RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C RPA49Q01080 415 aaPredicted RBP9.1□□□□□ -0.95
SSL2YIL143C DON1Q05610 365 aa9.1□□□□□ -0.95
SSL2YIL143C ENO2P00925 437 aaKnown RBP9.09□□□□□ -0.95
SSL2YIL143C RAD10P06838 210 aa9.09□□□□□ -0.95
SSL2YIL143C DBP5P20449 482 aaKnown RBP9.09□□□□□ -0.95
SSL2YIL143C KIP2P28743 706 aa9.09□□□□□ -0.95
SSL2YIL143C AFG2P32794 780 aa9.09□□□□□ -0.95
SSL2YIL143C GYP6P32806 458 aa9.09□□□□□ -0.95
SSL2YIL143C UGA4P32837 571 aa9.09□□□□□ -0.95
SSL2YIL143C MRX3P38172 270 aa9.09□□□□□ -0.95
SSL2YIL143C TAF1P46677 1066 aa9.09□□□□□ -0.95
SSL2YIL143C PTA1Q01329 785 aaPredicted RBP9.09□□□□□ -0.95
SSL2YIL143C YLR053CQ12026 108 aa9.09□□□□□ -0.95
SSL2YIL143C PMS1P14242 873 aa9.09□□□□□ -0.95
SSL2YIL143C SFL1P20134 766 aa9.09□□□□□ -0.95
SSL2YIL143C CDC27P38042 758 aa9.09□□□□□ -0.95
SSL2YIL143C VHR2P40041 505 aa9.09□□□□□ -0.95
SSL2YIL143C FAF1P40546 346 aaPredicted RBP9.09□□□□□ -0.95
SSL2YIL143C CNM67P53865 581 aaKnown RBP9.09□□□□□ -0.95
SSL2YIL143C OSH6Q02201 448 aa9.09□□□□□ -0.95
SSL2YIL143C CUR1Q06469 252 aa9.09□□□□□ -0.95
SSL2YIL143C NCR1Q12200 1170 aa9.09□□□□□ -0.95
SSL2YIL143C TUB2P02557 457 aaKnown RBP9.08□□□□□ -0.96
SSL2YIL143C LAM1P38851 1228 aa9.08□□□□□ -0.96
SSL2YIL143C INP52P50942 1183 aa9.08□□□□□ -0.96
SSL2YIL143C YGL039WP53183 348 aaKnown RBP9.08□□□□□ -0.96
SSL2YIL143C MEH1Q02205 184 aa9.08□□□□□ -0.96
SSL2YIL143C PMA1P05030 918 aaKnown RBP9.08□□□□□ -0.96
SSL2YIL143C KAR4P25583 335 aa9.08□□□□□ -0.96
SSL2YIL143C SMF2P38778 549 aa9.08□□□□□ -0.96
SSL2YIL143C LIA1P47120 325 aaKnown RBP9.08□□□□□ -0.96
SSL2YIL143C TAM41P53230 385 aa9.08□□□□□ -0.96
SSL2YIL143C TBF1Q02457 562 aa9.08□□□□□ -0.96
SSL2YIL143C ACL4Q03771 387 aa9.08□□□□□ -0.96
SSL2YIL143C RSA3Q05942 220 aaKnown RBP9.08□□□□□ -0.96
SSL2YIL143C RGA2Q06407 1009 aa9.08□□□□□ -0.96
SSL2YIL143C SLP1Q12232 587 aa9.08□□□□□ -0.96
SSL2YIL143C RUP1Q12242 671 aa9.08□□□□□ -0.96
SSL2YIL143C SSC1P0CS90 654 aaKnown RBP9.07□□□□□ -0.96
SSL2YIL143C KEX2P13134 814 aa9.07□□□□□ -0.96
SSL2YIL143C MRM1P25270 412 aa9.07□□□□□ -0.96
SSL2YIL143C NPP1P25353 742 aa9.07□□□□□ -0.96
SSL2YIL143C COY1P34237 679 aa9.07□□□□□ -0.96
SSL2YIL143C JEM1P40358 645 aa9.07□□□□□ -0.96
SSL2YIL143C FIS1P40515 155 aa9.07□□□□□ -0.96
SSL2YIL143C DRN1P53255 507 aaKnown RBP9.07□□□□□ -0.96
SSL2YIL143C KTR5P53966 522 aaPredicted RBP9.07□□□□□ -0.96
SSL2YIL143C SNA3P14359 133 aa9.07□□□□□ -0.96
SSL2YIL143C SSD1P24276 1250 aaKnown RBP RIP-Chip data9.07□□□□□ -0.96not detected
SSL2YIL143C HEM3P28789 327 aa9.07□□□□□ -0.96
SSL2YIL143C PIN4P34217 668 aaKnown RBP RIP-Chip data9.07□□□□□ -0.96not detected
SSL2YIL143C ECM4P36156 370 aa9.07□□□□□ -0.96
SSL2YIL143C SCS2P40075 244 aaKnown RBP9.07□□□□□ -0.96
SSL2YIL143C RGD2P43556 714 aa9.07□□□□□ -0.96
SSL2YIL143C YJL171CP46992 396 aa9.07□□□□□ -0.96
SSL2YIL143C CPR7P47103 393 aa9.07□□□□□ -0.96
SSL2YIL143C MEU1Q07938 337 aaKnown RBP RIP-Chip data9.07□□□□□ -0.96not detected
SSL2YIL143C MCM5P29496 775 aaKnown RBP9.06□□□□□ -0.96
SSL2YIL143C SEG2P34250 1132 aa9.06□□□□□ -0.96
SSL2YIL143C CSG2P35206 410 aa9.06□□□□□ -0.96
SSL2YIL143C YHL008CP38750 627 aa9.06□□□□□ -0.96
SSL2YIL143C NMD3P38861 518 aaKnown RBP9.06□□□□□ -0.96
SSL2YIL143C CTR1P49573 406 aa9.06□□□□□ -0.96
SSL2YIL143C NOP15P53927 220 aaPredicted RBP9.06□□□□□ -0.96
SSL2YIL143C PGK1P00560 416 aaKnown RBP9.06□□□□□ -0.96
SSL2YIL143C MCM1P11746 286 aa9.06□□□□□ -0.96
SSL2YIL143C SSA4P22202 642 aaKnown RBP9.06□□□□□ -0.96
SSL2YIL143C BEM4P39011 633 aa9.06□□□□□ -0.96
SSL2YIL143C BIO4P53630 237 aa9.06□□□□□ -0.96
SSL2YIL143C ARO80Q04052 950 aa9.06□□□□□ -0.96
SSL2YIL143C IVY1Q04934 453 aa9.06□□□□□ -0.96
SSL2YIL143C CRD1Q07560 283 aa9.06□□□□□ -0.96
SSL2YIL143C YOR059CQ08448 450 aaKnown RBP9.06□□□□□ -0.96
SSL2YIL143C CDC24P11433 854 aaPredicted RBP9.05□□□□□ -0.96
SSL2YIL143C RNR1P21524 888 aaKnown RBP9.05□□□□□ -0.96
SSL2YIL143C SNT1P25357 1226 aa9.05□□□□□ -0.96
SSL2YIL143C ICL1P28240 557 aaPredicted RBP9.05□□□□□ -0.96
SSL2YIL143C SET3P36124 751 aa9.05□□□□□ -0.96
SSL2YIL143C CBR1P38626 284 aaKnown RBP9.05□□□□□ -0.96
SSL2YIL143C PHO86P46956 311 aa9.05□□□□□ -0.96
SSL2YIL143C AVT1P47082 602 aa9.05□□□□□ -0.96
SSL2YIL143C HSH155P49955 971 aaKnown RBP9.05□□□□□ -0.96
SSL2YIL143C RPM2Q02773 1202 aa9.05□□□□□ -0.96
SSL2YIL143C TRE1Q08919 783 aa9.05□□□□□ -0.96
SSL2YIL143C TUB3P09734 445 aaKnown RBP9.05□□□□□ -0.96
SSL2YIL143C TCP1P12612 559 aaKnown RBP9.05□□□□□ -0.96
SSL2YIL143C HES1P35843 434 aa9.05□□□□□ -0.96
SSL2YIL143C PCA1P38360 1216 aa9.05□□□□□ -0.96
SSL2YIL143C PPX1P38698 397 aa9.05□□□□□ -0.96
SSL2YIL143C TMN3P40071 706 aa9.05□□□□□ -0.96
SSL2YIL143C ALY2P47029 1046 aa9.05□□□□□ -0.96
SSL2YIL143C FMN1Q03778 218 aa9.05□□□□□ -0.96
SSL2YIL143C CDC73Q06697 393 aa9.05□□□□□ -0.96
SSL2YIL143C YDR018CQ12185 396 aa9.05□□□□□ -0.96
SSL2YIL143C YAK1P14680 807 aa9.04□□□□□ -0.96
SSL2YIL143C BUD31P25337 157 aaPredicted RBP9.04□□□□□ -0.96
SSL2YIL143C YSC84P32793 468 aa9.04□□□□□ -0.96
SSL2YIL143C ATG19P35193 415 aa9.04□□□□□ -0.96
SSL2YIL143C APM2P38700 605 aa9.04□□□□□ -0.96
SSL2YIL143C TRM5P38793 499 aa9.04□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms