RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W MMM1P41800 426 aa6.88□□□□□ -1.31
LDB16YCL005W RPS7BP48164 190 aaKnown RBP6.88□□□□□ -1.31
LDB16YCL005W PSP2P50109 593 aaKnown RBP6.88□□□□□ -1.31
LDB16YCL005W SUT1P53032 299 aaKnown RBP6.88□□□□□ -1.31
LDB16YCL005W BOP3P53958 396 aa6.88□□□□□ -1.31
LDB16YCL005W VTC3Q02725 835 aa6.88□□□□□ -1.31
LDB16YCL005W OPT2Q06593 877 aa6.88□□□□□ -1.31
LDB16YCL005W IES4Q08561 116 aa6.88□□□□□ -1.31
LDB16YCL005W MET7Q08645 548 aa6.88□□□□□ -1.31
LDB16YCL005W CDC53Q12018 815 aaKnown RBP6.88□□□□□ -1.31
LDB16YCL005W TY1A-DR3Q12441 440 aa6.88□□□□□ -1.31
LDB16YCL005W YUR1P26725 428 aa6.87□□□□□ -1.31
LDB16YCL005W EFT1P32324 842 aaKnown RBP6.87□□□□□ -1.31
LDB16YCL005W HXT1P32465 570 aa6.87□□□□□ -1.31
LDB16YCL005W PIN4P34217 668 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
LDB16YCL005W MOT2P34909 587 aaKnown RBP6.87□□□□□ -1.31
LDB16YCL005W NPP2P39997 493 aa6.87□□□□□ -1.31
LDB16YCL005W FIR1P40020 876 aa6.87□□□□□ -1.31
LDB16YCL005W QDR2P40474 542 aa6.87□□□□□ -1.31
LDB16YCL005W TAD1P53065 400 aa6.87□□□□□ -1.31
LDB16YCL005W SHE10P53075 577 aa6.87□□□□□ -1.31
LDB16YCL005W MAL13P53338 473 aa6.87□□□□□ -1.31
LDB16YCL005W ESBP6P53918 673 aa6.87□□□□□ -1.31
LDB16YCL005W SOV1Q04748 898 aa6.87□□□□□ -1.31
LDB16YCL005W YDR461C-AQ2V2P7 80 aa6.87□□□□□ -1.31
LDB16YCL005W NOP14Q99207 810 aaKnown RBP6.87□□□□□ -1.31
LDB16YCL005W RPP1AP05318 106 aaPredicted RBP6.86□□□□□ -1.31
LDB16YCL005W LEU1P07264 779 aaKnown RBP6.86□□□□□ -1.31
LDB16YCL005W PRE10P21242 288 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
LDB16YCL005W RPB10P22139 70 aa6.86□□□□□ -1.31
LDB16YCL005W KIP1P28742 1111 aa6.86□□□□□ -1.31
LDB16YCL005W BUD16P39988 312 aa6.86□□□□□ -1.31
LDB16YCL005W TCB2P48231 1178 aa6.86□□□□□ -1.31
LDB16YCL005W HSH155P49955 971 aaKnown RBP6.86□□□□□ -1.31
LDB16YCL005W MTO1P53070 669 aa6.86□□□□□ -1.31
LDB16YCL005W CUL3P53202 744 aa6.86□□□□□ -1.31
LDB16YCL005W YGR021WP53212 290 aa6.86□□□□□ -1.31
LDB16YCL005W YNL146WP53906 100 aa6.86□□□□□ -1.31
LDB16YCL005W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
LDB16YCL005W UTP14Q04500 899 aaKnown RBP6.86□□□□□ -1.31
LDB16YCL005W YLR225CQ05948 407 aaKnown RBP6.86□□□□□ -1.31
LDB16YCL005W YLR001CQ07895 862 aa6.86□□□□□ -1.31
LDB16YCL005W HIF1Q12373 385 aa6.86□□□□□ -1.31
LDB16YCL005W FRT1Q99332 602 aa6.86□□□□□ -1.31
LDB16YCL005W TRP2P00899 507 aaKnown RBP6.85□□□□□ -1.31
LDB16YCL005W POX1P13711 748 aa6.85□□□□□ -1.31
LDB16YCL005W DPH2P32461 534 aa6.85□□□□□ -1.31
LDB16YCL005W RRP1P35178 278 aaPredicted RBP6.85□□□□□ -1.31
LDB16YCL005W BYE1P36106 594 aa6.85□□□□□ -1.31
LDB16YCL005W OSH7P38755 437 aa6.85□□□□□ -1.31
LDB16YCL005W SET5P38890 526 aaKnown RBP6.85□□□□□ -1.31
LDB16YCL005W ACO2P39533 789 aa6.85□□□□□ -1.31
LDB16YCL005W SCD6P45978 349 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
LDB16YCL005W SGM1P47166 707 aa6.85□□□□□ -1.31
LDB16YCL005W PRP31P49704 494 aaPredicted RBP6.85□□□□□ -1.31
LDB16YCL005W SCW11P53189 542 aa6.85□□□□□ -1.31
LDB16YCL005W ENV11P53246 860 aa6.85□□□□□ -1.31
LDB16YCL005W CAF120P53836 1060 aa6.85□□□□□ -1.31
LDB16YCL005W NGL3Q03210 505 aa6.85□□□□□ -1.31
LDB16YCL005W HFI1Q12060 488 aa6.85□□□□□ -1.31
LDB16YCL005W SLX4Q12098 748 aa6.85□□□□□ -1.31
LDB16YCL005W TIF6Q12522 245 aaKnown RBP6.85□□□□□ -1.31
LDB16YCL005W SNF1P06782 633 aaKnown RBP6.84□□□□□ -1.31
LDB16YCL005W CDC33P07260 213 aaKnown RBP6.84□□□□□ -1.31
LDB16YCL005W MAS2P11914 482 aa6.84□□□□□ -1.31
LDB16YCL005W KIN82P25341 720 aa6.84□□□□□ -1.31
LDB16YCL005W GPT2P36148 743 aa6.84□□□□□ -1.31
LDB16YCL005W SMF1P38925 575 aa6.84□□□□□ -1.31
LDB16YCL005W JJJ3P47138 172 aa6.84□□□□□ -1.31
LDB16YCL005W ORC5P50874 479 aa6.84□□□□□ -1.31
LDB16YCL005W JJJ1P53863 590 aa6.84□□□□□ -1.31
LDB16YCL005W RPA49Q01080 415 aaPredicted RBP6.84□□□□□ -1.31
LDB16YCL005W YMR114CQ04471 368 aaKnown RBP6.84□□□□□ -1.31
LDB16YCL005W ECM7Q06200 448 aa6.84□□□□□ -1.31
LDB16YCL005W OSH2Q12451 1283 aa6.84□□□□□ -1.31
LDB16YCL005W NAT1P12945 854 aaKnown RBP6.83□□□□□ -1.32
LDB16YCL005W SEC21P32074 935 aaKnown RBP6.83□□□□□ -1.32
LDB16YCL005W SWI3P32591 825 aa6.83□□□□□ -1.32
LDB16YCL005W SMY2P32909 740 aaKnown RBP6.83□□□□□ -1.32
LDB16YCL005W LTV1P34078 463 aa6.83□□□□□ -1.32
LDB16YCL005W FLR1P38124 548 aa6.83□□□□□ -1.32
LDB16YCL005W ETP1P38748 585 aaKnown RBP6.83□□□□□ -1.32
LDB16YCL005W CCT4P39078 528 aaKnown RBP6.83□□□□□ -1.32
LDB16YCL005W FTR1P40088 404 aa6.83□□□□□ -1.32
LDB16YCL005W PSY2P40164 858 aa6.83□□□□□ -1.32
LDB16YCL005W MAD1P40957 749 aa6.83□□□□□ -1.32
LDB16YCL005W ASN1P49089 572 aaKnown RBP6.83□□□□□ -1.32
LDB16YCL005W SCS3P53012 380 aa6.83□□□□□ -1.32
LDB16YCL005W KAP114P53067 1004 aa6.83□□□□□ -1.32
LDB16YCL005W BTN2P53286 410 aa6.83□□□□□ -1.32
LDB16YCL005W YNL011CP53980 444 aa6.83□□□□□ -1.32
LDB16YCL005W CEF1Q03654 590 aaPredicted RBP6.83□□□□□ -1.32
LDB16YCL005W RRB1Q04225 511 aaKnown RBP6.83□□□□□ -1.32
LDB16YCL005W YMR018WQ04364 514 aa6.83□□□□□ -1.32
LDB16YCL005W IWR1Q07532 353 aaPredicted RBP6.83□□□□□ -1.32
LDB16YCL005W SIL1Q08199 421 aa6.83□□□□□ -1.32
LDB16YCL005W MOT1P32333 1867 aa6.83□□□□□ -1.32
LDB16YCL005W GFA1P14742 717 aaKnown RBP6.82□□□□□ -1.32
LDB16YCL005W MSN1P22148 382 aa6.82□□□□□ -1.32
LDB16YCL005W CBF2P32504 956 aa6.82□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms