RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C YAP5P40574 245 aa6.12□□□□□ -1.43
SSK1YLR006C ERR3P42222 437 aa6.12□□□□□ -1.43
SSK1YLR006C SET2P46995 733 aaKnown RBP6.12□□□□□ -1.43
SSK1YLR006C PMT3P47190 753 aa6.12□□□□□ -1.43
SSK1YLR006C RNR4P49723 345 aaKnown RBP6.12□□□□□ -1.43
SSK1YLR006C YGL138CP53122 345 aa6.12□□□□□ -1.43
SSK1YLR006C PCL10P53124 433 aa6.12□□□□□ -1.43
SSK1YLR006C VPS30Q02948 557 aa6.12□□□□□ -1.43
SSK1YLR006C SFH1Q06168 426 aa6.12□□□□□ -1.43
SSK1YLR006C UTP4Q06679 776 aaKnown RBP6.12□□□□□ -1.43
SSK1YLR006C MET8P15807 274 aa6.11□□□□□ -1.43
SSK1YLR006C THR4P16120 514 aaKnown RBP6.11□□□□□ -1.43
SSK1YLR006C SAN1P22470 610 aa6.11□□□□□ -1.43
SSK1YLR006C ORC2P32833 620 aa6.11□□□□□ -1.43
SSK1YLR006C ERV25P54837 211 aaKnown RBP6.11□□□□□ -1.43
SSK1YLR006C RPT6Q01939 405 aaKnown RBP6.11□□□□□ -1.43
SSK1YLR006C MYO5Q04439 1219 aaKnown RBP6.11□□□□□ -1.43
SSK1YLR006C YPL260WQ08977 551 aa6.11□□□□□ -1.43
SSK1YLR006C LCB1P25045 558 aaKnown RBP6.11□□□□□ -1.43
SSK1YLR006C STT3P39007 718 aaKnown RBP6.11□□□□□ -1.43
SSK1YLR006C SPC72P39723 622 aa6.11□□□□□ -1.43
SSK1YLR006C SUM1P46676 1062 aa6.11□□□□□ -1.43
SSK1YLR006C HLJ1P48353 224 aa6.11□□□□□ -1.43
SSK1YLR006C MNP1P53163 194 aaPredicted RBP6.11□□□□□ -1.43
SSK1YLR006C SYF1Q04048 859 aaPredicted RBP6.11□□□□□ -1.43
SSK1YLR006C TDA9Q04545 1251 aa6.11□□□□□ -1.43
SSK1YLR006C SOV1Q04748 898 aa6.11□□□□□ -1.43
SSK1YLR006C PHO92Q06390 306 aa6.11□□□□□ -1.43
SSK1YLR006C MDM36Q06820 579 aa6.11□□□□□ -1.43
SSK1YLR006C SMC6Q12749 1114 aa6.11□□□□□ -1.43
SSK1YLR006C RAD61Q99359 647 aa6.11□□□□□ -1.43
SSK1YLR006C FUR4P05316 633 aaKnown RBP6.1□□□□□ -1.43
SSK1YLR006C HMG1P12683 1054 aa6.1□□□□□ -1.43
SSK1YLR006C PHO87P25360 923 aa6.1□□□□□ -1.43
SSK1YLR006C RPL8BP29453 256 aaKnown RBP6.1□□□□□ -1.43
SSK1YLR006C MUD2P36084 527 aaKnown RBP6.1□□□□□ -1.43
SSK1YLR006C SIP3P38717 1229 aa6.1□□□□□ -1.43
SSK1YLR006C YFH7P43591 353 aa6.1□□□□□ -1.43
SSK1YLR006C JJJ2P46997 583 aa6.1□□□□□ -1.43
SSK1YLR006C RTA1P53047 317 aa6.1□□□□□ -1.43
SSK1YLR006C DIB1Q06819 143 aaPredicted RBP6.1□□□□□ -1.43
SSK1YLR006C ATG20Q07528 640 aa6.1□□□□□ -1.43
SSK1YLR006C YOR223WQ12015 292 aa6.1□□□□□ -1.43
SSK1YLR006C RRG1Q12167 365 aaPredicted RBP6.1□□□□□ -1.43
SSK1YLR006C CDC8P00572 216 aa6.1□□□□□ -1.43
SSK1YLR006C PPR1P07272 904 aaPredicted RBP6.1□□□□□ -1.43
SSK1YLR006C MSS18P08593 268 aa6.1□□□□□ -1.43
SSK1YLR006C CKI1P20485 582 aa6.1□□□□□ -1.43
SSK1YLR006C SFP1P32432 683 aa6.1□□□□□ -1.43
SSK1YLR006C KRE6P32486 720 aa6.1□□□□□ -1.43
SSK1YLR006C PET309P32522 965 aaPredicted RBP6.1□□□□□ -1.43
SSK1YLR006C XRS2P33301 854 aa6.1□□□□□ -1.43
SSK1YLR006C COY1P34237 679 aa6.1□□□□□ -1.43
SSK1YLR006C PET10P36139 283 aa6.1□□□□□ -1.43
SSK1YLR006C PTC4P38089 393 aa6.1□□□□□ -1.43
SSK1YLR006C ORC6P38826 435 aa6.1□□□□□ -1.43
SSK1YLR006C UTP18P40362 594 aaPredicted RBP6.1□□□□□ -1.43
SSK1YLR006C IML2P47031 731 aa6.1□□□□□ -1.43
SSK1YLR006C YJR098CP47139 656 aa6.1□□□□□ -1.43
SSK1YLR006C NGL3Q03210 505 aa6.1□□□□□ -1.43
SSK1YLR006C YMR114CQ04471 368 aaKnown RBP6.1□□□□□ -1.43
SSK1YLR006C UFO1Q04511 668 aa6.1□□□□□ -1.43
SSK1YLR006C ADY4Q05955 493 aa6.1□□□□□ -1.43
SSK1YLR006C YPL225WQ08971 146 aaKnown RBP6.1□□□□□ -1.43
SSK1YLR006C JIP3O13555 125 aa6.09□□□□□ -1.43
SSK1YLR006C CCP1P00431 361 aa6.09□□□□□ -1.43
SSK1YLR006C TRX1P22217 103 aaKnown RBP6.09□□□□□ -1.43
SSK1YLR006C PHO84P25297 587 aaKnown RBP6.09□□□□□ -1.43
SSK1YLR006C ASF2P32448 525 aaPredicted RBP6.09□□□□□ -1.43
SSK1YLR006C BEM3P32873 1128 aa6.09□□□□□ -1.43
SSK1YLR006C WHI3P34761 661 aaKnown RBP6.09□□□□□ -1.43
SSK1YLR006C CCL1P37366 393 aa6.09□□□□□ -1.43
SSK1YLR006C IRC6P43615 237 aa6.09□□□□□ -1.43
SSK1YLR006C LSB1P53281 241 aa6.09□□□□□ -1.43
SSK1YLR006C DSE4P53753 1117 aa6.09□□□□□ -1.43
SSK1YLR006C OPY2Q06810 360 aa6.09□□□□□ -1.43
SSK1YLR006C SLK19Q08581 821 aaKnown RBP6.09□□□□□ -1.43
SSK1YLR006C NUR1Q12066 484 aa6.09□□□□□ -1.43
SSK1YLR006C PRT1P06103 763 aaKnown RBP6.08□□□□□ -1.44
SSK1YLR006C GFA1P14742 717 aaKnown RBP6.08□□□□□ -1.44
SSK1YLR006C EFB1P32471 206 aaKnown RBP6.08□□□□□ -1.44
SSK1YLR006C MKK2P32491 506 aa6.08□□□□□ -1.44
SSK1YLR006C PEX32P38292 413 aa6.08□□□□□ -1.44
SSK1YLR006C SMC2P38989 1170 aaKnown RBP6.08□□□□□ -1.44
SSK1YLR006C NPR2P39923 615 aa6.08□□□□□ -1.44
SSK1YLR006C LSM5P40089 93 aaKnown RBP6.08□□□□□ -1.44
SSK1YLR006C NUP84P52891 726 aa6.08□□□□□ -1.44
SSK1YLR006C YGR266WP53326 701 aa6.08□□□□□ -1.44
SSK1YLR006C RMP1Q12530 201 aa6.08□□□□□ -1.44
SSK1YLR006C LSO1Q3E827 93 aa6.08□□□□□ -1.44
SSK1YLR006C AI4P03878 556 aa6.08□□□□□ -1.44
SSK1YLR006C CDC34P14682 295 aa6.08□□□□□ -1.44
SSK1YLR006C PUF4P25339 888 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
SSK1YLR006C KRE2P27809 442 aa6.08□□□□□ -1.44
SSK1YLR006C NIC96P34077 839 aa6.08□□□□□ -1.44
SSK1YLR006C EAP1P36041 632 aaKnown RBP6.08□□□□□ -1.44
SSK1YLR006C UGA2P38067 497 aa6.08□□□□□ -1.44
SSK1YLR006C KIC1P38692 1080 aa6.08□□□□□ -1.44
SSK1YLR006C ACA1P39970 489 aa6.08□□□□□ -1.44
SSK1YLR006C YJL070CP40361 888 aa6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms