RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W MRS2Q01926 470 aa11.85□□□□□ -0.51
SIM1YIL123W DOT1Q04089 582 aaKnown RBP11.85□□□□□ -0.51
SIM1YIL123W SXM1Q04175 944 aaKnown RBP11.85□□□□□ -0.51
SIM1YIL123W TUB3P09734 445 aaKnown RBP11.84□□□□□ -0.51
SIM1YIL123W ADE2P21264 571 aaKnown RBP11.84□□□□□ -0.51
SIM1YIL123W PLC1P32383 869 aa11.84□□□□□ -0.51
SIM1YIL123W SEG2P34250 1132 aa11.84□□□□□ -0.51
SIM1YIL123W MSG5P38590 489 aa11.84□□□□□ -0.51
SIM1YIL123W TMN3P40071 706 aa11.84□□□□□ -0.51
SIM1YIL123W SAP185P40856 1058 aa11.84□□□□□ -0.51
SIM1YIL123W GPD1Q00055 391 aaKnown RBP11.84□□□□□ -0.51
SIM1YIL123W IVY1Q04934 453 aa11.84□□□□□ -0.51
SIM1YIL123W MRP4P32902 394 aa11.83□□□□□ -0.52
SIM1YIL123W CBR1P38626 284 aaKnown RBP11.83□□□□□ -0.52
SIM1YIL123W SNZ3P43545 298 aa11.83□□□□□ -0.52
SIM1YIL123W PRY3P47033 881 aa11.83□□□□□ -0.52
SIM1YIL123W INP52P50942 1183 aa11.83□□□□□ -0.52
SIM1YIL123W ALT1P52893 592 aa11.83□□□□□ -0.52
SIM1YIL123W YGL036WP53185 909 aaPredicted RBP11.83□□□□□ -0.52
SIM1YIL123W SNZ2P53824 298 aa11.83□□□□□ -0.52
SIM1YIL123W YLR455WQ06188 304 aa11.83□□□□□ -0.52
SIM1YIL123W RTP1Q12751 981 aa11.83□□□□□ -0.52
SIM1YIL123W ADH4P10127 382 aa11.82□□□□□ -0.52
SIM1YIL123W PYC1P11154 1178 aaKnown RBP11.82□□□□□ -0.52
SIM1YIL123W PUF4P25339 888 aaKnown RBP RIP-Chip data11.82□□□□□ -0.52not detected
SIM1YIL123W YME1P32795 747 aa11.82□□□□□ -0.52
SIM1YIL123W YAP1801P38856 637 aa11.82□□□□□ -0.52
SIM1YIL123W YMR134WP40207 237 aa11.82□□□□□ -0.52
SIM1YIL123W INA22P40576 216 aa11.82□□□□□ -0.52
SIM1YIL123W YJR107WP47145 328 aa11.82□□□□□ -0.52
SIM1YIL123W BRE5P53741 515 aaKnown RBP11.82□□□□□ -0.52
SIM1YIL123W NOG2P53742 486 aaKnown RBP11.82□□□□□ -0.52
SIM1YIL123W YPR027CQ12079 277 aa11.82□□□□□ -0.52
SIM1YIL123W ARG4P04076 463 aaPredicted RBP11.81□□□□□ -0.52
SIM1YIL123W EFB1P32471 206 aaKnown RBP11.81□□□□□ -0.52
SIM1YIL123W NOP4P37838 685 aaKnown RBP11.81□□□□□ -0.52
SIM1YIL123W PBP2P38151 413 aaKnown RBP RIP-Chip data11.81□□□□□ -0.52not detected
SIM1YIL123W VHC1P38329 1120 aa11.81□□□□□ -0.52
SIM1YIL123W PCA1P38360 1216 aa11.81□□□□□ -0.52
SIM1YIL123W PCM1P38628 557 aaKnown RBP11.81□□□□□ -0.52
SIM1YIL123W APM2P38700 605 aa11.81□□□□□ -0.52
SIM1YIL123W QNS1P38795 714 aaKnown RBP11.81□□□□□ -0.52
SIM1YIL123W YER186CP40101 306 aa11.81□□□□□ -0.52
SIM1YIL123W MND1P53102 219 aa11.81□□□□□ -0.52
SIM1YIL123W ALG11P53954 548 aaKnown RBP11.81□□□□□ -0.52
SIM1YIL123W CWC21Q03375 135 aaKnown RBP11.81□□□□□ -0.52
SIM1YIL123W YOR059CQ08448 450 aaKnown RBP11.81□□□□□ -0.52
SIM1YIL123W SRF1Q12516 437 aa11.81□□□□□ -0.52
SIM1YIL123W SEY1Q99287 776 aa11.81□□□□□ -0.52
SIM1YIL123W CHS1P08004 1131 aa11.8□□□□□ -0.52
SIM1YIL123W YML002WP0CF17 737 aa11.8□□□□□ -0.52
SIM1YIL123W SPO16P17122 198 aa11.8□□□□□ -0.52
SIM1YIL123W CCT2P39076 527 aaKnown RBP11.8□□□□□ -0.52
SIM1YIL123W SMX2P40204 77 aaKnown RBP11.8□□□□□ -0.52
SIM1YIL123W LAM5P43560 674 aa11.8□□□□□ -0.52
SIM1YIL123W YML6P51998 286 aa11.8□□□□□ -0.52
SIM1YIL123W MUK1Q02866 612 aa11.8□□□□□ -0.52
SIM1YIL123W FRA1Q07825 749 aa11.8□□□□□ -0.52
SIM1YIL123W SUT2Q12286 268 aa11.8□□□□□ -0.52
SIM1YIL123W QCR6P00127 147 aa11.79□□□□□ -0.52
SIM1YIL123W ADE4P04046 510 aaKnown RBP11.79□□□□□ -0.52
SIM1YIL123W KAR3P17119 729 aa11.79□□□□□ -0.52
SIM1YIL123W AEP2P22136 580 aa11.79□□□□□ -0.52
SIM1YIL123W TRX1P22217 103 aaKnown RBP11.79□□□□□ -0.52
SIM1YIL123W BUD2P33314 1104 aa11.79□□□□□ -0.52
SIM1YIL123W DUR3P33413 735 aa11.79□□□□□ -0.52
SIM1YIL123W RPC37P36121 282 aa11.79□□□□□ -0.52
SIM1YIL123W YJR054WP47114 497 aa11.79□□□□□ -0.52
SIM1YIL123W CDD1Q06549 142 aa11.79□□□□□ -0.52
SIM1YIL123W ACM1Q08981 209 aa11.79□□□□□ -0.52
SIM1YIL123W PUS1Q12211 544 aaKnown RBP11.79□□□□□ -0.52
SIM1YIL123W PCD1Q12524 340 aa11.79□□□□□ -0.52
SIM1YIL123W CTF3Q12748 733 aa11.79□□□□□ -0.52
SIM1YIL123W JIP3O13555 125 aa11.78□□□□□ -0.52
SIM1YIL123W RAD10P06838 210 aa11.78□□□□□ -0.52
SIM1YIL123W PUT4P15380 627 aa11.78□□□□□ -0.52
SIM1YIL123W VBA3P25594 458 aa11.78□□□□□ -0.52
SIM1YIL123W VBA5P36172 582 aa11.78□□□□□ -0.52
SIM1YIL123W YGR130CP53278 816 aa11.78□□□□□ -0.52
SIM1YIL123W CPR6P53691 371 aaKnown RBP11.78□□□□□ -0.52
SIM1YIL123W SNU56Q03782 492 aaKnown RBP11.78□□□□□ -0.52
SIM1YIL123W PNP1Q05788 311 aa11.78□□□□□ -0.52
SIM1YIL123W KAP95Q06142 861 aaKnown RBP11.78□□□□□ -0.52
SIM1YIL123W YDR018CQ12185 396 aa11.78□□□□□ -0.52
SIM1YIL123W GCR1P07261 785 aa11.77□□□□□ -0.52
SIM1YIL123W ILV6P25605 309 aaKnown RBP11.77□□□□□ -0.52
SIM1YIL123W DEP1P31385 405 aa11.77□□□□□ -0.52
SIM1YIL123W YBL036CP38197 257 aa11.77□□□□□ -0.52
SIM1YIL123W SWC5P38326 303 aa11.77□□□□□ -0.52
SIM1YIL123W POP4P38336 279 aa11.77□□□□□ -0.52
SIM1YIL123W GEM1P39722 662 aa11.77□□□□□ -0.52
SIM1YIL123W ALD5P40047 520 aaKnown RBP11.77□□□□□ -0.52
SIM1YIL123W PSF2P40359 213 aa11.77□□□□□ -0.52
SIM1YIL123W ARG2P40360 574 aa11.77□□□□□ -0.52
SIM1YIL123W NOP13P53883 403 aaKnown RBP RIP-Chip data11.77□□□□□ -0.52not detected
SIM1YIL123W MZM1Q03429 123 aaPredicted RBP11.77□□□□□ -0.52
SIM1YIL123W TRE1Q08919 783 aa11.77□□□□□ -0.52
SIM1YIL123W LAA1P39526 2014 aa11.77□□□□□ -0.52
SIM1YIL123W MOT1P32333 1867 aa11.77□□□□□ -0.52
SIM1YIL123W SEC1P30619 724 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 156.6 ms