RNA–Protein interactions for RNA: YKL085W

MDH1, Transcript of Mitochondrial malate dehydrogenase, yeastyeast

Gene MDH1, Length 1,005 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH1YKL085W MET4P32389 672 aa7.08□□□□□ -1.28
MDH1YKL085W CDC3P32457 520 aaKnown RBP7.08□□□□□ -1.28
MDH1YKL085W SWE1P32944 819 aa7.08□□□□□ -1.28
MDH1YKL085W TKL2P33315 681 aa7.08□□□□□ -1.28
MDH1YKL085W TBS1P38114 1094 aa7.08□□□□□ -1.28
MDH1YKL085W YFL034WP43564 1073 aa7.08□□□□□ -1.28
MDH1YKL085W CEG1Q01159 459 aaPredicted RBP7.08□□□□□ -1.28
MDH1YKL085W PRM6Q04705 352 aa7.08□□□□□ -1.28
MDH1YKL085W TCO89Q08921 799 aa7.08□□□□□ -1.28
MDH1YKL085W GPM2Q12008 311 aa7.08□□□□□ -1.28
MDH1YKL085W YPR027CQ12079 277 aa7.08□□□□□ -1.28
MDH1YKL085W NDJ1Q12366 352 aa7.08□□□□□ -1.28
MDH1YKL085W RGP1P16664 663 aa7.07□□□□□ -1.28
MDH1YKL085W SCJ1P25303 377 aa7.07□□□□□ -1.28
MDH1YKL085W DOT6P40059 670 aaKnown RBP7.07□□□□□ -1.28
MDH1YKL085W IMP4P53941 290 aaKnown RBP7.07□□□□□ -1.28
MDH1YKL085W WAR1Q03631 944 aa7.07□□□□□ -1.28
MDH1YKL085W FLC1Q08967 793 aa7.07□□□□□ -1.28
MDH1YKL085W TAF10Q12030 206 aa7.07□□□□□ -1.28
MDH1YKL085W TRA1P38811 3744 aa7.06□□□□□ -1.28
MDH1YKL085W PDC6P26263 563 aaKnown RBP7.06□□□□□ -1.28
MDH1YKL085W GAC1P28006 793 aa7.06□□□□□ -1.28
MDH1YKL085W SHE3P38272 425 aaKnown RBP7.06□□□□□ -1.28
MDH1YKL085W SNF7P39929 240 aaKnown RBP7.06□□□□□ -1.28
MDH1YKL085W YNL108CP53929 270 aa7.06□□□□□ -1.28
MDH1YKL085W DON1Q05610 365 aa7.06□□□□□ -1.28
MDH1YKL085W NAT1P12945 854 aaKnown RBP7.05□□□□□ -1.28
MDH1YKL085W IME1P21190 360 aa7.05□□□□□ -1.28
MDH1YKL085W HIR1P32479 840 aa7.05□□□□□ -1.28
MDH1YKL085W PIN4P34217 668 aaKnown RBP RIP-Chip data7.05□□□□□ -1.28not detected
MDH1YKL085W KDX1P36005 433 aa7.05□□□□□ -1.28
MDH1YKL085W TIF5P38431 405 aaKnown RBP7.05□□□□□ -1.28
MDH1YKL085W NUP60P39705 539 aa7.05□□□□□ -1.28
MDH1YKL085W FTR1P40088 404 aa7.05□□□□□ -1.28
MDH1YKL085W NMA2P53204 395 aa7.05□□□□□ -1.28
MDH1YKL085W GCN5Q03330 439 aa7.05□□□□□ -1.28
MDH1YKL085W GYL1Q04322 720 aa7.05□□□□□ -1.28
MDH1YKL085W PSR2Q07949 397 aa7.05□□□□□ -1.28
MDH1YKL085W GIS3Q12418 502 aa7.05□□□□□ -1.28
MDH1YKL085W REV1P12689 985 aa7.04□□□□□ -1.28
MDH1YKL085W FPR1P20081 114 aaKnown RBP7.04□□□□□ -1.28
MDH1YKL085W RDS1P25611 832 aa7.04□□□□□ -1.28
MDH1YKL085W BMH1P29311 267 aaKnown RBP7.04□□□□□ -1.28
MDH1YKL085W FRE1P32791 686 aa7.04□□□□□ -1.28
MDH1YKL085W FHL1P39521 936 aa7.04□□□□□ -1.28
MDH1YKL085W GIP4P39732 760 aa7.04□□□□□ -1.28
MDH1YKL085W YIL161WP40449 235 aaKnown RBP7.04□□□□□ -1.28
MDH1YKL085W KIN3P22209 435 aa7.03□□□□□ -1.28
MDH1YKL085W STE5P32917 917 aa7.03□□□□□ -1.28
MDH1YKL085W PRX1P34227 261 aaKnown RBP7.03□□□□□ -1.28
MDH1YKL085W TCD2P36101 447 aaKnown RBP7.03□□□□□ -1.28
MDH1YKL085W YBR225WP38321 900 aa7.03□□□□□ -1.28
MDH1YKL085W YPT35P38815 214 aaKnown RBP7.03□□□□□ -1.28
MDH1YKL085W DSE1P40077 573 aa7.03□□□□□ -1.28
MDH1YKL085W YIR007WP40566 764 aa7.03□□□□□ -1.28
MDH1YKL085W TIM8P57744 87 aa7.03□□□□□ -1.28
MDH1YKL085W MUB1Q03162 620 aa7.03□□□□□ -1.28
MDH1YKL085W VPS20Q04272 221 aa7.03□□□□□ -1.28
MDH1YKL085W ECM22Q05958 814 aaPredicted RBP7.03□□□□□ -1.28
MDH1YKL085W YRR1Q12172 810 aa7.03□□□□□ -1.28
MDH1YKL085W RNR1P21524 888 aaKnown RBP7.02□□□□□ -1.29
MDH1YKL085W DSS4P32601 143 aa7.02□□□□□ -1.29
MDH1YKL085W GIP1P38229 639 aa7.02□□□□□ -1.29
MDH1YKL085W SOL3P38858 249 aa7.02□□□□□ -1.29
MDH1YKL085W SAH1P39954 449 aaKnown RBP7.02□□□□□ -1.29
MDH1YKL085W AVT2P39981 480 aa7.02□□□□□ -1.29
MDH1YKL085W ERG10P41338 398 aaKnown RBP7.02□□□□□ -1.29
MDH1YKL085W SMC3P47037 1230 aa7.02□□□□□ -1.29
MDH1YKL085W SEG1Q04279 960 aa7.02□□□□□ -1.29
MDH1YKL085W JIP5Q06214 492 aaPredicted RBP7.02□□□□□ -1.29
MDH1YKL085W MLH2Q07980 695 aa7.02□□□□□ -1.29
MDH1YKL085W MED1Q12321 566 aa7.02□□□□□ -1.29
MDH1YKL085W GAL10P04397 699 aa7.01□□□□□ -1.29
MDH1YKL085W CDC42P19073 191 aa7.01□□□□□ -1.29
MDH1YKL085W RGR1P19263 1082 aa7.01□□□□□ -1.29
MDH1YKL085W RRT12P25381 491 aa7.01□□□□□ -1.29
MDH1YKL085W DAL1P32375 460 aa7.01□□□□□ -1.29
MDH1YKL085W SWI3P32591 825 aa7.01□□□□□ -1.29
MDH1YKL085W GGA2P38817 585 aaKnown RBP7.01□□□□□ -1.29
MDH1YKL085W RAD55P38953 406 aa7.01□□□□□ -1.29
MDH1YKL085W PCF11P39081 626 aaPredicted RBP7.01□□□□□ -1.29
MDH1YKL085W KAP123P40069 1113 aaKnown RBP7.01□□□□□ -1.29
MDH1YKL085W NPA3P47122 385 aa7.01□□□□□ -1.29
MDH1YKL085W TBF1Q02457 562 aa7.01□□□□□ -1.29
MDH1YKL085W TSR1Q07381 788 aaKnown RBP7.01□□□□□ -1.29
MDH1YKL085W RLP24Q07915 199 aaKnown RBP7.01□□□□□ -1.29
MDH1YKL085W ABP140Q08641 628 aaKnown RBP7.01□□□□□ -1.29
MDH1YKL085W YPL216WQ08964 1102 aa7.01□□□□□ -1.29
MDH1YKL085W SLX4Q12098 748 aa7.01□□□□□ -1.29
MDH1YKL085W CHS2P14180 963 aa7□□□□□ -1.29
MDH1YKL085W PUP1P25043 261 aa7□□□□□ -1.29
MDH1YKL085W SAT4P25333 603 aaKnown RBP7□□□□□ -1.29
MDH1YKL085W CDC15P27636 974 aa7□□□□□ -1.29
MDH1YKL085W RRN6P32786 894 aa7□□□□□ -1.29
MDH1YKL085W SHQ1P40486 507 aaPredicted RBP7□□□□□ -1.29
MDH1YKL085W KRE33P53914 1056 aaKnown RBP7□□□□□ -1.29
MDH1YKL085W EAF1Q06337 982 aa7□□□□□ -1.29
MDH1YKL085W YOR387CQ08910 206 aa7□□□□□ -1.29
MDH1YKL085W GCN1P33892 2672 aaKnown RBP6.99□□□□□ -1.29
MDH1YKL085W ATG12P38316 186 aa6.99□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 51 ms