RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeast

Gene VMA21, Length 234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA21	YGR105W	GUD1	Q07729	489 aa		4.22	□□□□□ -1.73
VMA21	YGR105W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
VMA21	YGR105W	ECM3	Q99252	613 aa		4.22	□□□□□ -1.73
VMA21	YGR105W	PYC1	P11154	1178 aa	Known RBP	4.21	□□□□□ -1.74
VMA21	YGR105W	KIN3	P22209	435 aa		4.21	□□□□□ -1.74
VMA21	YGR105W	SFP1	P32432	683 aa		4.21	□□□□□ -1.74
VMA21	YGR105W	PHO11	P35842	467 aa		4.21	□□□□□ -1.74
VMA21	YGR105W	APN2	P38207	520 aa		4.21	□□□□□ -1.74
VMA21	YGR105W	PHO12	P38693	467 aa		4.21	□□□□□ -1.74
VMA21	YGR105W	NOP9	P47077	666 aa	Known RBP	4.21	□□□□□ -1.74
VMA21	YGR105W	YAP1802	P53309	568 aa		4.21	□□□□□ -1.74
VMA21	YGR105W	ORC1	P54784	914 aa	Predicted RBP	4.21	□□□□□ -1.74
VMA21	YGR105W	DNM1	P54861	757 aa		4.21	□□□□□ -1.74
VMA21	YGR105W	SMX3	P54999	86 aa	Predicted RBP	4.21	□□□□□ -1.74
VMA21	YGR105W	GIS1	Q03833	894 aa		4.21	□□□□□ -1.74
VMA21	YGR105W	MLH3	Q12083	715 aa		4.21	□□□□□ -1.74
VMA21	YGR105W	DCS2	Q12123	353 aa		4.21	□□□□□ -1.74
VMA21	YGR105W	SUT2	Q12286	268 aa		4.21	□□□□□ -1.74
VMA21	YGR105W	CDC43	P18898	376 aa		4.2	□□□□□ -1.74
VMA21	YGR105W	AKL1	P38080	1108 aa	Known RBP	4.2	□□□□□ -1.74
VMA21	YGR105W	TDP1	P38319	544 aa		4.2	□□□□□ -1.74
VMA21	YGR105W	SSZ1	P38788	538 aa	Known RBP	4.2	□□□□□ -1.74
VMA21	YGR105W	NMD2	P38798	1089 aa	Known RBP	4.2	□□□□□ -1.74
VMA21	YGR105W	MGS1	P40151	587 aa		4.2	□□□□□ -1.74
VMA21	YGR105W	YJR039W	P47107	1121 aa		4.2	□□□□□ -1.74
VMA21	YGR105W	SDA1	P53313	767 aa	Known RBP	4.2	□□□□□ -1.74
VMA21	YGR105W	ISA1	Q07821	250 aa	Predicted RBP	4.2	□□□□□ -1.74
VMA21	YGR105W	ZRT2	Q12436	422 aa		4.2	□□□□□ -1.74
VMA21	YGR105W	ADR1	P07248	1323 aa		4.2	□□□□□ -1.74
VMA21	YGR105W	PEX1	P24004	1043 aa		4.19	□□□□□ -1.74
VMA21	YGR105W	CRP1	P38845	465 aa	Known RBP	4.19	□□□□□ -1.74
VMA21	YGR105W	YHR202W	P38887	602 aa		4.19	□□□□□ -1.74
VMA21	YGR105W	NUG1	P40010	520 aa	Known RBP	4.19	□□□□□ -1.74
VMA21	YGR105W	NDC80	P40460	691 aa		4.19	□□□□□ -1.74
VMA21	YGR105W	RSC8	P43609	557 aa	Known RBP	4.19	□□□□□ -1.74
VMA21	YGR105W	VPS73	P53142	486 aa	Known RBP	4.19	□□□□□ -1.74
VMA21	YGR105W	FHN1	P53279	174 aa		4.19	□□□□□ -1.74
VMA21	YGR105W	GPD1	Q00055	391 aa	Known RBP	4.19	□□□□□ -1.74
VMA21	YGR105W	UBS1	P38290	277 aa		4.18	□□□□□ -1.74
VMA21	YGR105W	YJL206C	P39529	758 aa		4.18	□□□□□ -1.74
VMA21	YGR105W	CCT7	P42943	550 aa	Known RBP	4.18	□□□□□ -1.74
VMA21	YGR105W	GFA1	P14742	717 aa	Known RBP	4.17	□□□□□ -1.74
VMA21	YGR105W	THR1	P17423	357 aa	Known RBP	4.17	□□□□□ -1.74
VMA21	YGR105W	TAH11	P47112	604 aa		4.17	□□□□□ -1.74
VMA21	YGR105W	THI22	Q06490	572 aa		4.17	□□□□□ -1.74
VMA21	YGR105W	VPS36	Q06696	566 aa		4.17	□□□□□ -1.74
VMA21	YGR105W	DIA2	Q08496	732 aa	Predicted RBP	4.17	□□□□□ -1.74
VMA21	YGR105W	USV1	Q12132	391 aa		4.17	□□□□□ -1.74
VMA21	YGR105W	BCS1	P32839	456 aa		4.16	□□□□□ -1.74
VMA21	YGR105W	BEM4	P39011	633 aa		4.16	□□□□□ -1.74
VMA21	YGR105W	ARG2	P40360	574 aa		4.16	□□□□□ -1.74
VMA21	YGR105W	YJR096W	P47137	282 aa		4.16	□□□□□ -1.74
VMA21	YGR105W	HLJ1	P48353	224 aa		4.16	□□□□□ -1.74
VMA21	YGR105W	CTR1	P49573	406 aa		4.16	□□□□□ -1.74
VMA21	YGR105W	ATG4	P53867	494 aa		4.16	□□□□□ -1.74
VMA21	YGR105W	TAF3	Q12297	353 aa		4.16	□□□□□ -1.74
VMA21	YGR105W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
VMA21	YGR105W	SET3	P36124	751 aa		4.15	□□□□□ -1.75
VMA21	YGR105W	GLG1	P36143	616 aa		4.15	□□□□□ -1.75
VMA21	YGR105W	YKR075C	P36155	307 aa		4.15	□□□□□ -1.75
VMA21	YGR105W	MAL31	P38156	614 aa		4.15	□□□□□ -1.75
VMA21	YGR105W	VHS3	Q08438	674 aa		4.15	□□□□□ -1.75
VMA21	YGR105W	HCA4	P20448	770 aa	Known RBP	4.14	□□□□□ -1.75
VMA21	YGR105W	DMC1	P25453	334 aa		4.14	□□□□□ -1.75
VMA21	YGR105W	IMG2	P25642	146 aa	Predicted RBP	4.14	□□□□□ -1.75
VMA21	YGR105W	SEC6	P32844	805 aa		4.14	□□□□□ -1.75
VMA21	YGR105W	PPZ2	P33329	710 aa		4.14	□□□□□ -1.75
VMA21	YGR105W	BIT2	P38346	545 aa		4.14	□□□□□ -1.75
VMA21	YGR105W	TDA3	P38758	523 aa		4.14	□□□□□ -1.75
VMA21	YGR105W	CKB2	P38930	258 aa		4.14	□□□□□ -1.75
VMA21	YGR105W	PIG2	P40187	538 aa		4.14	□□□□□ -1.75
VMA21	YGR105W	YJR142W	P47173	342 aa		4.14	□□□□□ -1.75
VMA21	YGR105W	UTP14	Q04500	899 aa	Known RBP	4.14	□□□□□ -1.75
VMA21	YGR105W	YLR407W	Q06070	228 aa		4.14	□□□□□ -1.75
VMA21	YGR105W	THI73	Q07904	523 aa		4.14	□□□□□ -1.75
VMA21	YGR105W	CLF1	Q12309	687 aa	Predicted RBP	4.14	□□□□□ -1.75
VMA21	YGR105W	FRS1	P15624	595 aa	Known RBP	4.13	□□□□□ -1.75
VMA21	YGR105W	FEN2	P25621	512 aa	Known RBP	4.13	□□□□□ -1.75
VMA21	YGR105W	PRP19	P32523	503 aa	Known RBP	4.13	□□□□□ -1.75
VMA21	YGR105W	PEX2	P32800	271 aa		4.13	□□□□□ -1.75
VMA21	YGR105W	EMP70	P32802	667 aa		4.13	□□□□□ -1.75
VMA21	YGR105W	YKU70	P32807	602 aa		4.13	□□□□□ -1.75
VMA21	YGR105W	YPT53	P36019	220 aa		4.13	□□□□□ -1.75
VMA21	YGR105W	TYS1	P36421	394 aa	Known RBP	4.13	□□□□□ -1.75
VMA21	YGR105W	YIL077C	P40508	320 aa		4.13	□□□□□ -1.75
VMA21	YGR105W	RET2	P43621	546 aa		4.13	□□□□□ -1.75
VMA21	YGR105W	BFA1	P47113	574 aa		4.13	□□□□□ -1.75
VMA21	YGR105W	YMR210W	Q03649	449 aa		4.13	□□□□□ -1.75
VMA21	YGR105W	CHS5	Q12114	671 aa	Known RBP	4.13	□□□□□ -1.75
VMA21	YGR105W	POM34	Q12445	299 aa		4.13	□□□□□ -1.75
VMA21	YGR105W	BNR1	P40450	1375 aa		4.13	□□□□□ -1.75
VMA21	YGR105W	ERG20	P08524	352 aa	Known RBP	4.12	□□□□□ -1.75
VMA21	YGR105W	PRP28	P23394	588 aa		4.12	□□□□□ -1.75
VMA21	YGR105W	PET127	P32606	800 aa		4.12	□□□□□ -1.75
VMA21	YGR105W	YPT7	P32939	208 aa		4.12	□□□□□ -1.75
VMA21	YGR105W	YHR097C	P38809	366 aa	Known RBP	4.12	□□□□□ -1.75
VMA21	YGR105W	BDH2	P39713	417 aa		4.12	□□□□□ -1.75
VMA21	YGR105W	ATF1	P40353	525 aa		4.12	□□□□□ -1.75
VMA21	YGR105W	BIT61	P47041	543 aa		4.12	□□□□□ -1.75
VMA21	YGR105W	RFX1	P48743	811 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms