RNA–Protein interactions for RNA: YDR323C

PEP7, Transcript of Adaptor protein involved in vesicle-mediated vacuolar protein sorting, yeast

Gene PEP7, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEP7	YDR323C	CDA2	Q06703	312 aa		4.17	□□□□□ -1.74
PEP7	YDR323C	OPY2	Q06810	360 aa		4.17	□□□□□ -1.74
PEP7	YDR323C	NBA1	Q08229	501 aa	Known RBP	4.17	□□□□□ -1.74
PEP7	YDR323C	RSB1	Q08417	382 aa		4.17	□□□□□ -1.74
PEP7	YDR323C	TRE1	Q08919	783 aa		4.17	□□□□□ -1.74
PEP7	YDR323C	RRG1	Q12167	365 aa	Predicted RBP	4.17	□□□□□ -1.74
PEP7	YDR323C	SCM3	Q12334	223 aa		4.17	□□□□□ -1.74
PEP7	YDR323C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
PEP7	YDR323C	HSH49	Q99181	213 aa	Predicted RBP	4.17	□□□□□ -1.74
PEP7	YDR323C	VMA2	P16140	517 aa	Known RBP	4.16	□□□□□ -1.74
PEP7	YDR323C	PHO84	P25297	587 aa	Known RBP	4.16	□□□□□ -1.74
PEP7	YDR323C	YCR015C	P25616	317 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	RIB7	P33312	244 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	SAP190	P36123	1033 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	CCL1	P37366	393 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	SPC72	P39723	622 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	GPG1	P53130	126 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	NNF2	P53253	936 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	PNG1	Q02890	363 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	UGO1	Q03327	502 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	HRQ1	Q05549	1077 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	MLC2	Q06580	163 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	ADY3	Q07732	790 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	RCL1	Q08096	367 aa	Predicted RBP	4.16	□□□□□ -1.74
PEP7	YDR323C	SMF3	Q12078	473 aa	Predicted RBP	4.16	□□□□□ -1.74
PEP7	YDR323C	BI4	P03879	638 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	SAM35	P14693	329 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	REC107	P21651	314 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	POL4	P25615	582 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	RAD16	P31244	790 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	ORC2	P32833	620 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	CNS1	P33313	385 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	YKL151C	P36059	337 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	YHL041W	P38730	149 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	PEX7	P39108	375 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	LAM5	P43560	674 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	RAD17	P48581	401 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	MNP1	P53163	194 aa	Predicted RBP	4.16	□□□□□ -1.74
PEP7	YDR323C	SDA1	P53313	767 aa	Known RBP	4.16	□□□□□ -1.74
PEP7	YDR323C	SEC5	P89102	971 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	HMI1	Q12039	706 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	YLL058W	Q12198	575 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	RRP36	Q12481	300 aa	Predicted RBP	4.16	□□□□□ -1.74
PEP7	YDR323C	ENT1	Q12518	454 aa		4.16	□□□□□ -1.74
PEP7	YDR323C	CLN1	P20437	546 aa		4.15	□□□□□ -1.75
PEP7	YDR323C	SPC110	P32380	944 aa		4.15	□□□□□ -1.75
PEP7	YDR323C	UBS1	P38290	277 aa		4.15	□□□□□ -1.75
PEP7	YDR323C	HSM3	P38348	480 aa		4.15	□□□□□ -1.75
PEP7	YDR323C	ARB1	P40024	610 aa	Known RBP	4.15	□□□□□ -1.75
PEP7	YDR323C	FMP10	P40098	244 aa		4.15	□□□□□ -1.75
PEP7	YDR323C	AGX1	P43567	385 aa		4.15	□□□□□ -1.75
PEP7	YDR323C	ALG2	P43636	503 aa		4.15	□□□□□ -1.75
PEP7	YDR323C	FYV8	P46949	817 aa	Known RBP	4.15	□□□□□ -1.75
PEP7	YDR323C	CCM1	P48237	864 aa	Predicted RBP	4.15	□□□□□ -1.75
PEP7	YDR323C	YNL193W	P53870	558 aa		4.15	□□□□□ -1.75
PEP7	YDR323C	REX2	P54964	269 aa	Known RBP	4.15	□□□□□ -1.75
PEP7	YDR323C	SSY1	Q03770	852 aa		4.15	□□□□□ -1.75
PEP7	YDR323C	ETT1	Q08421	412 aa	Known RBP	4.15	□□□□□ -1.75
PEP7	YDR323C	APC2	Q12440	853 aa		4.15	□□□□□ -1.75
PEP7	YDR323C	KAR3	P17119	729 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	NTG1	P31378	399 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	DBF4	P32325	704 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	MRE11	P32829	692 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	REC104	P33323	182 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	KDX1	P36005	433 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	DHR2	P36009	735 aa	Predicted RBP	4.14	□□□□□ -1.75
PEP7	YDR323C	KTR4	P38131	464 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	YHR131C	P38835	850 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	PEX18	P38855	283 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	SPT8	P38915	602 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	TOK1	P40310	691 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	RRT14	P40470	206 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	HIS6	P40545	261 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	YJL055W	P47044	245 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	TCB2	P48231	1178 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	RNR4	P49723	345 aa	Known RBP	4.14	□□□□□ -1.75
PEP7	YDR323C	MAL11	P53048	616 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	RBG2	P53295	368 aa	Known RBP	4.14	□□□□□ -1.75
PEP7	YDR323C	MEP3	P53390	489 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	MRPL19	P53875	158 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	SNP1	Q00916	300 aa	Predicted RBP	4.14	□□□□□ -1.75
PEP7	YDR323C	TIM50	Q02776	476 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	SNZ1	Q03148	297 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	HFD1	Q04458	532 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	SMD2	Q06217	110 aa	Known RBP	4.14	□□□□□ -1.75
PEP7	YDR323C	REX3	Q12090	404 aa		4.14	□□□□□ -1.75
PEP7	YDR323C	LPX1	Q12405	387 aa	Known RBP	4.14	□□□□□ -1.75
PEP7	YDR323C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
PEP7	YDR323C	SUP35	P05453	685 aa	Known RBP	4.13	□□□□□ -1.75
PEP7	YDR323C	HOM2	P13663	365 aa	Known RBP	4.13	□□□□□ -1.75
PEP7	YDR323C	PMS1	P14242	873 aa		4.13	□□□□□ -1.75
PEP7	YDR323C	RAD53	P22216	821 aa		4.13	□□□□□ -1.75
PEP7	YDR323C	SAN1	P22470	610 aa		4.13	□□□□□ -1.75
PEP7	YDR323C	GSY1	P23337	708 aa		4.13	□□□□□ -1.75
PEP7	YDR323C	KCC4	P25389	1037 aa		4.13	□□□□□ -1.75
PEP7	YDR323C	RER1	P25560	188 aa		4.13	□□□□□ -1.75
PEP7	YDR323C	TFB1	P32776	642 aa		4.13	□□□□□ -1.75
PEP7	YDR323C	AFR1	P33304	620 aa		4.13	□□□□□ -1.75
PEP7	YDR323C	YKR078W	P36158	585 aa	Known RBP	4.13	□□□□□ -1.75
PEP7	YDR323C	FTH1	P38310	465 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms