RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W VPS73P53142 486 aaKnown RBP2.44□□□□□ -2.02
CFT2YLR115W LEE1Q02799 301 aaKnown RBP2.44□□□□□ -2.02
CFT2YLR115W YML122CQ03207 126 aa2.44□□□□□ -2.02
CFT2YLR115W MSH2P25847 964 aa2.43□□□□□ -2.02
CFT2YLR115W HIS7P33734 552 aaKnown RBP2.43□□□□□ -2.02
CFT2YLR115W YKR018CP36114 725 aa2.43□□□□□ -2.02
CFT2YLR115W CCT3P39077 534 aaKnown RBP2.43□□□□□ -2.02
CFT2YLR115W CCT7P42943 550 aaKnown RBP2.43□□□□□ -2.02
CFT2YLR115W TAH11P47112 604 aa2.43□□□□□ -2.02
CFT2YLR115W PAN2P53010 1115 aaPredicted RBP2.43□□□□□ -2.02
CFT2YLR115W PHO8P11491 566 aa2.43□□□□□ -2.02
CFT2YLR115W HOG1P32485 435 aa2.43□□□□□ -2.02
CFT2YLR115W TOM20P35180 183 aa2.43□□□□□ -2.02
CFT2YLR115W TDP1P38319 544 aa2.43□□□□□ -2.02
CFT2YLR115W NUP60P39705 539 aa2.43□□□□□ -2.02
CFT2YLR115W GET2P40056 285 aa2.43□□□□□ -2.02
CFT2YLR115W FHN1P53279 174 aa2.43□□□□□ -2.02
CFT2YLR115W BUD21Q08492 214 aaPredicted RBP2.43□□□□□ -2.02
CFT2YLR115W YLR125WQ12138 136 aa2.43□□□□□ -2.02
CFT2YLR115W TAF3Q12297 353 aa2.43□□□□□ -2.02
CFT2YLR115W PYC1P11154 1178 aaKnown RBP2.42□□□□□ -2.02
CFT2YLR115W PCL2P25693 308 aa2.42□□□□□ -2.02
CFT2YLR115W FLO10P36170 1169 aa2.42□□□□□ -2.02
CFT2YLR115W FPR3P38911 411 aaKnown RBP2.42□□□□□ -2.02
CFT2YLR115W ATF1P40353 525 aa2.42□□□□□ -2.02
CFT2YLR115W NPY1P53164 384 aa2.42□□□□□ -2.02
CFT2YLR115W YBP2P53169 641 aa2.42□□□□□ -2.02
CFT2YLR115W SSL2Q00578 843 aa2.42□□□□□ -2.02
CFT2YLR115W NHX1Q04121 633 aa2.42□□□□□ -2.02
CFT2YLR115W MCM21Q06675 368 aa2.42□□□□□ -2.02
CFT2YLR115W YKL033W-AQ86ZR7 236 aa2.42□□□□□ -2.02
CFT2YLR115W TSR4P25040 408 aa2.42□□□□□ -2.02
CFT2YLR115W EMP70P32802 667 aa2.42□□□□□ -2.02
CFT2YLR115W UGO1Q03327 502 aa2.42□□□□□ -2.02
CFT2YLR115W MLH3Q12083 715 aa2.42□□□□□ -2.02
CFT2YLR115W BNR1P40450 1375 aa2.42□□□□□ -2.02
CFT2YLR115W HSL7P38274 827 aa2.41□□□□□ -2.02
CFT2YLR115W SFB3P38810 929 aa2.41□□□□□ -2.02
CFT2YLR115W RPN10P38886 268 aaKnown RBP2.41□□□□□ -2.02
CFT2YLR115W YFL052WP43551 465 aa2.41□□□□□ -2.02
CFT2YLR115W UBC9P50623 157 aaPredicted RBP2.41□□□□□ -2.02
CFT2YLR115W CTK1Q03957 528 aaKnown RBP2.41□□□□□ -2.02
CFT2YLR115W RPN7Q06103 429 aaKnown RBP2.41□□□□□ -2.02
CFT2YLR115W RNR1P21524 888 aaKnown RBP2.41□□□□□ -2.02
CFT2YLR115W SEC6P32844 805 aa2.41□□□□□ -2.02
CFT2YLR115W PHO11P35842 467 aa2.41□□□□□ -2.02
CFT2YLR115W CUE2P36075 443 aaKnown RBP2.41□□□□□ -2.02
CFT2YLR115W TRZ1P36159 838 aaPredicted RBP2.41□□□□□ -2.02
CFT2YLR115W PHO12P38693 467 aa2.41□□□□□ -2.02
CFT2YLR115W REV7P38927 245 aa2.41□□□□□ -2.02
CFT2YLR115W DSS1P39112 969 aa2.41□□□□□ -2.02
CFT2YLR115W PCL10P53124 433 aa2.41□□□□□ -2.02
CFT2YLR115W YAP1802P53309 568 aa2.41□□□□□ -2.02
CFT2YLR115W BRE5P53741 515 aaKnown RBP2.41□□□□□ -2.02
CFT2YLR115W ORC4P54791 529 aa2.41□□□□□ -2.02
CFT2YLR115W KIN3P22209 435 aa2.4□□□□□ -2.02
CFT2YLR115W GSY1P23337 708 aa2.4□□□□□ -2.02
CFT2YLR115W MVD1P32377 396 aaKnown RBP2.4□□□□□ -2.02
CFT2YLR115W PEX6P33760 1030 aa2.4□□□□□ -2.02
CFT2YLR115W CBR1P38626 284 aaKnown RBP2.4□□□□□ -2.02
CFT2YLR115W PCM1P38628 557 aaKnown RBP2.4□□□□□ -2.02
CFT2YLR115W RNH70P53331 553 aa2.4□□□□□ -2.02
CFT2YLR115W ATG33Q06485 197 aa2.4□□□□□ -2.02
CFT2YLR115W NDJ1Q12366 352 aa2.4□□□□□ -2.02
CFT2YLR115W GFA1P14742 717 aaKnown RBP2.4□□□□□ -2.03
CFT2YLR115W CCR4P31384 837 aaKnown RBP2.4□□□□□ -2.03
CFT2YLR115W THI4P32318 326 aa2.4□□□□□ -2.03
CFT2YLR115W YJL206CP39529 758 aa2.4□□□□□ -2.03
CFT2YLR115W NOP9P47077 666 aaKnown RBP2.4□□□□□ -2.03
CFT2YLR115W AIM14P53109 570 aa2.4□□□□□ -2.03
CFT2YLR115W YLR001CQ07895 862 aa2.4□□□□□ -2.03
CFT2YLR115W NTG2Q08214 380 aa2.4□□□□□ -2.03
CFT2YLR115W RAD18P10862 487 aa2.39□□□□□ -2.03
CFT2YLR115W HMG1P12683 1054 aa2.39□□□□□ -2.03
CFT2YLR115W THR1P17423 357 aaKnown RBP2.39□□□□□ -2.03
CFT2YLR115W YPT7P32939 208 aa2.39□□□□□ -2.03
CFT2YLR115W SSZ1P38788 538 aaKnown RBP2.39□□□□□ -2.03
CFT2YLR115W RIX1P38883 763 aaPredicted RBP2.39□□□□□ -2.03
CFT2YLR115W YNL195CP40168 261 aa2.39□□□□□ -2.03
CFT2YLR115W NDC80P40460 691 aa2.39□□□□□ -2.03
CFT2YLR115W ATG36P46983 293 aa2.39□□□□□ -2.03
CFT2YLR115W REC102Q02721 264 aa2.39□□□□□ -2.03
CFT2YLR115W LGE1Q02796 332 aaKnown RBP2.39□□□□□ -2.03
CFT2YLR115W DCS2Q12123 353 aa2.39□□□□□ -2.03
CFT2YLR115W MET6P05694 767 aaKnown RBP2.39□□□□□ -2.03
CFT2YLR115W PEX1P24004 1043 aa2.39□□□□□ -2.03
CFT2YLR115W ADY2P25613 283 aa2.39□□□□□ -2.03
CFT2YLR115W YEL1P34225 687 aa2.39□□□□□ -2.03
CFT2YLR115W SET3P36124 751 aa2.39□□□□□ -2.03
CFT2YLR115W NOP2P40991 618 aaKnown RBP2.39□□□□□ -2.03
CFT2YLR115W THI22Q06490 572 aa2.39□□□□□ -2.03
CFT2YLR115W CHD1P32657 1468 aa2.38□□□□□ -2.03
CFT2YLR115W YPK9Q12697 1472 aa2.38□□□□□ -2.03
CFT2YLR115W SFL1P20134 766 aa2.38□□□□□ -2.03
CFT2YLR115W AKL1P38080 1108 aaKnown RBP2.38□□□□□ -2.03
CFT2YLR115W YJR039WP47107 1121 aa2.38□□□□□ -2.03
CFT2YLR115W POB3Q04636 552 aaKnown RBP2.38□□□□□ -2.03
CFT2YLR115W ARO10Q06408 635 aa2.38□□□□□ -2.03
CFT2YLR115W DOP1Q03921 1698 aa2.38□□□□□ -2.03
CFT2YLR115W SSB1P11484 613 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms