RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeast

Gene CTK2, Length 972 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTK2	YJL006C	KCC4	P25389	1037 aa		5.04	□□□□□ -1.6
CTK2	YJL006C	NPY1	P53164	384 aa		5.04	□□□□□ -1.6
CTK2	YJL006C	REC102	Q02721	264 aa		5.04	□□□□□ -1.6
CTK2	YJL006C	PEX1	P24004	1043 aa		5.03	□□□□□ -1.6
CTK2	YJL006C	PTP1	P25044	335 aa		5.03	□□□□□ -1.6
CTK2	YJL006C	MTC2	P34246	357 aa		5.03	□□□□□ -1.6
CTK2	YJL006C	MCD4	P36051	919 aa		5.03	□□□□□ -1.6
CTK2	YJL006C	OCA5	P38738	679 aa		5.03	□□□□□ -1.6
CTK2	YJL006C	BNA3	P47039	444 aa	Known RBP	5.03	□□□□□ -1.6
CTK2	YJL006C	RPN10	P38886	268 aa	Known RBP	5.02	□□□□□ -1.61
CTK2	YJL006C	YGR151C	P53287	111 aa		5.02	□□□□□ -1.61
CTK2	YJL006C	SPC98	P53540	846 aa		5.02	□□□□□ -1.61
CTK2	YJL006C	HMO1	Q03973	246 aa	Known RBP	5.02	□□□□□ -1.61
CTK2	YJL006C	STE12	P13574	688 aa		5.01	□□□□□ -1.61
CTK2	YJL006C	GDH3	P39708	457 aa		5.01	□□□□□ -1.61
CTK2	YJL006C	FMP30	Q02883	468 aa		5.01	□□□□□ -1.61
CTK2	YJL006C	NOP9	P47077	666 aa	Known RBP	5	□□□□□ -1.61
CTK2	YJL006C	COX18	P53239	316 aa		5	□□□□□ -1.61
CTK2	YJL006C	YOL098C	Q12496	1037 aa		5	□□□□□ -1.61
CTK2	YJL006C	PGK1	P00560	416 aa	Known RBP	4.99	□□□□□ -1.61
CTK2	YJL006C	NUP1	P20676	1076 aa		4.99	□□□□□ -1.61
CTK2	YJL006C	STO1	P34160	861 aa	Known RBP	4.99	□□□□□ -1.61
CTK2	YJL006C	YMC2	P38087	329 aa		4.99	□□□□□ -1.61
CTK2	YJL006C	LTP1	P40347	161 aa		4.99	□□□□□ -1.61
CTK2	YJL006C	XBP1	P40489	647 aa		4.99	□□□□□ -1.61
CTK2	YJL006C	NET1	P47035	1189 aa		4.99	□□□□□ -1.61
CTK2	YJL006C	DIA2	Q08496	732 aa	Predicted RBP	4.99	□□□□□ -1.61
CTK2	YJL006C	ABF1	P14164	731 aa		4.98	□□□□□ -1.61
CTK2	YJL006C	SAT4	P25333	603 aa	Known RBP	4.98	□□□□□ -1.61
CTK2	YJL006C	BCS1	P32839	456 aa		4.98	□□□□□ -1.61
CTK2	YJL006C	YKR051W	P36142	418 aa		4.98	□□□□□ -1.61
CTK2	YJL006C	KSP1	P38691	1029 aa	Known RBP	4.98	□□□□□ -1.61
CTK2	YJL006C	GID8	P40208	455 aa		4.98	□□□□□ -1.61
CTK2	YJL006C	NSE3	Q05541	303 aa		4.98	□□□□□ -1.61
CTK2	YJL006C	ECM3	Q99252	613 aa		4.98	□□□□□ -1.61
CTK2	YJL006C	ADE5,7	P07244	802 aa	Known RBP	4.97	□□□□□ -1.61
CTK2	YJL006C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
CTK2	YJL006C	PIG2	P40187	538 aa		4.97	□□□□□ -1.61
CTK2	YJL006C	RPN7	Q06103	429 aa	Known RBP	4.97	□□□□□ -1.61
CTK2	YJL006C	PRP28	P23394	588 aa		4.96	□□□□□ -1.62
CTK2	YJL006C	SRP40	P32583	406 aa	Predicted RBP	4.96	□□□□□ -1.62
CTK2	YJL006C	BIT2	P38346	545 aa		4.96	□□□□□ -1.62
CTK2	YJL006C	YHR097C	P38809	366 aa	Known RBP	4.96	□□□□□ -1.62
CTK2	YJL006C	PMC1	P38929	1173 aa	Predicted RBP	4.96	□□□□□ -1.62
CTK2	YJL006C	MIT1	P40002	666 aa		4.96	□□□□□ -1.62
CTK2	YJL006C	YNL195C	P40168	261 aa		4.96	□□□□□ -1.62
CTK2	YJL006C	CAF16	P43569	289 aa		4.96	□□□□□ -1.62
CTK2	YJL006C	SCS3	P53012	380 aa		4.96	□□□□□ -1.62
CTK2	YJL006C	SNP1	Q00916	300 aa	Predicted RBP	4.96	□□□□□ -1.62
CTK2	YJL006C	THI22	Q06490	572 aa		4.96	□□□□□ -1.62
CTK2	YJL006C	YDL086W	Q07505	273 aa		4.96	□□□□□ -1.62
CTK2	YJL006C	RGT2	Q12300	763 aa		4.96	□□□□□ -1.62
CTK2	YJL006C	PHO5	P00635	467 aa		4.95	□□□□□ -1.62
CTK2	YJL006C	YMC1	P32331	307 aa		4.95	□□□□□ -1.62
CTK2	YJL006C	UGP1	P32861	499 aa	Known RBP	4.95	□□□□□ -1.62
CTK2	YJL006C	RSC8	P43609	557 aa	Known RBP	4.95	□□□□□ -1.62
CTK2	YJL006C	MAL11	P53048	616 aa		4.95	□□□□□ -1.62
CTK2	YJL006C	PCL10	P53124	433 aa		4.95	□□□□□ -1.62
CTK2	YJL006C	CDC53	Q12018	815 aa	Known RBP	4.95	□□□□□ -1.62
CTK2	YJL006C	CDC9	P04819	755 aa		4.94	□□□□□ -1.62
CTK2	YJL006C	RAD18	P10862	487 aa		4.94	□□□□□ -1.62
CTK2	YJL006C	YKR018C	P36114	725 aa		4.94	□□□□□ -1.62
CTK2	YJL006C	HSL7	P38274	827 aa		4.94	□□□□□ -1.62
CTK2	YJL006C	ASN1	P49089	572 aa	Known RBP	4.94	□□□□□ -1.62
CTK2	YJL006C	NMA2	P53204	395 aa		4.94	□□□□□ -1.62
CTK2	YJL006C	LEE1	Q02799	301 aa	Known RBP	4.94	□□□□□ -1.62
CTK2	YJL006C	BMS1	Q08965	1183 aa	Known RBP	4.94	□□□□□ -1.62
CTK2	YJL006C	CHS5	Q12114	671 aa	Known RBP	4.94	□□□□□ -1.62
CTK2	YJL006C	MIH1	P23748	554 aa		4.93	□□□□□ -1.62
CTK2	YJL006C	NHX1	Q04121	633 aa		4.93	□□□□□ -1.62
CTK2	YJL006C	LAM4	P38800	1345 aa		4.93	□□□□□ -1.62
CTK2	YJL006C	YTA7	P40340	1379 aa		4.92	□□□□□ -1.62
CTK2	YJL006C	ERR1	P0CX10	437 aa		4.92	□□□□□ -1.62
CTK2	YJL006C	ERR2	P0CX11	437 aa		4.92	□□□□□ -1.62
CTK2	YJL006C	APN1	P22936	367 aa		4.92	□□□□□ -1.62
CTK2	YJL006C	SEC6	P32844	805 aa		4.92	□□□□□ -1.62
CTK2	YJL006C	TAX4	P47030	604 aa		4.92	□□□□□ -1.62
CTK2	YJL006C	MPS3	P47069	682 aa		4.92	□□□□□ -1.62
CTK2	YJL006C	ARP4	P80428	489 aa		4.92	□□□□□ -1.62
CTK2	YJL006C	YOR131C	Q12486	218 aa		4.92	□□□□□ -1.62
CTK2	YJL006C	FEN2	P25621	512 aa	Known RBP	4.91	□□□□□ -1.62
CTK2	YJL006C	YKL091C	P33324	310 aa	Known RBP	4.91	□□□□□ -1.62
CTK2	YJL006C	CHZ1	P40019	153 aa	Predicted RBP	4.91	□□□□□ -1.62
CTK2	YJL006C	MPS1	P54199	764 aa		4.91	□□□□□ -1.62
CTK2	YJL006C	RPN4	Q03465	531 aa		4.91	□□□□□ -1.62
CTK2	YJL006C	HFD1	Q04458	532 aa		4.91	□□□□□ -1.62
CTK2	YJL006C	ULA1	Q12059	462 aa		4.91	□□□□□ -1.62
CTK2	YJL006C	MDM20	Q12387	796 aa	Known RBP	4.91	□□□□□ -1.62
CTK2	YJL006C	MDM12	Q92328	271 aa		4.91	□□□□□ -1.62
CTK2	YJL006C	APL3	P38065	1025 aa		4.9	□□□□□ -1.63
CTK2	YJL006C	CTP1	P38152	299 aa		4.9	□□□□□ -1.63
CTK2	YJL006C	APN2	P38207	520 aa		4.9	□□□□□ -1.63
CTK2	YJL006C	SET2	P46995	733 aa	Known RBP	4.9	□□□□□ -1.63
CTK2	YJL006C	KHA1	P40309	873 aa		4.89	□□□□□ -1.63
CTK2	YJL006C	BUD6	P41697	788 aa		4.89	□□□□□ -1.63
CTK2	YJL006C	RFX1	P48743	811 aa		4.89	□□□□□ -1.63
CTK2	YJL006C	ORC1	P54784	914 aa	Predicted RBP	4.89	□□□□□ -1.63
CTK2	YJL006C	YSH1	Q06224	779 aa	Predicted RBP	4.89	□□□□□ -1.63
CTK2	YJL006C	CIT2	P08679	460 aa		4.88	□□□□□ -1.63
CTK2	YJL006C	GSY1	P23337	708 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms