RNA–Protein interactions for RNA: YER128W

VFA1, Transcript of Protein that interacts with Vps4p and has a role in vacuolar sorting, yeastyeast

Gene VFA1, Length 612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VFA1YER128W TOM71P38825 639 aaKnown RBP3.78□□□□□ -1.8
VFA1YER128W YHR218WP38899 603 aa3.78□□□□□ -1.8
VFA1YER128W SWD1P39706 426 aa3.78□□□□□ -1.8
VFA1YER128W BUD27P43573 796 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
VFA1YER128W ASI2P53895 289 aa3.78□□□□□ -1.8
VFA1YER128W ERB1Q04660 807 aaKnown RBP3.78□□□□□ -1.8
VFA1YER128W THI7Q05998 598 aa3.78□□□□□ -1.8
VFA1YER128W SLX4Q12098 748 aa3.78□□□□□ -1.8
VFA1YER128W NKP1Q12493 238 aa3.78□□□□□ -1.8
VFA1YER128W NOP14Q99207 810 aaKnown RBP3.78□□□□□ -1.8
VFA1YER128W MYO4P32492 1471 aa3.78□□□□□ -1.8
VFA1YER128W EDE1P34216 1381 aa3.77□□□□□ -1.81
VFA1YER128W HMG1P12683 1054 aa3.77□□□□□ -1.81
VFA1YER128W ADY2P25613 283 aa3.77□□□□□ -1.81
VFA1YER128W NGG1P32494 702 aa3.77□□□□□ -1.81
VFA1YER128W TMT1P32643 299 aa3.77□□□□□ -1.81
VFA1YER128W NFU1P32860 256 aa3.77□□□□□ -1.81
VFA1YER128W NUF2P33895 451 aa3.77□□□□□ -1.81
VFA1YER128W EFM2P38347 419 aa3.77□□□□□ -1.81
VFA1YER128W YLF2P38746 405 aa3.77□□□□□ -1.81
VFA1YER128W TCD1P38756 429 aa3.77□□□□□ -1.81
VFA1YER128W CIN4P39110 191 aa3.77□□□□□ -1.81
VFA1YER128W UBP12P39538 1254 aa3.77□□□□□ -1.81
VFA1YER128W PES4P39684 611 aa3.77□□□□□ -1.81
VFA1YER128W MEP1P40260 492 aa3.77□□□□□ -1.81
VFA1YER128W TPM2P40414 161 aa3.77□□□□□ -1.81
VFA1YER128W GPI8P49018 411 aa3.77□□□□□ -1.81
VFA1YER128W YDR338CQ05497 695 aa3.77□□□□□ -1.81
VFA1YER128W OPI10Q08202 246 aa3.77□□□□□ -1.81
VFA1YER128W IRC13Q08630 104 aa3.77□□□□□ -1.81
VFA1YER128W DMC1P25453 334 aa3.76□□□□□ -1.81
VFA1YER128W BUD14P27637 709 aa3.76□□□□□ -1.81
VFA1YER128W NIP100P33420 868 aa3.76□□□□□ -1.81
VFA1YER128W SAS3P34218 831 aa3.76□□□□□ -1.81
VFA1YER128W MRP8P35719 219 aa3.76□□□□□ -1.81
VFA1YER128W ERT1P38140 529 aa3.76□□□□□ -1.81
VFA1YER128W MAL31P38156 614 aa3.76□□□□□ -1.81
VFA1YER128W CBR1P38626 284 aaKnown RBP3.76□□□□□ -1.81
VFA1YER128W OCA5P38738 679 aa3.76□□□□□ -1.81
VFA1YER128W RIO2P40160 425 aaKnown RBP3.76□□□□□ -1.81
VFA1YER128W UTP18P40362 594 aaPredicted RBP3.76□□□□□ -1.81
VFA1YER128W YIR042CP40586 236 aa3.76□□□□□ -1.81
VFA1YER128W SET2P46995 733 aaKnown RBP3.76□□□□□ -1.81
VFA1YER128W IST1P53843 298 aaPredicted RBP3.76□□□□□ -1.81
VFA1YER128W TIM11P81449 96 aaPredicted RBP3.76□□□□□ -1.81
VFA1YER128W SEC5P89102 971 aa3.76□□□□□ -1.81
VFA1YER128W MDM1Q01846 1127 aa3.76□□□□□ -1.81
VFA1YER128W SPO19Q03029 223 aa3.76□□□□□ -1.81
VFA1YER128W LCD1Q04377 747 aa3.76□□□□□ -1.81
VFA1YER128W COG4Q06096 861 aa3.76□□□□□ -1.81
VFA1YER128W SGO1Q08490 590 aa3.76□□□□□ -1.81
VFA1YER128W CLP1Q08685 445 aaPredicted RBP3.76□□□□□ -1.81
VFA1YER128W SNU66Q12420 587 aaPredicted RBP3.76□□□□□ -1.81
VFA1YER128W CFT1Q06632 1357 aaKnown RBP3.76□□□□□ -1.81
VFA1YER128W CYB2P00175 591 aa3.75□□□□□ -1.81
VFA1YER128W PRI2P20457 528 aa3.75□□□□□ -1.81
VFA1YER128W PHO84P25297 587 aaKnown RBP3.75□□□□□ -1.81
VFA1YER128W SMY1P32364 656 aaKnown RBP3.75□□□□□ -1.81
VFA1YER128W REC104P33323 182 aa3.75□□□□□ -1.81
VFA1YER128W HIS7P33734 552 aaKnown RBP3.75□□□□□ -1.81
VFA1YER128W YKL069WP36088 180 aa3.75□□□□□ -1.81
VFA1YER128W PBY1P38254 753 aa3.75□□□□□ -1.81
VFA1YER128W GGA2P38817 585 aaKnown RBP3.75□□□□□ -1.81
VFA1YER128W SHC1P39000 512 aa3.75□□□□□ -1.81
VFA1YER128W PZF1P39933 429 aa3.75□□□□□ -1.81
VFA1YER128W TOK1P40310 691 aa3.75□□□□□ -1.81
VFA1YER128W MAD1P40957 749 aa3.75□□□□□ -1.81
VFA1YER128W ENP2P48234 707 aaKnown RBP3.75□□□□□ -1.81
VFA1YER128W GLO1P50107 326 aa3.75□□□□□ -1.81
VFA1YER128W DAM1P53267 343 aa3.75□□□□□ -1.81
VFA1YER128W SSL2Q00578 843 aa3.75□□□□□ -1.81
VFA1YER128W NRG1Q03125 231 aa3.75□□□□□ -1.81
VFA1YER128W CDC45Q08032 650 aa3.75□□□□□ -1.81
VFA1YER128W SLK19Q08581 821 aaKnown RBP3.75□□□□□ -1.81
VFA1YER128W PET494P07390 489 aaPredicted RBP3.74□□□□□ -1.81
VFA1YER128W RPB4P20433 221 aaPredicted RBP3.74□□□□□ -1.81
VFA1YER128W APN1P22936 367 aa3.74□□□□□ -1.81
VFA1YER128W RAD16P31244 790 aa3.74□□□□□ -1.81
VFA1YER128W TFC3P34111 1160 aa3.74□□□□□ -1.81
VFA1YER128W YEL1P34225 687 aa3.74□□□□□ -1.81
VFA1YER128W RKM3P38222 552 aa3.74□□□□□ -1.81
VFA1YER128W ERC1P38767 581 aa3.74□□□□□ -1.81
VFA1YER128W SPP41P38904 1435 aa3.74□□□□□ -1.81
VFA1YER128W YIR014WP40570 242 aa3.74□□□□□ -1.81
VFA1YER128W LAM5P43560 674 aa3.74□□□□□ -1.81
VFA1YER128W HSV2P50079 448 aaPredicted RBP3.74□□□□□ -1.81
VFA1YER128W REX2P54964 269 aaKnown RBP3.74□□□□□ -1.81
VFA1YER128W APM1Q00776 475 aaPredicted RBP3.74□□□□□ -1.81
VFA1YER128W BUL2Q03758 920 aaKnown RBP3.74□□□□□ -1.81
VFA1YER128W YMR111CQ04461 462 aaPredicted RBP3.74□□□□□ -1.81
VFA1YER128W PHM6Q05637 104 aa3.74□□□□□ -1.81
VFA1YER128W ENT2Q05785 613 aa3.74□□□□□ -1.81
VFA1YER128W SSF2Q12153 453 aaPredicted RBP3.74□□□□□ -1.81
VFA1YER128W YOL087CQ99247 1116 aa3.74□□□□□ -1.81
VFA1YER128W RAD9P14737 1309 aa3.73□□□□□ -1.81
VFA1YER128W SSK22P25390 1331 aaPredicted RBP3.73□□□□□ -1.81
VFA1YER128W MPH2P0CD99 609 aa3.73□□□□□ -1.81
VFA1YER128W SEC15P22224 910 aa3.73□□□□□ -1.81
VFA1YER128W SPO11P23179 398 aa3.73□□□□□ -1.81
VFA1YER128W RRP1P35178 278 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms