RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeast

Gene RTA1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTA1	YGR213C	TDA3	P38758	523 aa		4.91	□□□□□ -1.62
RTA1	YGR213C	LYS9	P38999	446 aa		4.91	□□□□□ -1.62
RTA1	YGR213C	FUN12	P39730	1002 aa	Known RBP	4.91	□□□□□ -1.62
RTA1	YGR213C	NUG1	P40010	520 aa	Known RBP	4.91	□□□□□ -1.62
RTA1	YGR213C	CCT5	P40413	562 aa	Known RBP	4.91	□□□□□ -1.62
RTA1	YGR213C	GPP1	P41277	250 aa	Known RBP	4.91	□□□□□ -1.62
RTA1	YGR213C	GZF3	P42944	551 aa	Known RBP	4.91	□□□□□ -1.62
RTA1	YGR213C	TCB2	P48231	1178 aa		4.91	□□□□□ -1.62
RTA1	YGR213C	MTL1	P53214	551 aa		4.91	□□□□□ -1.62
RTA1	YGR213C	GPD1	Q00055	391 aa	Known RBP	4.91	□□□□□ -1.62
RTA1	YGR213C	CTK1	Q03957	528 aa	Known RBP	4.91	□□□□□ -1.62
RTA1	YGR213C	HFD1	Q04458	532 aa		4.91	□□□□□ -1.62
RTA1	YGR213C	IRC13	Q08630	104 aa		4.91	□□□□□ -1.62
RTA1	YGR213C	GRX4	P32642	244 aa		4.9	□□□□□ -1.63
RTA1	YGR213C	PPS1	P38148	807 aa		4.9	□□□□□ -1.63
RTA1	YGR213C	BCD1	P38772	366 aa		4.9	□□□□□ -1.63
RTA1	YGR213C	UBC11	P52492	156 aa		4.9	□□□□□ -1.63
RTA1	YGR213C	YTM1	Q12024	460 aa	Predicted RBP	4.9	□□□□□ -1.63
RTA1	YGR213C	PYC1	P11154	1178 aa	Known RBP	4.89	□□□□□ -1.63
RTA1	YGR213C	RNR1	P21524	888 aa	Known RBP	4.89	□□□□□ -1.63
RTA1	YGR213C	YHR202W	P38887	602 aa		4.89	□□□□□ -1.63
RTA1	YGR213C	CCT3	P39077	534 aa	Known RBP	4.89	□□□□□ -1.63
RTA1	YGR213C	OAF1	P39720	1047 aa	Predicted RBP	4.89	□□□□□ -1.63
RTA1	YGR213C	YGR153W	P48238	217 aa		4.89	□□□□□ -1.63
RTA1	YGR213C	ECM9	Q02202	377 aa		4.89	□□□□□ -1.63
RTA1	YGR213C	OMS1	Q06668	471 aa		4.89	□□□□□ -1.63
RTA1	YGR213C	FAP7	Q12055	197 aa	Predicted RBP	4.89	□□□□□ -1.63
RTA1	YGR213C	RNA1	P11745	407 aa	Known RBP	4.88	□□□□□ -1.63
RTA1	YGR213C	RPS0A	P32905	252 aa	Known RBP	4.88	□□□□□ -1.63
RTA1	YGR213C	FMO1	P38866	432 aa		4.88	□□□□□ -1.63
RTA1	YGR213C	NUP60	P39705	539 aa		4.88	□□□□□ -1.63
RTA1	YGR213C	FMP52	P40008	231 aa		4.88	□□□□□ -1.63
RTA1	YGR213C	YEN1	P40028	759 aa		4.88	□□□□□ -1.63
RTA1	YGR213C	GET2	P40056	285 aa		4.88	□□□□□ -1.63
RTA1	YGR213C	NOP9	P47077	666 aa	Known RBP	4.88	□□□□□ -1.63
RTA1	YGR213C	SIR3	P06701	978 aa		4.87	□□□□□ -1.63
RTA1	YGR213C	SWI6	P09959	803 aa		4.87	□□□□□ -1.63
RTA1	YGR213C	PEX1	P24004	1043 aa		4.87	□□□□□ -1.63
RTA1	YGR213C	HIR1	P32479	840 aa		4.87	□□□□□ -1.63
RTA1	YGR213C	HIS7	P33734	552 aa	Known RBP	4.87	□□□□□ -1.63
RTA1	YGR213C	OAR1	P35731	278 aa		4.87	□□□□□ -1.63
RTA1	YGR213C	YKR075C	P36155	307 aa		4.87	□□□□□ -1.63
RTA1	YGR213C	RIX1	P38883	763 aa	Predicted RBP	4.87	□□□□□ -1.63
RTA1	YGR213C	HXT6	P39003	570 aa	Known RBP	4.87	□□□□□ -1.63
RTA1	YGR213C	HXT7	P39004	570 aa		4.87	□□□□□ -1.63
RTA1	YGR213C	MNN11	P46985	422 aa	Known RBP	4.87	□□□□□ -1.63
RTA1	YGR213C	DAS1	P47005	663 aa		4.87	□□□□□ -1.63
RTA1	YGR213C	BFA1	P47113	574 aa		4.87	□□□□□ -1.63
RTA1	YGR213C	MUK1	Q02866	612 aa		4.87	□□□□□ -1.63
RTA1	YGR213C	ISA1	Q07821	250 aa	Predicted RBP	4.87	□□□□□ -1.63
RTA1	YGR213C	ACF2	Q12168	779 aa		4.87	□□□□□ -1.63
RTA1	YGR213C	RPS21B	Q3E754	87 aa	Known RBP	4.87	□□□□□ -1.63
RTA1	YGR213C	SKI3	P17883	1432 aa	Known RBP	4.87	□□□□□ -1.63
RTA1	YGR213C	IMG2	P25642	146 aa	Predicted RBP	4.86	□□□□□ -1.63
RTA1	YGR213C	YPT7	P32939	208 aa		4.86	□□□□□ -1.63
RTA1	YGR213C	MOH1	P38191	138 aa		4.86	□□□□□ -1.63
RTA1	YGR213C	YHL017W	P38745	532 aa		4.86	□□□□□ -1.63
RTA1	YGR213C	YNL195C	P40168	261 aa		4.86	□□□□□ -1.63
RTA1	YGR213C	RSC8	P43609	557 aa	Known RBP	4.86	□□□□□ -1.63
RTA1	YGR213C	COX18	P53239	316 aa		4.86	□□□□□ -1.63
RTA1	YGR213C	RIA1	P53893	1110 aa		4.86	□□□□□ -1.63
RTA1	YGR213C	YMR206W	Q03695	313 aa		4.86	□□□□□ -1.63
RTA1	YGR213C	YLR407W	Q06070	228 aa		4.86	□□□□□ -1.63
RTA1	YGR213C	RGC1	Q06108	1083 aa	Known RBP	4.86	□□□□□ -1.63
RTA1	YGR213C	SGO1	Q08490	590 aa		4.86	□□□□□ -1.63
RTA1	YGR213C	HFI1	Q12060	488 aa		4.86	□□□□□ -1.63
RTA1	YGR213C	APM4	Q99186	491 aa		4.86	□□□□□ -1.63
RTA1	YGR213C	ECM3	Q99252	613 aa		4.86	□□□□□ -1.63
RTA1	YGR213C	TSR4	P25040	408 aa		4.85	□□□□□ -1.63
RTA1	YGR213C	YKU70	P32807	602 aa		4.85	□□□□□ -1.63
RTA1	YGR213C	OAF3	P36023	863 aa		4.85	□□□□□ -1.63
RTA1	YGR213C	DID4	P36108	232 aa		4.85	□□□□□ -1.63
RTA1	YGR213C	REV7	P38927	245 aa		4.85	□□□□□ -1.63
RTA1	YGR213C	STB4	P50104	949 aa		4.85	□□□□□ -1.63
RTA1	YGR213C	YMR210W	Q03649	449 aa		4.85	□□□□□ -1.63
RTA1	YGR213C	VHS3	Q08438	674 aa		4.85	□□□□□ -1.63
RTA1	YGR213C	MVD1	P32377	396 aa	Known RBP	4.84	□□□□□ -1.63
RTA1	YGR213C	PET127	P32606	800 aa		4.84	□□□□□ -1.63
RTA1	YGR213C	SEC6	P32844	805 aa		4.84	□□□□□ -1.63
RTA1	YGR213C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
RTA1	YGR213C	PAN2	P53010	1115 aa	Predicted RBP	4.84	□□□□□ -1.63
RTA1	YGR213C	TEL2	P53038	688 aa		4.84	□□□□□ -1.63
RTA1	YGR213C	YAP1802	P53309	568 aa		4.84	□□□□□ -1.63
RTA1	YGR213C	THI22	Q06490	572 aa		4.84	□□□□□ -1.63
RTA1	YGR213C	VPS36	Q06696	566 aa		4.84	□□□□□ -1.63
RTA1	YGR213C	DIA2	Q08496	732 aa	Predicted RBP	4.84	□□□□□ -1.63
RTA1	YGR213C	YKL033W-A	Q86ZR7	236 aa		4.84	□□□□□ -1.63
RTA1	YGR213C	RPS21A	P0C0V8	87 aa	Known RBP	4.83	□□□□□ -1.64
RTA1	YGR213C	FRS1	P15624	595 aa	Known RBP	4.83	□□□□□ -1.64
RTA1	YGR213C	SEC65	P29478	273 aa		4.83	□□□□□ -1.64
RTA1	YGR213C	SFB3	P38810	929 aa		4.83	□□□□□ -1.64
RTA1	YGR213C	MDG1	P53885	366 aa		4.83	□□□□□ -1.64
RTA1	YGR213C	NOP15	P53927	220 aa	Predicted RBP	4.83	□□□□□ -1.64
RTA1	YGR213C	YHM2	Q04013	314 aa		4.83	□□□□□ -1.64
RTA1	YGR213C	YPS7	Q06325	596 aa		4.83	□□□□□ -1.64
RTA1	YGR213C	MCH5	Q08777	521 aa		4.83	□□□□□ -1.64
RTA1	YGR213C	ERG20	P08524	352 aa	Known RBP	4.82	□□□□□ -1.64
RTA1	YGR213C	IME1	P21190	360 aa		4.82	□□□□□ -1.64
RTA1	YGR213C	EUG1	P32474	517 aa		4.82	□□□□□ -1.64
RTA1	YGR213C	TOA1	P32773	286 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms