RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W AIM46P38885 310 aa3.67□□□□□ -1.82
NSP1YJL041W SEN34P39707 275 aa3.67□□□□□ -1.82
NSP1YJL041W PDS1P40316 373 aaPredicted RBP3.67□□□□□ -1.82
NSP1YJL041W MRPS18P42847 217 aa3.67□□□□□ -1.82
NSP1YJL041W TRS85P46944 698 aa3.67□□□□□ -1.82
NSP1YJL041W PRP31P49704 494 aaPredicted RBP3.67□□□□□ -1.82
NSP1YJL041W IMD4P50094 524 aaKnown RBP3.67□□□□□ -1.82
NSP1YJL041W SPC105P53148 917 aa3.67□□□□□ -1.82
NSP1YJL041W CNM67P53865 581 aaKnown RBP3.67□□□□□ -1.82
NSP1YJL041W YAF9P53930 226 aa3.67□□□□□ -1.82
NSP1YJL041W UBP2Q01476 1272 aa3.67□□□□□ -1.82
NSP1YJL041W RSF2P46974 1380 aa3.67□□□□□ -1.82
NSP1YJL041W CCP1P00431 361 aa3.67□□□□□ -1.82
NSP1YJL041W ADE8P04161 214 aa3.67□□□□□ -1.82
NSP1YJL041W VAS1P07806 1104 aaKnown RBP3.67□□□□□ -1.82
NSP1YJL041W MRPL8P22353 238 aa3.67□□□□□ -1.82
NSP1YJL041W VPS34P22543 875 aa3.67□□□□□ -1.82
NSP1YJL041W MEI4P29467 408 aa3.67□□□□□ -1.82
NSP1YJL041W SEC21P32074 935 aaKnown RBP3.67□□□□□ -1.82
NSP1YJL041W UBC6P33296 250 aaPredicted RBP3.67□□□□□ -1.82
NSP1YJL041W PTH2P34222 208 aa3.67□□□□□ -1.82
NSP1YJL041W MIA40P36046 403 aa3.67□□□□□ -1.82
NSP1YJL041W MNN2P38069 597 aa3.67□□□□□ -1.82
NSP1YJL041W RFC5P38251 354 aa3.67□□□□□ -1.82
NSP1YJL041W YHL008CP38750 627 aa3.67□□□□□ -1.82
NSP1YJL041W CCT5P40413 562 aaKnown RBP3.67□□□□□ -1.82
NSP1YJL041W SER33P40510 469 aa3.67□□□□□ -1.82
NSP1YJL041W SBE2P42223 864 aaKnown RBP3.67□□□□□ -1.82
NSP1YJL041W SKP1P52286 194 aa3.67□□□□□ -1.82
NSP1YJL041W CGR1P53188 120 aa3.67□□□□□ -1.82
NSP1YJL041W RET3P53600 189 aa3.67□□□□□ -1.82
NSP1YJL041W MRPL50P53724 139 aa3.67□□□□□ -1.82
NSP1YJL041W YNL165WP53891 406 aa3.67□□□□□ -1.82
NSP1YJL041W YNL040WP53960 456 aaPredicted RBP3.67□□□□□ -1.82
NSP1YJL041W TIM50Q02776 476 aa3.67□□□□□ -1.82
NSP1YJL041W AOS1Q06624 347 aa3.67□□□□□ -1.82
NSP1YJL041W ATG13Q06628 738 aa3.67□□□□□ -1.82
NSP1YJL041W MCM21Q06675 368 aa3.67□□□□□ -1.82
NSP1YJL041W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
NSP1YJL041W TAF10Q12030 206 aa3.67□□□□□ -1.82
NSP1YJL041W INH1P01097 85 aa3.66□□□□□ -1.82
NSP1YJL041W PAB1P04147 577 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
NSP1YJL041W RPS31P05759 152 aaKnown RBP3.66□□□□□ -1.82
NSP1YJL041W HIS3P06633 220 aa3.66□□□□□ -1.82
NSP1YJL041W PEX1P24004 1043 aa3.66□□□□□ -1.82
NSP1YJL041W ECM32P32644 1121 aaKnown RBP3.66□□□□□ -1.82
NSP1YJL041W SMY2P32909 740 aaKnown RBP3.66□□□□□ -1.82
NSP1YJL041W KTR2P33550 425 aa3.66□□□□□ -1.82
NSP1YJL041W MAL31P38156 614 aa3.66□□□□□ -1.82
NSP1YJL041W RGD1P38339 666 aa3.66□□□□□ -1.82
NSP1YJL041W RRP8P38961 392 aaKnown RBP3.66□□□□□ -1.82
NSP1YJL041W CCT6P39079 546 aa3.66□□□□□ -1.82
NSP1YJL041W FYV10P40492 516 aa3.66□□□□□ -1.82
NSP1YJL041W SNZ3P43545 298 aa3.66□□□□□ -1.82
NSP1YJL041W RGD2P43556 714 aa3.66□□□□□ -1.82
NSP1YJL041W APS3P47064 194 aa3.66□□□□□ -1.82
NSP1YJL041W ATP22P50273 684 aaPredicted RBP3.66□□□□□ -1.82
NSP1YJL041W SNZ2P53824 298 aa3.66□□□□□ -1.82
NSP1YJL041W TIM11P81449 96 aaPredicted RBP3.66□□□□□ -1.82
NSP1YJL041W RRN5Q02983 363 aa3.66□□□□□ -1.82
NSP1YJL041W VPS20Q04272 221 aa3.66□□□□□ -1.82
NSP1YJL041W MAG2Q06436 670 aaKnown RBP3.66□□□□□ -1.82
NSP1YJL041W ARV1Q06541 321 aa3.66□□□□□ -1.82
NSP1YJL041W PUS7Q08647 676 aaKnown RBP3.66□□□□□ -1.82
NSP1YJL041W PIN2Q12057 282 aa3.66□□□□□ -1.82
NSP1YJL041W OCA6Q12454 224 aa3.66□□□□□ -1.82
NSP1YJL041W GCN3P14741 305 aa3.66□□□□□ -1.82
NSP1YJL041W PRE9P23638 258 aaKnown RBP3.66□□□□□ -1.82
NSP1YJL041W PDC6P26263 563 aaKnown RBP3.66□□□□□ -1.82
NSP1YJL041W RPC19P28000 142 aaKnown RBP3.66□□□□□ -1.82
NSP1YJL041W BMH1P29311 267 aaKnown RBP3.66□□□□□ -1.82
NSP1YJL041W ANP1P32629 500 aa3.66□□□□□ -1.82
NSP1YJL041W LOS1P33418 1100 aaPredicted RBP3.66□□□□□ -1.82
NSP1YJL041W RCN1P36054 211 aa3.66□□□□□ -1.82
NSP1YJL041W OSH7P38755 437 aa3.66□□□□□ -1.82
NSP1YJL041W PMC1P38929 1173 aaPredicted RBP3.66□□□□□ -1.82
NSP1YJL041W EMP65P40085 556 aa3.66□□□□□ -1.82
NSP1YJL041W MNT3P40549 630 aa3.66□□□□□ -1.82
NSP1YJL041W CIN5P40917 295 aa3.66□□□□□ -1.82
NSP1YJL041W HUL4P40985 892 aa3.66□□□□□ -1.82
NSP1YJL041W ATG36P46983 293 aa3.66□□□□□ -1.82
NSP1YJL041W YGR266WP53326 701 aa3.66□□□□□ -1.82
NSP1YJL041W SFB2P53953 876 aa3.66□□□□□ -1.82
NSP1YJL041W REX2P54964 269 aaKnown RBP3.66□□□□□ -1.82
NSP1YJL041W NSE5Q03718 556 aa3.66□□□□□ -1.82
NSP1YJL041W MGR3Q04472 501 aa3.66□□□□□ -1.82
NSP1YJL041W YLR287CQ05881 355 aa3.66□□□□□ -1.82
NSP1YJL041W SEC10Q06245 871 aa3.66□□□□□ -1.82
NSP1YJL041W SMC5Q08204 1093 aa3.66□□□□□ -1.82
NSP1YJL041W YIG1Q08956 461 aa3.66□□□□□ -1.82
NSP1YJL041W NUR1Q12066 484 aa3.66□□□□□ -1.82
NSP1YJL041W TIF6Q12522 245 aaKnown RBP3.66□□□□□ -1.82
NSP1YJL041W CHC1P22137 1653 aaKnown RBP3.65□□□□□ -1.82
NSP1YJL041W STF1P01098 86 aa3.65□□□□□ -1.82
NSP1YJL041W FLP1P03870 423 aa3.65□□□□□ -1.82
NSP1YJL041W RAP1P11938 827 aa3.65□□□□□ -1.82
NSP1YJL041W MRPL25P23369 157 aa3.65□□□□□ -1.82
NSP1YJL041W RDS1P25611 832 aa3.65□□□□□ -1.82
NSP1YJL041W RIB7P33312 244 aa3.65□□□□□ -1.82
NSP1YJL041W YKL100CP34248 587 aa3.65□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms