RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W ABD1P32783 436 aaPredicted RBP12.98□□□□□ -0.33
PTP1YDL230W APM2P38700 605 aa12.98□□□□□ -0.33
PTP1YDL230W PMC1P38929 1173 aaPredicted RBP12.98□□□□□ -0.33
PTP1YDL230W SAH1P39954 449 aaKnown RBP12.98□□□□□ -0.33
PTP1YDL230W MKT1P40850 830 aaKnown RBP12.98□□□□□ -0.33
PTP1YDL230W IVY1Q04934 453 aa12.98□□□□□ -0.33
PTP1YDL230W TY3A-GQ12173 290 aa12.98□□□□□ -0.33
PTP1YDL230W TY3A-IQ99219 290 aa12.98□□□□□ -0.33
PTP1YDL230W GCR1P07261 785 aa12.97□□□□□ -0.33
PTP1YDL230W POX1P13711 748 aa12.97□□□□□ -0.33
PTP1YDL230W PMS1P14242 873 aa12.97□□□□□ -0.33
PTP1YDL230W AEP2P22136 580 aa12.97□□□□□ -0.33
PTP1YDL230W YME1P32795 747 aa12.97□□□□□ -0.33
PTP1YDL230W RGT1P32862 1170 aa12.97□□□□□ -0.33
PTP1YDL230W CCL1P37366 393 aa12.97□□□□□ -0.33
PTP1YDL230W QNS1P38795 714 aaKnown RBP12.97□□□□□ -0.33
PTP1YDL230W ULI1P43604 169 aa12.97□□□□□ -0.33
PTP1YDL230W JJJ3P47138 172 aa12.97□□□□□ -0.33
PTP1YDL230W RSM26P47141 266 aa12.97□□□□□ -0.33
PTP1YDL230W YML6P51998 286 aa12.97□□□□□ -0.33
PTP1YDL230W RPL22BP56628 122 aaKnown RBP12.97□□□□□ -0.33
PTP1YDL230W HFI1Q12060 488 aa12.97□□□□□ -0.33
PTP1YDL230W COX4P04037 155 aa12.96□□□□□ -0.33
PTP1YDL230W GAL10P04397 699 aa12.96□□□□□ -0.33
PTP1YDL230W RPB2P08518 1224 aaKnown RBP12.96□□□□□ -0.33
PTP1YDL230W SSA4P22202 642 aaKnown RBP12.96□□□□□ -0.33
PTP1YDL230W YCR051WP25631 222 aa12.96□□□□□ -0.33
PTP1YDL230W PTC3P34221 468 aaKnown RBP12.96□□□□□ -0.33
PTP1YDL230W PEX21P50091 288 aa12.96□□□□□ -0.33
PTP1YDL230W ERV41Q04651 352 aa12.96□□□□□ -0.33
PTP1YDL230W YLR455WQ06188 304 aa12.96□□□□□ -0.33
PTP1YDL230W YPL225WQ08971 146 aaKnown RBP12.96□□□□□ -0.33
PTP1YDL230W SGT2Q12118 346 aaKnown RBP12.96□□□□□ -0.33
PTP1YDL230W YML002WP0CF17 737 aa12.95□□□□□ -0.34
PTP1YDL230W WHI2P12611 486 aa12.95□□□□□ -0.34
PTP1YDL230W SKG6P32900 734 aaPredicted RBP12.95□□□□□ -0.34
PTP1YDL230W RPC37P36121 282 aa12.95□□□□□ -0.34
PTP1YDL230W BSD2P38356 321 aa12.95□□□□□ -0.34
PTP1YDL230W KHA1P40309 873 aa12.95□□□□□ -0.34
PTP1YDL230W DSN1P40568 576 aa12.95□□□□□ -0.34
PTP1YDL230W SPR3P41901 512 aa12.95□□□□□ -0.34
PTP1YDL230W YGL036WP53185 909 aaPredicted RBP12.95□□□□□ -0.34
PTP1YDL230W YGR130CP53278 816 aa12.95□□□□□ -0.34
PTP1YDL230W TAF9Q05027 157 aa12.95□□□□□ -0.34
PTP1YDL230W TUB3P09734 445 aaKnown RBP12.94□□□□□ -0.34
PTP1YDL230W TRX1P22217 103 aaKnown RBP12.94□□□□□ -0.34
PTP1YDL230W POP4P38336 279 aa12.94□□□□□ -0.34
PTP1YDL230W ASG7P46993 209 aa12.94□□□□□ -0.34
PTP1YDL230W ALY2P47029 1046 aa12.94□□□□□ -0.34
PTP1YDL230W ZIP2P53061 704 aa12.94□□□□□ -0.34
PTP1YDL230W VPS72Q03388 795 aa12.94□□□□□ -0.34
PTP1YDL230W RRD2Q12461 358 aa12.94□□□□□ -0.34
PTP1YDL230W CMD1P06787 147 aaKnown RBP12.93□□□□□ -0.34
PTP1YDL230W TPS2P31688 896 aaKnown RBP12.93□□□□□ -0.34
PTP1YDL230W EFB1P32471 206 aaKnown RBP12.93□□□□□ -0.34
PTP1YDL230W TRM2P33753 639 aa12.93□□□□□ -0.34
PTP1YDL230W APE3P37302 537 aaKnown RBP12.93□□□□□ -0.34
PTP1YDL230W PCA1P38360 1216 aa12.93□□□□□ -0.34
PTP1YDL230W ALT1P52893 592 aa12.93□□□□□ -0.34
PTP1YDL230W YDR018CQ12185 396 aa12.93□□□□□ -0.34
PTP1YDL230W NCA2Q12374 616 aa12.93□□□□□ -0.34
PTP1YDL230W EMP46Q12396 444 aa12.93□□□□□ -0.34
PTP1YDL230W JIP3O13555 125 aa12.92□□□□□ -0.34
PTP1YDL230W HEM15P16622 393 aa12.92□□□□□ -0.34
PTP1YDL230W SRV2P17555 526 aaKnown RBP12.92□□□□□ -0.34
PTP1YDL230W MGT1P26188 188 aa12.92□□□□□ -0.34
PTP1YDL230W DUG2P38149 878 aa12.92□□□□□ -0.34
PTP1YDL230W MRX1P40050 688 aa12.92□□□□□ -0.34
PTP1YDL230W SNZ3P43545 298 aa12.92□□□□□ -0.34
PTP1YDL230W SNZ2P53824 298 aa12.92□□□□□ -0.34
PTP1YDL230W SHR3Q02774 210 aa12.92□□□□□ -0.34
PTP1YDL230W SNU56Q03782 492 aaKnown RBP12.92□□□□□ -0.34
PTP1YDL230W CDD1Q06549 142 aa12.92□□□□□ -0.34
PTP1YDL230W ATG11Q12527 1178 aa12.92□□□□□ -0.34
PTP1YDL230W ADE4P04046 510 aaKnown RBP12.91□□□□□ -0.34
PTP1YDL230W MRP4P32902 394 aa12.91□□□□□ -0.34
PTP1YDL230W PAM1P37304 830 aaKnown RBP12.91□□□□□ -0.34
PTP1YDL230W YBR062CP38239 180 aa12.91□□□□□ -0.34
PTP1YDL230W YSW1P38280 609 aa12.91□□□□□ -0.34
PTP1YDL230W YBP1P38315 674 aa12.91□□□□□ -0.34
PTP1YDL230W ECM1P39715 212 aa12.91□□□□□ -0.34
PTP1YDL230W YJL045WP47052 634 aa12.91□□□□□ -0.34
PTP1YDL230W HOP2P53187 214 aa12.91□□□□□ -0.34
PTP1YDL230W MSC2Q03455 724 aa12.91□□□□□ -0.34
PTP1YDL230W FAR8Q05040 523 aa12.91□□□□□ -0.34
PTP1YDL230W CST9Q06032 482 aa12.91□□□□□ -0.34
PTP1YDL230W MET7Q08645 548 aa12.91□□□□□ -0.34
PTP1YDL230W PRP16P15938 1071 aaPredicted RBP12.9□□□□□ -0.34
PTP1YDL230W CDC10P25342 322 aaKnown RBP12.9□□□□□ -0.34
PTP1YDL230W MND1P53102 219 aa12.9□□□□□ -0.34
PTP1YDL230W COG6P53959 839 aa12.9□□□□□ -0.34
PTP1YDL230W ELP3Q02908 557 aaKnown RBP12.9□□□□□ -0.34
PTP1YDL230W CWC21Q03375 135 aaKnown RBP12.9□□□□□ -0.34
PTP1YDL230W ILV2P07342 687 aaKnown RBP12.89□□□□□ -0.35
PTP1YDL230W CDC24P11433 854 aaPredicted RBP12.89□□□□□ -0.35
PTP1YDL230W TIM23P32897 222 aa12.89□□□□□ -0.35
PTP1YDL230W LOS1P33418 1100 aaPredicted RBP12.89□□□□□ -0.35
PTP1YDL230W YBL036CP38197 257 aa12.89□□□□□ -0.35
PTP1YDL230W PCM1P38628 557 aaKnown RBP12.89□□□□□ -0.35
PTP1YDL230W SAW1P39735 261 aa12.89□□□□□ -0.35
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms