RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W PHO87P25360 923 aa1.82□□□□□ -2.12
CFT1YDR301W CAP1P28495 268 aaKnown RBP1.82□□□□□ -2.12
CFT1YDR301W DSS4P32601 143 aa1.82□□□□□ -2.12
CFT1YDR301W PIN4P34217 668 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
CFT1YDR301W SET3P36124 751 aa1.82□□□□□ -2.12
CFT1YDR301W NOP4P37838 685 aaKnown RBP1.82□□□□□ -2.12
CFT1YDR301W PTC4P38089 393 aa1.82□□□□□ -2.12
CFT1YDR301W STS1P38637 319 aa1.82□□□□□ -2.12
CFT1YDR301W ERP2P39704 215 aa1.82□□□□□ -2.12
CFT1YDR301W PSY2P40164 858 aa1.82□□□□□ -2.12
CFT1YDR301W POL31P46957 487 aa1.82□□□□□ -2.12
CFT1YDR301W ZAP1P47043 880 aa1.82□□□□□ -2.12
CFT1YDR301W GCV2P49095 1034 aa1.82□□□□□ -2.12
CFT1YDR301W MND1P53102 219 aa1.82□□□□□ -2.12
CFT1YDR301W YNL247WP53852 767 aaKnown RBP1.82□□□□□ -2.12
CFT1YDR301W ALG11P53954 548 aaKnown RBP1.82□□□□□ -2.12
CFT1YDR301W SLT2Q00772 484 aa1.82□□□□□ -2.12
CFT1YDR301W YDR222WQ04925 415 aa1.82□□□□□ -2.12
CFT1YDR301W GPI13Q07830 1017 aa1.82□□□□□ -2.12
CFT1YDR301W RIO1Q12196 484 aaKnown RBP1.82□□□□□ -2.12
CFT1YDR301W LCB4Q12246 624 aa1.82□□□□□ -2.12
CFT1YDR301W RMP1Q12530 201 aa1.82□□□□□ -2.12
CFT1YDR301W RPS6AP0CX37 236 aaKnown RBP1.81□□□□□ -2.12
CFT1YDR301W RPS6BP0CX38 236 aaPredicted RBP1.81□□□□□ -2.12
CFT1YDR301W CHS2P14180 963 aa1.81□□□□□ -2.12
CFT1YDR301W IDI1P15496 288 aa1.81□□□□□ -2.12
CFT1YDR301W RGR1P19263 1082 aa1.81□□□□□ -2.12
CFT1YDR301W VID24P38263 362 aa1.81□□□□□ -2.12
CFT1YDR301W ERC1P38767 581 aa1.81□□□□□ -2.12
CFT1YDR301W SET5P38890 526 aaKnown RBP1.81□□□□□ -2.12
CFT1YDR301W FHL1P39521 936 aa1.81□□□□□ -2.12
CFT1YDR301W YGR111WP53265 400 aa1.81□□□□□ -2.12
CFT1YDR301W LSC1P53598 329 aaKnown RBP1.81□□□□□ -2.12
CFT1YDR301W YNL115CP53925 644 aa1.81□□□□□ -2.12
CFT1YDR301W SLG1P54867 378 aa1.81□□□□□ -2.12
CFT1YDR301W UBP3Q01477 912 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
CFT1YDR301W TIF35Q04067 274 aaKnown RBP1.81□□□□□ -2.12
CFT1YDR301W YDR344CQ05510 147 aa1.81□□□□□ -2.12
CFT1YDR301W MRX10Q05648 414 aa1.81□□□□□ -2.12
CFT1YDR301W YLR287CQ05881 355 aa1.81□□□□□ -2.12
CFT1YDR301W NOP6Q07623 225 aaKnown RBP1.81□□□□□ -2.12
CFT1YDR301W APL4Q12028 832 aa1.81□□□□□ -2.12
CFT1YDR301W BI2P03873 423 aa1.81□□□□□ -2.12
CFT1YDR301W BI4P03879 638 aa1.81□□□□□ -2.12
CFT1YDR301W TOM70P07213 617 aaKnown RBP1.81□□□□□ -2.12
CFT1YDR301W SPO12P17123 173 aa1.81□□□□□ -2.12
CFT1YDR301W SSD1P24276 1250 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
CFT1YDR301W SAT4P25333 603 aaKnown RBP1.81□□□□□ -2.12
CFT1YDR301W RSA4P25382 515 aaKnown RBP1.81□□□□□ -2.12
CFT1YDR301W CDC11P32458 415 aa1.81□□□□□ -2.12
CFT1YDR301W MNR2P35724 969 aa1.81□□□□□ -2.12
CFT1YDR301W BLI1P35727 113 aa1.81□□□□□ -2.12
CFT1YDR301W OCA5P38738 679 aa1.81□□□□□ -2.12
CFT1YDR301W IES1P43579 692 aa1.81□□□□□ -2.12
CFT1YDR301W YJR054WP47114 497 aa1.81□□□□□ -2.12
CFT1YDR301W RIM21P48565 533 aa1.81□□□□□ -2.12
CFT1YDR301W YNL134CP53912 376 aaKnown RBP1.81□□□□□ -2.12
CFT1YDR301W STP1Q00947 519 aa1.81□□□□□ -2.12
CFT1YDR301W MTG1Q03151 367 aaPredicted RBP1.81□□□□□ -2.12
CFT1YDR301W MZM1Q03429 123 aaPredicted RBP1.81□□□□□ -2.12
CFT1YDR301W STE20Q03497 939 aaKnown RBP1.81□□□□□ -2.12
CFT1YDR301W VAC14Q06708 880 aa1.81□□□□□ -2.12
CFT1YDR301W SPO75Q07798 868 aa1.81□□□□□ -2.12
CFT1YDR301W DIS3Q08162 1001 aaKnown RBP1.81□□□□□ -2.12
CFT1YDR301W TRE1Q08919 783 aa1.81□□□□□ -2.12
CFT1YDR301W CWC2Q12046 339 aaPredicted RBP1.81□□□□□ -2.12
CFT1YDR301W YOR022CQ12204 715 aa1.81□□□□□ -2.12
CFT1YDR301W APM4Q99186 491 aa1.81□□□□□ -2.12
CFT1YDR301W BI3Q9ZZW7 517 aa1.81□□□□□ -2.12
CFT1YDR301W GAL10P04397 699 aa1.81□□□□□ -2.12
CFT1YDR301W CHS1P08004 1131 aa1.81□□□□□ -2.12
CFT1YDR301W GUT2P32191 649 aa1.81□□□□□ -2.12
CFT1YDR301W SRB4P32569 687 aa1.81□□□□□ -2.12
CFT1YDR301W TGL4P36165 910 aa1.81□□□□□ -2.12
CFT1YDR301W SPC72P39723 622 aa1.81□□□□□ -2.12
CFT1YDR301W ARG2P40360 574 aa1.81□□□□□ -2.12
CFT1YDR301W MND2P40577 368 aa1.81□□□□□ -2.12
CFT1YDR301W MVP1P40959 511 aaKnown RBP1.81□□□□□ -2.12
CFT1YDR301W SGM1P47166 707 aa1.81□□□□□ -2.12
CFT1YDR301W HSH155P49955 971 aaKnown RBP1.81□□□□□ -2.12
CFT1YDR301W YGL036WP53185 909 aaPredicted RBP1.81□□□□□ -2.12
CFT1YDR301W KAP95Q06142 861 aaKnown RBP1.81□□□□□ -2.12
CFT1YDR301W ATG9Q12142 997 aa1.81□□□□□ -2.12
CFT1YDR301W YML002WP0CF17 737 aa1.81□□□□□ -2.12
CFT1YDR301W ERG11P10614 530 aa1.81□□□□□ -2.12
CFT1YDR301W PMS1P14242 873 aa1.81□□□□□ -2.12
CFT1YDR301W AEP2P22136 580 aa1.81□□□□□ -2.12
CFT1YDR301W SEC65P29478 273 aa1.81□□□□□ -2.12
CFT1YDR301W CNS1P33313 385 aa1.81□□□□□ -2.12
CFT1YDR301W ABZ1P37254 787 aaPredicted RBP1.81□□□□□ -2.12
CFT1YDR301W ASG1P40467 964 aa1.81□□□□□ -2.12
CFT1YDR301W SNZ3P43545 298 aa1.81□□□□□ -2.12
CFT1YDR301W JSN1P47135 1091 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
CFT1YDR301W ALT2P52892 507 aa1.81□□□□□ -2.12
CFT1YDR301W ALT1P52893 592 aa1.81□□□□□ -2.12
CFT1YDR301W SNZ2P53824 298 aa1.81□□□□□ -2.12
CFT1YDR301W YNL034WP53963 612 aa1.81□□□□□ -2.12
CFT1YDR301W YNL018CP53976 612 aa1.81□□□□□ -2.12
CFT1YDR301W CEG1Q01159 459 aaPredicted RBP1.81□□□□□ -2.12
CFT1YDR301W YPL014WQ02606 381 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms