RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	RNR1	P21524	888 aa	Known RBP	3.91	□□□□□ -1.78
VHR1	YIL056W	TSR4	P25040	408 aa		3.91	□□□□□ -1.78
VHR1	YIL056W	BCD1	P38772	366 aa		3.91	□□□□□ -1.78
VHR1	YIL056W	ARP4	P80428	489 aa		3.91	□□□□□ -1.78
VHR1	YIL056W	MTQ2	Q03920	221 aa	Predicted RBP	3.91	□□□□□ -1.78
VHR1	YIL056W	OMS1	Q06668	471 aa		3.91	□□□□□ -1.78
VHR1	YIL056W	VHS3	Q08438	674 aa		3.91	□□□□□ -1.78
VHR1	YIL056W	MCH5	Q08777	521 aa		3.91	□□□□□ -1.78
VHR1	YIL056W	STB4	P50104	949 aa		3.9	□□□□□ -1.78
VHR1	YIL056W	RIA1	P53893	1110 aa		3.9	□□□□□ -1.78
VHR1	YIL056W	YHM2	Q04013	314 aa		3.9	□□□□□ -1.78
VHR1	YIL056W	YTM1	Q12024	460 aa	Predicted RBP	3.9	□□□□□ -1.78
VHR1	YIL056W	ECM3	Q99252	613 aa		3.9	□□□□□ -1.78
VHR1	YIL056W	ERG20	P08524	352 aa	Known RBP	3.89	□□□□□ -1.79
VHR1	YIL056W	YHL017W	P38745	532 aa		3.89	□□□□□ -1.79
VHR1	YIL056W	SSZ1	P38788	538 aa	Known RBP	3.89	□□□□□ -1.79
VHR1	YIL056W	YEN1	P40028	759 aa		3.89	□□□□□ -1.79
VHR1	YIL056W	BRE5	P53741	515 aa	Known RBP	3.89	□□□□□ -1.79
VHR1	YIL056W	SSL2	Q00578	843 aa		3.89	□□□□□ -1.79
VHR1	YIL056W	LEE1	Q02799	301 aa	Known RBP	3.89	□□□□□ -1.79
VHR1	YIL056W	RPS9B	P05755	195 aa	Known RBP	3.89	□□□□□ -1.79
VHR1	YIL056W	CDC43	P18898	376 aa		3.89	□□□□□ -1.79
VHR1	YIL056W	OAR1	P35731	278 aa		3.89	□□□□□ -1.79
VHR1	YIL056W	SFB3	P38810	929 aa		3.89	□□□□□ -1.79
VHR1	YIL056W	NUP60	P39705	539 aa		3.89	□□□□□ -1.79
VHR1	YIL056W	FMP52	P40008	231 aa		3.89	□□□□□ -1.79
VHR1	YIL056W	YNL195C	P40168	261 aa		3.89	□□□□□ -1.79
VHR1	YIL056W	YJR039W	P47107	1121 aa		3.89	□□□□□ -1.79
VHR1	YIL056W	UBC11	P52492	156 aa		3.89	□□□□□ -1.79
VHR1	YIL056W	PTA1	Q01329	785 aa	Predicted RBP	3.89	□□□□□ -1.79
VHR1	YIL056W	MUK1	Q02866	612 aa		3.89	□□□□□ -1.79
VHR1	YIL056W	DCS2	Q12123	353 aa		3.89	□□□□□ -1.79
VHR1	YIL056W	ZRT2	Q12436	422 aa		3.89	□□□□□ -1.79
VHR1	YIL056W	FMO1	P38866	432 aa		3.88	□□□□□ -1.79
VHR1	YIL056W	DUN1	P39009	513 aa		3.88	□□□□□ -1.79
VHR1	YIL056W	HOS4	P40480	1083 aa		3.88	□□□□□ -1.79
VHR1	YIL056W	GZF3	P42944	551 aa	Known RBP	3.88	□□□□□ -1.79
VHR1	YIL056W	YAP1802	P53309	568 aa		3.88	□□□□□ -1.79
VHR1	YIL056W	ERG6	P25087	383 aa	Known RBP	3.87	□□□□□ -1.79
VHR1	YIL056W	SEC65	P29478	273 aa		3.87	□□□□□ -1.79
VHR1	YIL056W	AKL1	P38080	1108 aa	Known RBP	3.87	□□□□□ -1.79
VHR1	YIL056W	MOH1	P38191	138 aa		3.87	□□□□□ -1.79
VHR1	YIL056W	CHS7	P38843	316 aa		3.87	□□□□□ -1.79
VHR1	YIL056W	NUG1	P40010	520 aa	Known RBP	3.87	□□□□□ -1.79
VHR1	YIL056W	PIG2	P40187	538 aa		3.87	□□□□□ -1.79
VHR1	YIL056W	STU2	P46675	888 aa		3.87	□□□□□ -1.79
VHR1	YIL056W	TEL2	P53038	688 aa		3.87	□□□□□ -1.79
VHR1	YIL056W	VBA4	Q04602	768 aa	Known RBP	3.87	□□□□□ -1.79
VHR1	YIL056W	CLF1	Q12309	687 aa	Predicted RBP	3.87	□□□□□ -1.79
VHR1	YIL056W	YKL033W-A	Q86ZR7	236 aa		3.87	□□□□□ -1.79
VHR1	YIL056W	HRP1	Q99383	534 aa	Known RBP	3.87	□□□□□ -1.79
VHR1	YIL056W	PAN2	P53010	1115 aa	Predicted RBP	3.87	□□□□□ -1.79
VHR1	YIL056W	IMG2	P25642	146 aa	Predicted RBP	3.86	□□□□□ -1.79
VHR1	YIL056W	DID4	P36108	232 aa		3.86	□□□□□ -1.79
VHR1	YIL056W	BAP3	P41815	604 aa		3.86	□□□□□ -1.79
VHR1	YIL056W	RSC8	P43609	557 aa	Known RBP	3.86	□□□□□ -1.79
VHR1	YIL056W	YLR407W	Q06070	228 aa		3.86	□□□□□ -1.79
VHR1	YIL056W	PET127	P32606	800 aa		3.85	□□□□□ -1.79
VHR1	YIL056W	LYS9	P38999	446 aa		3.85	□□□□□ -1.79
VHR1	YIL056W	UBP12	P39538	1254 aa		3.85	□□□□□ -1.79
VHR1	YIL056W	OAF1	P39720	1047 aa	Predicted RBP	3.85	□□□□□ -1.79
VHR1	YIL056W	MNN11	P46985	422 aa	Known RBP	3.85	□□□□□ -1.79
VHR1	YIL056W	NOP9	P47077	666 aa	Known RBP	3.85	□□□□□ -1.79
VHR1	YIL056W	FRS1	P15624	595 aa	Known RBP	3.85	□□□□□ -1.79
VHR1	YIL056W	KIN3	P22209	435 aa		3.85	□□□□□ -1.79
VHR1	YIL056W	PEX1	P24004	1043 aa		3.85	□□□□□ -1.79
VHR1	YIL056W	PRP22	P24384	1145 aa	Known RBP	3.85	□□□□□ -1.79
VHR1	YIL056W	KIN82	P25341	720 aa		3.85	□□□□□ -1.79
VHR1	YIL056W	HIR1	P32479	840 aa		3.85	□□□□□ -1.79
VHR1	YIL056W	GET2	P40056	285 aa		3.85	□□□□□ -1.79
VHR1	YIL056W	GPP1	P41277	250 aa	Known RBP	3.85	□□□□□ -1.79
VHR1	YIL056W	RPS21B	Q3E754	87 aa	Known RBP	3.85	□□□□□ -1.79
VHR1	YIL056W	ABF1	P14164	731 aa		3.84	□□□□□ -1.79
VHR1	YIL056W	YKU70	P32807	602 aa		3.84	□□□□□ -1.79
VHR1	YIL056W	GID8	P40208	455 aa		3.84	□□□□□ -1.79
VHR1	YIL056W	SLI1	P53304	468 aa		3.84	□□□□□ -1.79
VHR1	YIL056W	GND2	P53319	492 aa		3.84	□□□□□ -1.79
VHR1	YIL056W	ECM9	Q02202	377 aa		3.84	□□□□□ -1.79
VHR1	YIL056W	TRE2	Q08693	809 aa		3.84	□□□□□ -1.79
VHR1	YIL056W	POM34	Q12445	299 aa		3.84	□□□□□ -1.79
VHR1	YIL056W	RPS17A	P02407	136 aa	Known RBP	3.83	□□□□□ -1.8
VHR1	YIL056W	RPS17B	P14127	136 aa	Known RBP	3.83	□□□□□ -1.8
VHR1	YIL056W	PHO11	P35842	467 aa		3.83	□□□□□ -1.8
VHR1	YIL056W	PHO12	P38693	467 aa		3.83	□□□□□ -1.8
VHR1	YIL056W	BEM4	P39011	633 aa		3.83	□□□□□ -1.8
VHR1	YIL056W	PEA2	P40091	420 aa		3.83	□□□□□ -1.8
VHR1	YIL056W	CCT5	P40413	562 aa	Known RBP	3.83	□□□□□ -1.8
VHR1	YIL056W	YIL077C	P40508	320 aa		3.83	□□□□□ -1.8
VHR1	YIL056W	PXA1	P41909	870 aa		3.83	□□□□□ -1.8
VHR1	YIL056W	PPN1	Q04119	674 aa		3.83	□□□□□ -1.8
VHR1	YIL056W	VPS36	Q06696	566 aa		3.83	□□□□□ -1.8
VHR1	YIL056W	RMP1	Q12530	201 aa		3.83	□□□□□ -1.8
VHR1	YIL056W	NTH1	P32356	751 aa		3.83	□□□□□ -1.8
VHR1	YIL056W	ARG2	P40360	574 aa		3.83	□□□□□ -1.8
VHR1	YIL056W	NDC80	P40460	691 aa		3.83	□□□□□ -1.8
VHR1	YIL056W	CTR1	P49573	406 aa		3.83	□□□□□ -1.8
VHR1	YIL056W	RNR4	P49723	345 aa	Known RBP	3.83	□□□□□ -1.8
VHR1	YIL056W	GPG1	P53130	126 aa		3.83	□□□□□ -1.8
VHR1	YIL056W	TMN2	Q04562	672 aa		3.83	□□□□□ -1.8
VHR1	YIL056W	USV1	Q12132	391 aa		3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms