RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	FTR1	P40088	404 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	SPO22	P40511	975 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	INA22	P40576	216 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	STB1	P42845	420 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	SLS1	P42900	643 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	YGL176C	P46945	554 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	YGL242C	P53066	181 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	DSE4	P53753	1117 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	VPS75	P53853	264 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	IPI3	P53877	555 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	PGA2	P53903	129 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	YNL144C	P53907	740 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	COG6	P53959	839 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	SSL2	Q00578	843 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	MEH1	Q02205	184 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	RSM28	Q03430	361 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	ECM11	Q04110	302 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	HFD1	Q04458	532 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	RRN11	Q04712	507 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	YLR287C	Q05881	355 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	SGD1	Q06132	899 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	MRL1	Q06815	381 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	RIX7	Q07844	837 aa	Known RBP	4.85	□□□□□ -1.63
TFB3	YDR460W	VHS3	Q08438	674 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	THI72	Q08579	599 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	APC5	Q08683	685 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	RTT10	Q08924	1013 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	YLR278C	Q05854	1341 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	RPS24A	P0CX31	135 aa	Known RBP	4.84	□□□□□ -1.63
TFB3	YDR460W	RPS24B	P0CX32	135 aa	Known RBP	4.84	□□□□□ -1.63
TFB3	YDR460W	RAD4	P14736	754 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	ERS1	P17261	260 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	VMA8	P32610	256 aa	Known RBP	4.84	□□□□□ -1.63
TFB3	YDR460W	ARC19	P33204	171 aa	Known RBP	4.84	□□□□□ -1.63
TFB3	YDR460W	PRX1	P34227	261 aa	Known RBP	4.84	□□□□□ -1.63
TFB3	YDR460W	BLI1	P35727	113 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	YKT6	P36015	200 aa	Known RBP	4.84	□□□□□ -1.63
TFB3	YDR460W	UIP5	P36137	443 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	FZO1	P38297	855 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	FCY21	P40039	528 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	SER3	P40054	469 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	IES5	P40060	125 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	SIP5	P40210	489 aa	Known RBP	4.84	□□□□□ -1.63
TFB3	YDR460W	YFL066C	P43538	392 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	STB2	P46679	850 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	YJR054W	P47114	497 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	YJR142W	P47173	342 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	RBL2	P48606	106 aa	Known RBP	4.84	□□□□□ -1.63
TFB3	YDR460W	YGL082W	P53155	381 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	CWC24	P53769	259 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	ADE16	P54113	591 aa	Known RBP	4.84	□□□□□ -1.63
TFB3	YDR460W	ALD6	P54115	500 aa	Known RBP	4.84	□□□□□ -1.63
TFB3	YDR460W	BET4	Q00618	327 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	PLP1	Q04004	230 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	MGR3	Q04472	501 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	NNT1	Q05874	261 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	YLH47	Q06493	454 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	AOS1	Q06624	347 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	HDA2	Q06629	674 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	BRE1	Q07457	700 aa	Known RBP	4.84	□□□□□ -1.63
TFB3	YDR460W	MET7	Q08645	548 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	ICL2	Q12031	575 aa		4.84	□□□□□ -1.63
TFB3	YDR460W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
TFB3	YDR460W	ADH4	P10127	382 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	GCN3	P14741	305 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	CLB2	P24869	491 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	SEC21	P32074	935 aa	Known RBP	4.83	□□□□□ -1.64
TFB3	YDR460W	SRB4	P32569	687 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	CSE1	P33307	960 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	DUT1	P33317	147 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	MCX1	P38323	520 aa	Predicted RBP	4.83	□□□□□ -1.64
TFB3	YDR460W	EFM2	P38347	419 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	RCK2	P38623	610 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	STP2	P38704	541 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	UBP12	P39538	1254 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	VAC8	P39968	578 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	IES1	P43579	692 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	DAS1	P47005	663 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	ALB1	P47019	175 aa	Predicted RBP	4.83	□□□□□ -1.64
TFB3	YDR460W	MDV1	P47025	714 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	NOP9	P47077	666 aa	Known RBP	4.83	□□□□□ -1.64
TFB3	YDR460W	GNP1	P48813	663 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	NUP84	P52891	726 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	SDA1	P53313	767 aa	Known RBP	4.83	□□□□□ -1.64
TFB3	YDR460W	FYV6	P53913	173 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	HEF3	P53978	1044 aa	Known RBP	4.83	□□□□□ -1.64
TFB3	YDR460W	TIM11	P81449	96 aa	Predicted RBP	4.83	□□□□□ -1.64
TFB3	YDR460W	UTP5	Q04177	643 aa	Known RBP	4.83	□□□□□ -1.64
TFB3	YDR460W	HEL2	Q05580	639 aa	Known RBP	4.83	□□□□□ -1.64
TFB3	YDR460W	VPS38	Q05919	439 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	SSQ1	Q05931	657 aa	Predicted RBP	4.83	□□□□□ -1.64
TFB3	YDR460W	PSR1	Q07800	427 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	RKM1	Q08961	583 aa	Predicted RBP	4.83	□□□□□ -1.64
TFB3	YDR460W	REC8	Q12188	680 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	TAF3	Q12297	353 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	GPR1	Q12361	961 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	OCA6	Q12454	224 aa		4.83	□□□□□ -1.64
TFB3	YDR460W	MLP1	Q02455	1875 aa	Known RBP	4.82	□□□□□ -1.64
TFB3	YDR460W	LEU2	P04173	364 aa	Predicted RBP	4.82	□□□□□ -1.64
TFB3	YDR460W	RPS3	P05750	240 aa	Known RBP	4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms