RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	HRP1	Q99383	534 aa	Known RBP	2.73	□□□□□ -1.97
CSN9	YDR179C	CIT2	P08679	460 aa		2.72	□□□□□ -1.97
CSN9	YDR179C	THR1	P17423	357 aa	Known RBP	2.72	□□□□□ -1.97
CSN9	YDR179C	RNR1	P21524	888 aa	Known RBP	2.72	□□□□□ -1.97
CSN9	YDR179C	RPA135	P22138	1203 aa	Known RBP	2.72	□□□□□ -1.97
CSN9	YDR179C	MCD4	P36051	919 aa		2.72	□□□□□ -1.97
CSN9	YDR179C	HSL7	P38274	827 aa		2.72	□□□□□ -1.97
CSN9	YDR179C	UBS1	P38290	277 aa		2.72	□□□□□ -1.97
CSN9	YDR179C	PIG2	P40187	538 aa		2.72	□□□□□ -1.97
CSN9	YDR179C	GID8	P40208	455 aa		2.72	□□□□□ -1.97
CSN9	YDR179C	CAF16	P43569	289 aa		2.72	□□□□□ -1.97
CSN9	YDR179C	TY4A-J	P47023	414 aa		2.72	□□□□□ -1.97
CSN9	YDR179C	RIM13	Q03792	727 aa		2.72	□□□□□ -1.97
CSN9	YDR179C	CDC53	Q12018	815 aa	Known RBP	2.72	□□□□□ -1.97
CSN9	YDR179C	USV1	Q12132	391 aa		2.72	□□□□□ -1.97
CSN9	YDR179C	YLR149C	Q99296	730 aa		2.72	□□□□□ -1.97
CSN9	YDR179C	YKR018C	P36114	725 aa		2.71	□□□□□ -1.98
CSN9	YDR179C	ATG36	P46983	293 aa		2.71	□□□□□ -1.98
CSN9	YDR179C	PCL10	P53124	433 aa		2.71	□□□□□ -1.98
CSN9	YDR179C	NHX1	Q04121	633 aa		2.71	□□□□□ -1.98
CSN9	YDR179C	COG8	Q04632	607 aa		2.71	□□□□□ -1.98
CSN9	YDR179C	RPN7	Q06103	429 aa	Known RBP	2.71	□□□□□ -1.98
CSN9	YDR179C	MLH3	Q12083	715 aa		2.71	□□□□□ -1.98
CSN9	YDR179C	PTP1	P25044	335 aa		2.7	□□□□□ -1.98
CSN9	YDR179C	BIT2	P38346	545 aa		2.7	□□□□□ -1.98
CSN9	YDR179C	BNA3	P47039	444 aa	Known RBP	2.7	□□□□□ -1.98
CSN9	YDR179C	NNF1	P47149	201 aa		2.7	□□□□□ -1.98
CSN9	YDR179C	YGR151C	P53287	111 aa		2.7	□□□□□ -1.98
CSN9	YDR179C	SPC98	P53540	846 aa		2.7	□□□□□ -1.98
CSN9	YDR179C	NSE3	Q05541	303 aa		2.7	□□□□□ -1.98
CSN9	YDR179C	OSW1	Q08692	278 aa		2.7	□□□□□ -1.98
CSN9	YDR179C	MDM12	Q92328	271 aa		2.7	□□□□□ -1.98
CSN9	YDR179C	PGK1	P00560	416 aa	Known RBP	2.69	□□□□□ -1.98
CSN9	YDR179C	ADE5,7	P07244	802 aa	Known RBP	2.69	□□□□□ -1.98
CSN9	YDR179C	SAT4	P25333	603 aa	Known RBP	2.69	□□□□□ -1.98
CSN9	YDR179C	NTH1	P32356	751 aa		2.69	□□□□□ -1.98
CSN9	YDR179C	UGP1	P32861	499 aa	Known RBP	2.69	□□□□□ -1.98
CSN9	YDR179C	APL3	P38065	1025 aa		2.69	□□□□□ -1.98
CSN9	YDR179C	GET2	P40056	285 aa		2.69	□□□□□ -1.98
CSN9	YDR179C	NOP9	P47077	666 aa	Known RBP	2.69	□□□□□ -1.98
CSN9	YDR179C	COX18	P53239	316 aa		2.69	□□□□□ -1.98
CSN9	YDR179C	ORC1	P54784	914 aa	Predicted RBP	2.69	□□□□□ -1.98
CSN9	YDR179C	ERG6	P25087	383 aa	Known RBP	2.68	□□□□□ -1.98
CSN9	YDR179C	HOG1	P32485	435 aa		2.68	□□□□□ -1.98
CSN9	YDR179C	BCS1	P32839	456 aa		2.68	□□□□□ -1.98
CSN9	YDR179C	SET3	P36124	751 aa		2.68	□□□□□ -1.98
CSN9	YDR179C	YKR051W	P36142	418 aa		2.68	□□□□□ -1.98
CSN9	YDR179C	APN2	P38207	520 aa		2.68	□□□□□ -1.98
CSN9	YDR179C	DOT6	P40059	670 aa	Known RBP	2.68	□□□□□ -1.98
CSN9	YDR179C	RSC8	P43609	557 aa	Known RBP	2.68	□□□□□ -1.98
CSN9	YDR179C	NET1	P47035	1189 aa		2.68	□□□□□ -1.98
CSN9	YDR179C	YSH1	Q06224	779 aa	Predicted RBP	2.68	□□□□□ -1.98
CSN9	YDR179C	THI22	Q06490	572 aa		2.68	□□□□□ -1.98
CSN9	YDR179C	YDL086W	Q07505	273 aa		2.68	□□□□□ -1.98
CSN9	YDR179C	CHS5	Q12114	671 aa	Known RBP	2.68	□□□□□ -1.98
CSN9	YDR179C	Q0142	Q9ZZW4	58 aa		2.68	□□□□□ -1.98
CSN9	YDR179C	CDC9	P04819	755 aa		2.67	□□□□□ -1.98
CSN9	YDR179C	ERG11	P10614	530 aa		2.67	□□□□□ -1.98
CSN9	YDR179C	SEC15	P22224	910 aa		2.67	□□□□□ -1.98
CSN9	YDR179C	YEL1	P34225	687 aa		2.67	□□□□□ -1.98
CSN9	YDR179C	YMC2	P38087	329 aa		2.67	□□□□□ -1.98
CSN9	YDR179C	CTP1	P38152	299 aa		2.67	□□□□□ -1.98
CSN9	YDR179C	GAT1	P43574	510 aa		2.67	□□□□□ -1.98
CSN9	YDR179C	SET2	P46995	733 aa	Known RBP	2.67	□□□□□ -1.98
CSN9	YDR179C	FMP30	Q02883	468 aa		2.67	□□□□□ -1.98
CSN9	YDR179C	ERG20	P08524	352 aa	Known RBP	2.66	□□□□□ -1.98
CSN9	YDR179C	RAD18	P10862	487 aa		2.66	□□□□□ -1.98
CSN9	YDR179C	STE12	P13574	688 aa		2.66	□□□□□ -1.98
CSN9	YDR179C	SEC6	P32844	805 aa		2.66	□□□□□ -1.98
CSN9	YDR179C	KSP1	P38691	1029 aa	Known RBP	2.66	□□□□□ -1.98
CSN9	YDR179C	PMC1	P38929	1173 aa	Predicted RBP	2.66	□□□□□ -1.98
CSN9	YDR179C	MAL11	P53048	616 aa		2.66	□□□□□ -1.98
CSN9	YDR179C	GPD1	Q00055	391 aa	Known RBP	2.66	□□□□□ -1.98
CSN9	YDR179C	NGL2	Q03264	515 aa	Known RBP	2.66	□□□□□ -1.98
CSN9	YDR179C	MDM20	Q12387	796 aa	Known RBP	2.66	□□□□□ -1.98
CSN9	YDR179C	ECM3	Q99252	613 aa		2.66	□□□□□ -1.98
CSN9	YDR179C	SRD1	P09007	221 aa		2.65	□□□□□ -1.99
CSN9	YDR179C	KIN82	P25341	720 aa		2.65	□□□□□ -1.99
CSN9	YDR179C	VBA3	P25594	458 aa		2.65	□□□□□ -1.99
CSN9	YDR179C	FEN2	P25621	512 aa	Known RBP	2.65	□□□□□ -1.99
CSN9	YDR179C	SSZ1	P38788	538 aa	Known RBP	2.65	□□□□□ -1.99
CSN9	YDR179C	DSS1	P39112	969 aa		2.65	□□□□□ -1.99
CSN9	YDR179C	XBP1	P40489	647 aa		2.65	□□□□□ -1.99
CSN9	YDR179C	PMT6	P42934	759 aa		2.65	□□□□□ -1.99
CSN9	YDR179C	MPS3	P47069	682 aa		2.65	□□□□□ -1.99
CSN9	YDR179C	DAK1	P54838	584 aa	Known RBP	2.65	□□□□□ -1.99
CSN9	YDR179C	UGO1	Q03327	502 aa		2.65	□□□□□ -1.99
CSN9	YDR179C	RPN4	Q03465	531 aa		2.65	□□□□□ -1.99
CSN9	YDR179C	IRC3	Q06683	689 aa		2.65	□□□□□ -1.99
CSN9	YDR179C	ULA1	Q12059	462 aa		2.65	□□□□□ -1.99
CSN9	YDR179C	YLR125W	Q12138	136 aa		2.65	□□□□□ -1.99
CSN9	YDR179C	POM34	Q12445	299 aa		2.65	□□□□□ -1.99
CSN9	YDR179C	YOL098C	Q12496	1037 aa		2.65	□□□□□ -1.99
CSN9	YDR179C	PHO5	P00635	467 aa		2.64	□□□□□ -1.99
CSN9	YDR179C	TPK2	P06245	380 aa		2.64	□□□□□ -1.99
CSN9	YDR179C	SRP40	P32583	406 aa	Predicted RBP	2.64	□□□□□ -1.99
CSN9	YDR179C	KHA1	P40309	873 aa		2.64	□□□□□ -1.99
CSN9	YDR179C	THI6	P41835	540 aa		2.64	□□□□□ -1.99
CSN9	YDR179C	UFO1	Q04511	668 aa		2.64	□□□□□ -1.99
CSN9	YDR179C	RGC1	Q06108	1083 aa	Known RBP	2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms