RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W PEX15Q08215 383 aa2.55□□□□□ -2
NUP100YKL068W YOR296WQ08748 1289 aa2.55□□□□□ -2
NUP100YKL068W ENA5Q12691 1091 aa2.55□□□□□ -2
NUP100YKL068W STF1P01098 86 aa2.54□□□□□ -2
NUP100YKL068W SES1P07284 462 aaKnown RBP2.54□□□□□ -2
NUP100YKL068W TRK1P12685 1235 aa2.54□□□□□ -2
NUP100YKL068W GUK1P15454 187 aaKnown RBP2.54□□□□□ -2
NUP100YKL068W RPC53P25441 422 aa2.54□□□□□ -2
NUP100YKL068W CMK1P27466 446 aaKnown RBP2.54□□□□□ -2
NUP100YKL068W KAP122P32767 1081 aa2.54□□□□□ -2
NUP100YKL068W PDR3P33200 976 aa2.54□□□□□ -2
NUP100YKL068W BCK2P33306 851 aa2.54□□□□□ -2
NUP100YKL068W SLC1P33333 303 aa2.54□□□□□ -2
NUP100YKL068W MCD4P36051 919 aa2.54□□□□□ -2
NUP100YKL068W RDH54P38086 958 aa2.54□□□□□ -2
NUP100YKL068W CCZ1P38273 704 aa2.54□□□□□ -2
NUP100YKL068W TDA3P38758 523 aa2.54□□□□□ -2
NUP100YKL068W AXL2P38928 823 aa2.54□□□□□ -2
NUP100YKL068W YIL166CP40445 542 aa2.54□□□□□ -2
NUP100YKL068W OYE3P41816 400 aaPredicted RBP2.54□□□□□ -2
NUP100YKL068W RNR4P49723 345 aaKnown RBP2.54□□□□□ -2
NUP100YKL068W NOG1Q02892 647 aaKnown RBP2.54□□□□□ -2
NUP100YKL068W SKY1Q03656 742 aa2.54□□□□□ -2
NUP100YKL068W DUS3Q06053 668 aaKnown RBP2.54□□□□□ -2
NUP100YKL068W TRX1P22217 103 aaKnown RBP2.54□□□□□ -2
NUP100YKL068W DBF4P32325 704 aa2.54□□□□□ -2
NUP100YKL068W YEL1P34225 687 aa2.54□□□□□ -2
NUP100YKL068W MDJ1P35191 511 aa2.54□□□□□ -2
NUP100YKL068W SHM2P37291 469 aaKnown RBP2.54□□□□□ -2
NUP100YKL068W VRP1P37370 817 aa2.54□□□□□ -2
NUP100YKL068W YRO2P38079 344 aa2.54□□□□□ -2
NUP100YKL068W SIT1P39980 628 aa2.54□□□□□ -2
NUP100YKL068W NOP16P40007 231 aaKnown RBP2.54□□□□□ -2
NUP100YKL068W PSF2P40359 213 aa2.54□□□□□ -2
NUP100YKL068W SMK1P41808 388 aa2.54□□□□□ -2
NUP100YKL068W SET2P46995 733 aaKnown RBP2.54□□□□□ -2
NUP100YKL068W MDE1P47095 244 aa2.54□□□□□ -2
NUP100YKL068W ARC35P53731 342 aaKnown RBP2.54□□□□□ -2
NUP100YKL068W TIM11P81449 96 aaPredicted RBP2.54□□□□□ -2
NUP100YKL068W YHM2Q04013 314 aa2.54□□□□□ -2
NUP100YKL068W UTP21Q06078 939 aaPredicted RBP2.54□□□□□ -2
NUP100YKL068W YLR257WQ06146 321 aaKnown RBP2.54□□□□□ -2
NUP100YKL068W GUP2Q08929 609 aa2.54□□□□□ -2
NUP100YKL068W NUR1Q12066 484 aa2.54□□□□□ -2
NUP100YKL068W SMF3Q12078 473 aaPredicted RBP2.54□□□□□ -2
NUP100YKL068W TY4B-JP47024 1803 aa2.53□□□□□ -2
NUP100YKL068W DID4P36108 232 aa2.53□□□□□ -2
NUP100YKL068W EMP65P40085 556 aa2.53□□□□□ -2
NUP100YKL068W YIL165CP40446 119 aa2.53□□□□□ -2
NUP100YKL068W AXL1P40851 1208 aa2.53□□□□□ -2
NUP100YKL068W CAF16P43569 289 aa2.53□□□□□ -2
NUP100YKL068W IRC6P43615 237 aa2.53□□□□□ -2
NUP100YKL068W ASK10P48361 1146 aa2.53□□□□□ -2
NUP100YKL068W MSB3P48566 633 aaPredicted RBP2.53□□□□□ -2
NUP100YKL068W UBC9P50623 157 aaPredicted RBP2.53□□□□□ -2
NUP100YKL068W YML6P51998 286 aa2.53□□□□□ -2
NUP100YKL068W YGR250CP53316 781 aaKnown RBP2.53□□□□□ -2
NUP100YKL068W YPL071CQ02864 156 aa2.53□□□□□ -2
NUP100YKL068W YMR155WQ03795 547 aa2.53□□□□□ -2
NUP100YKL068W SPO71Q03868 1245 aa2.53□□□□□ -2
NUP100YKL068W GSF2Q04697 403 aaKnown RBP2.53□□□□□ -2
NUP100YKL068W EST2Q06163 884 aa2.53□□□□□ -2
NUP100YKL068W OMS1Q06668 471 aa2.53□□□□□ -2
NUP100YKL068W DCS2Q12123 353 aa2.53□□□□□ -2
NUP100YKL068W RPS21BQ3E754 87 aaKnown RBP2.53□□□□□ -2
NUP100YKL068W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.53□□□□□ -2 RIP-Chip
NUP100YKL068W SNF1P06782 633 aaKnown RBP2.53□□□□□ -2
NUP100YKL068W DBP5P20449 482 aaKnown RBP2.53□□□□□ -2
NUP100YKL068W HOG1P32485 435 aa2.53□□□□□ -2
NUP100YKL068W ESL2P36168 1195 aa2.53□□□□□ -2
NUP100YKL068W HSL7P38274 827 aa2.53□□□□□ -2
NUP100YKL068W KAP123P40069 1113 aaKnown RBP2.53□□□□□ -2
NUP100YKL068W RAD26P40352 1085 aa2.53□□□□□ -2
NUP100YKL068W CCT5P40413 562 aaKnown RBP2.53□□□□□ -2
NUP100YKL068W LYS14P40971 790 aa2.53□□□□□ -2
NUP100YKL068W SEC27P41811 889 aaKnown RBP2.53□□□□□ -2
NUP100YKL068W CIT3P43635 486 aa2.53□□□□□ -2
NUP100YKL068W CPR6P53691 371 aaKnown RBP2.53□□□□□ -2
NUP100YKL068W CNM67P53865 581 aaKnown RBP2.53□□□□□ -2
NUP100YKL068W MFB1Q04922 465 aa2.53□□□□□ -2
NUP100YKL068W CUE5Q08412 411 aaKnown RBP2.53□□□□□ -2
NUP100YKL068W HAL9Q12180 1030 aa2.53□□□□□ -2
NUP100YKL068W KRE5P22023 1365 aa2.52□□□□□ -2.01
NUP100YKL068W RPP2BP02400 110 aaKnown RBP2.52□□□□□ -2.01
NUP100YKL068W RED1P14291 827 aa2.52□□□□□ -2.01
NUP100YKL068W ATP12P22135 325 aa2.52□□□□□ -2.01
NUP100YKL068W PDC6P26263 563 aaKnown RBP2.52□□□□□ -2.01
NUP100YKL068W YBR287WP38355 427 aa2.52□□□□□ -2.01
NUP100YKL068W RRF1P38771 230 aa2.52□□□□□ -2.01
NUP100YKL068W HXT6P39003 570 aaKnown RBP2.52□□□□□ -2.01
NUP100YKL068W HXT7P39004 570 aa2.52□□□□□ -2.01
NUP100YKL068W DUN1P39009 513 aa2.52□□□□□ -2.01
NUP100YKL068W SPC72P39723 622 aa2.52□□□□□ -2.01
NUP100YKL068W TOK1P40310 691 aa2.52□□□□□ -2.01
NUP100YKL068W DJP1P40564 432 aa2.52□□□□□ -2.01
NUP100YKL068W IMA5P40884 581 aa2.52□□□□□ -2.01
NUP100YKL068W GUS1P46655 708 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
NUP100YKL068W BNA2P47125 453 aa2.52□□□□□ -2.01
NUP100YKL068W ZIP2P53061 704 aa2.52□□□□□ -2.01
NUP100YKL068W CBK1P53894 756 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms