RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	LCB2	P40970	561 aa		4.9	□□□□□ -1.62
SAF1	YBR280C	MTD1	Q02046	320 aa	Known RBP	4.9	□□□□□ -1.62
SAF1	YBR280C	TBF1	Q02457	562 aa		4.9	□□□□□ -1.62
SAF1	YBR280C	CEF1	Q03654	590 aa	Predicted RBP	4.9	□□□□□ -1.62
SAF1	YBR280C	DON1	Q05610	365 aa		4.9	□□□□□ -1.62
SAF1	YBR280C	YCG1	Q06680	1035 aa		4.9	□□□□□ -1.62
SAF1	YBR280C	MLH2	Q07980	695 aa		4.9	□□□□□ -1.62
SAF1	YBR280C	YDL206W	Q12424	762 aa		4.9	□□□□□ -1.62
SAF1	YBR280C	FPR1	P20081	114 aa	Known RBP	4.89	□□□□□ -1.63
SAF1	YBR280C	IME1	P21190	360 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	YBR225W	P38321	900 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	GEM1	P39722	662 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	ERG10	P41338	398 aa	Known RBP	4.89	□□□□□ -1.63
SAF1	YBR280C	NPA3	P47122	385 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	YNR065C	P53751	1116 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	KRE33	P53914	1056 aa	Known RBP	4.89	□□□□□ -1.63
SAF1	YBR280C	TOF2	Q02208	771 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	ECM22	Q05958	814 aa	Predicted RBP	4.89	□□□□□ -1.63
SAF1	YBR280C	GAL10	P04397	699 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	HSF1	P10961	833 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	REV1	P12689	985 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	CHS2	P14180	963 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	GUT1	P32190	709 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	EFB1	P32471	206 aa	Known RBP	4.89	□□□□□ -1.63
SAF1	YBR280C	ATG12	P38316	186 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	RAD55	P38953	406 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	GDH3	P39708	457 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	YIR007W	P40566	764 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	YJR054W	P47114	497 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	TIM8	P57744	87 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	SMA1	Q02651	245 aa		4.89	□□□□□ -1.63
SAF1	YBR280C	ABP140	Q08641	628 aa	Known RBP	4.89	□□□□□ -1.63
SAF1	YBR280C	RRT12	P25381	491 aa		4.88	□□□□□ -1.63
SAF1	YBR280C	CDC15	P27636	974 aa		4.88	□□□□□ -1.63
SAF1	YBR280C	SWI3	P32591	825 aa		4.88	□□□□□ -1.63
SAF1	YBR280C	SAH1	P39954	449 aa	Known RBP	4.88	□□□□□ -1.63
SAF1	YBR280C	OSW5	P40219	148 aa		4.88	□□□□□ -1.63
SAF1	YBR280C	GUF1	P46943	645 aa		4.88	□□□□□ -1.63
SAF1	YBR280C	HPF1	Q05164	967 aa		4.88	□□□□□ -1.63
SAF1	YBR280C	YDL129W	Q07555	291 aa		4.88	□□□□□ -1.63
SAF1	YBR280C	TCO89	Q08921	799 aa		4.88	□□□□□ -1.63
SAF1	YBR280C	YPL216W	Q08964	1102 aa		4.88	□□□□□ -1.63
SAF1	YBR280C	MED1	Q12321	566 aa		4.88	□□□□□ -1.63
SAF1	YBR280C	LPX1	Q12405	387 aa	Known RBP	4.88	□□□□□ -1.63
SAF1	YBR280C	RNR1	P21524	888 aa	Known RBP	4.87	□□□□□ -1.63
SAF1	YBR280C	HIR1	P32479	840 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	CBF2	P32504	956 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	DSS4	P32601	143 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	XRS2	P33301	854 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	PRX1	P34227	261 aa	Known RBP	4.87	□□□□□ -1.63
SAF1	YBR280C	FHL1	P39521	936 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	DSE1	P40077	573 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	MZM1	Q03429	123 aa	Predicted RBP	4.87	□□□□□ -1.63
SAF1	YBR280C	RGA2	Q06407	1009 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	TLG2	Q08144	397 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	SLX4	Q12098	748 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	GIS3	Q12418	502 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	BI4	P03879	638 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	MSF1	P08425	469 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	RGR1	P19263	1082 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	SCJ1	P25303	377 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	LRE1	P25579	583 aa	Known RBP	4.87	□□□□□ -1.63
SAF1	YBR280C	RDS1	P25611	832 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	BMH1	P29311	267 aa	Known RBP	4.87	□□□□□ -1.63
SAF1	YBR280C	TFB1	P32776	642 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	RIM101	P33400	625 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	PIK1	P39104	1066 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	HEL2	Q05580	639 aa	Known RBP	4.87	□□□□□ -1.63
SAF1	YBR280C	IWR1	Q07532	353 aa	Predicted RBP	4.87	□□□□□ -1.63
SAF1	YBR280C	RLP24	Q07915	199 aa	Known RBP	4.87	□□□□□ -1.63
SAF1	YBR280C	DDC1	Q08949	612 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	NBP2	Q12163	236 aa		4.87	□□□□□ -1.63
SAF1	YBR280C	SAP190	P36123	1033 aa		4.86	□□□□□ -1.63
SAF1	YBR280C	UTH1	P36135	365 aa		4.86	□□□□□ -1.63
SAF1	YBR280C	HEM14	P40012	539 aa		4.86	□□□□□ -1.63
SAF1	YBR280C	CDC1	P40986	491 aa		4.86	□□□□□ -1.63
SAF1	YBR280C	TOS3	P43637	560 aa		4.86	□□□□□ -1.63
SAF1	YBR280C	PEX14	P53112	341 aa		4.86	□□□□□ -1.63
SAF1	YBR280C	YAT1	P80235	687 aa		4.86	□□□□□ -1.63
SAF1	YBR280C	RPA49	Q01080	415 aa	Predicted RBP	4.86	□□□□□ -1.63
SAF1	YBR280C	VPS20	Q04272	221 aa		4.86	□□□□□ -1.63
SAF1	YBR280C	YOR387C	Q08910	206 aa		4.86	□□□□□ -1.63
SAF1	YBR280C	SAT4	P25333	603 aa	Known RBP	4.85	□□□□□ -1.63
SAF1	YBR280C	VBA3	P25594	458 aa		4.85	□□□□□ -1.63
SAF1	YBR280C	PDR3	P33200	976 aa		4.85	□□□□□ -1.63
SAF1	YBR280C	VBA5	P36172	582 aa		4.85	□□□□□ -1.63
SAF1	YBR280C	STS1	P38637	319 aa		4.85	□□□□□ -1.63
SAF1	YBR280C	OCA5	P38738	679 aa		4.85	□□□□□ -1.63
SAF1	YBR280C	UFE1	P41834	346 aa		4.85	□□□□□ -1.63
SAF1	YBR280C	COQ6	P53318	479 aa		4.85	□□□□□ -1.63
SAF1	YBR280C	YPL014W	Q02606	381 aa		4.85	□□□□□ -1.63
SAF1	YBR280C	COX11	P19516	300 aa	Known RBP	4.85	□□□□□ -1.63
SAF1	YBR280C	YKL091C	P33324	310 aa	Known RBP	4.85	□□□□□ -1.63
SAF1	YBR280C	SRX1	P36077	127 aa		4.85	□□□□□ -1.63
SAF1	YBR280C	YKL023W	P36103	277 aa	Known RBP	4.85	□□□□□ -1.63
SAF1	YBR280C	RSM25	P40496	264 aa		4.85	□□□□□ -1.63
SAF1	YBR280C	SDS3	P40505	327 aa		4.85	□□□□□ -1.63
SAF1	YBR280C	SBE2	P42223	864 aa	Known RBP	4.85	□□□□□ -1.63
SAF1	YBR280C	VEL1	P53058	206 aa		4.85	□□□□□ -1.63
SAF1	YBR280C	TDA7	P53882	636 aa	Predicted RBP	4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 138.5 ms