 299 aa2.26□□□□□ -2.05
RFX1YLR176C TAD3Q9URQ3 322 aa2.26□□□□□ -2.05
RFX1YLR176C RPS17AP02407 136 aaKnown RBP2.25□□□□□ -2.05
RFX1YLR176C RPS17BP14127 136 aaKnown RBP2.25□□□□□ -2.05
RFX1YLR176C THR1P17423 357 aaKnown RBP2.25□□□□□ -2.05
RFX1YLR176C FEN2P25621 512 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms