RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	HXT13	P39924	564 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	GPD2	P41911	440 aa	Known RBP	4.05	□□□□□ -1.76
YAL004W	YAL004W	ERR3	P42222	437 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	GZF3	P42944	551 aa	Known RBP	4.05	□□□□□ -1.76
YAL004W	YAL004W	UBP6	P43593	499 aa	Known RBP	4.05	□□□□□ -1.76
YAL004W	YAL004W	ENT3	P47160	408 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	YGL140C	P53120	1219 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	HXT17	P53631	564 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	HXT15	P54854	567 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	PEX13	P80667	386 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	MEC3	Q02574	474 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	TRS130	Q03660	1102 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	MSH6	Q03834	1242 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	DOT1	Q04089	582 aa	Known RBP	4.05	□□□□□ -1.76
YAL004W	YAL004W	PMT7	Q06644	662 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	SCM3	Q12334	223 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	ENT1	Q12518	454 aa		4.05	□□□□□ -1.76
YAL004W	YAL004W	CDC9	P04819	755 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
YAL004W	YAL004W	MSS18	P08593	268 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	ACE2	P21192	770 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	ADP1	P25371	1049 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	FUN30	P31380	1131 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	PYC2	P32327	1180 aa	Known RBP	4.04	□□□□□ -1.76
YAL004W	YAL004W	HBS1	P32769	611 aa	Known RBP	4.04	□□□□□ -1.76
YAL004W	YAL004W	SPC29	P33419	253 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	AIM3	P38266	947 aa	Known RBP	4.04	□□□□□ -1.76
YAL004W	YAL004W	BIT2	P38346	545 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	SRP72	P38688	640 aa	Known RBP	4.04	□□□□□ -1.76
YAL004W	YAL004W	EMP65	P40085	556 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	QRI7	P43122	407 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	ALG2	P43636	503 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	YGL176C	P46945	554 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	CTR9	P89105	1077 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	RAT1	Q02792	1006 aa	Known RBP	4.04	□□□□□ -1.76
YAL004W	YAL004W	EAR1	Q03212	550 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	NSE5	Q03718	556 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	CSI1	Q04368	295 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	GUD1	Q07729	489 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	ISA1	Q07821	250 aa	Predicted RBP	4.04	□□□□□ -1.76
YAL004W	YAL004W	YDL177C	Q12257	170 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	HSH49	Q99181	213 aa	Predicted RBP	4.04	□□□□□ -1.76
YAL004W	YAL004W	TAD3	Q9URQ3	322 aa		4.04	□□□□□ -1.76
YAL004W	YAL004W	RAD50	P12753	1312 aa		4.03	□□□□□ -1.76
YAL004W	YAL004W	COB	P00163	385 aa		4.03	□□□□□ -1.76
YAL004W	YAL004W	CDC16	P09798	840 aa		4.03	□□□□□ -1.76
YAL004W	YAL004W	MSD1	P15179	658 aa	Known RBP	4.03	□□□□□ -1.76
YAL004W	YAL004W	OSM1	P21375	501 aa	Known RBP	4.03	□□□□□ -1.76
YAL004W	YAL004W	RET1	P22276	1149 aa	Known RBP	4.03	□□□□□ -1.76
YAL004W	YAL004W	SAN1	P22470	610 aa		4.03	□□□□□ -1.76
YAL004W	YAL004W	UBS1	P38290	277 aa		4.03	□□□□□ -1.76
YAL004W	YAL004W	YNG2	P38806	282 aa	Known RBP	4.03	□□□□□ -1.76
YAL004W	YAL004W	POP2	P39008	433 aa		4.03	□□□□□ -1.76
YAL004W	YAL004W	RET2	P43621	546 aa		4.03	□□□□□ -1.76
YAL004W	YAL004W	MNN11	P46985	422 aa	Known RBP	4.03	□□□□□ -1.76
YAL004W	YAL004W	ALT1	P52893	592 aa		4.03	□□□□□ -1.76
YAL004W	YAL004W	SLD3	P53135	668 aa		4.03	□□□□□ -1.76
YAL004W	YAL004W	TIM50	Q02776	476 aa		4.03	□□□□□ -1.76
YAL004W	YAL004W	SSY1	Q03770	852 aa		4.03	□□□□□ -1.76
YAL004W	YAL004W	TIF35	Q04067	274 aa	Known RBP	4.03	□□□□□ -1.76
YAL004W	YAL004W	YDR341C	Q05506	607 aa	Known RBP	4.03	□□□□□ -1.76
YAL004W	YAL004W	YLR287C	Q05881	355 aa		4.03	□□□□□ -1.76
YAL004W	YAL004W	BLS1	Q06071	122 aa		4.03	□□□□□ -1.76
YAL004W	YAL004W	RRP9	Q06506	573 aa	Known RBP	4.03	□□□□□ -1.76
YAL004W	YAL004W	RSC58	Q07979	502 aa		4.03	□□□□□ -1.76
YAL004W	YAL004W	RRG1	Q12167	365 aa	Predicted RBP	4.03	□□□□□ -1.76
YAL004W	YAL004W	SES1	P07284	462 aa	Known RBP	4.02	□□□□□ -1.77
YAL004W	YAL004W	RPS4A	P0CX35	261 aa	Known RBP	4.02	□□□□□ -1.77
YAL004W	YAL004W	RPS4B	P0CX36	261 aa	Known RBP	4.02	□□□□□ -1.77
YAL004W	YAL004W	YER152C	P10356	443 aa		4.02	□□□□□ -1.77
YAL004W	YAL004W	COX11	P19516	300 aa	Known RBP	4.02	□□□□□ -1.77
YAL004W	YAL004W	RAD16	P31244	790 aa		4.02	□□□□□ -1.77
YAL004W	YAL004W	HEM12	P32347	362 aa	Predicted RBP	4.02	□□□□□ -1.77
YAL004W	YAL004W	AAR2	P32357	355 aa	Predicted RBP	4.02	□□□□□ -1.77
YAL004W	YAL004W	DAL3	P32459	195 aa		4.02	□□□□□ -1.77
YAL004W	YAL004W	PET309	P32522	965 aa	Predicted RBP	4.02	□□□□□ -1.77
YAL004W	YAL004W	PET10	P36139	283 aa		4.02	□□□□□ -1.77
YAL004W	YAL004W	CCT3	P39077	534 aa	Known RBP	4.02	□□□□□ -1.77
YAL004W	YAL004W	MXR1	P40029	184 aa		4.02	□□□□□ -1.77
YAL004W	YAL004W	RAD26	P40352	1085 aa		4.02	□□□□□ -1.77
YAL004W	YAL004W	GCV1	P48015	400 aa		4.02	□□□□□ -1.77
YAL004W	YAL004W	RIM8	P53179	542 aa		4.02	□□□□□ -1.77
YAL004W	YAL004W	RBG2	P53295	368 aa	Known RBP	4.02	□□□□□ -1.77
YAL004W	YAL004W	ROD1	Q02805	837 aa		4.02	□□□□□ -1.77
YAL004W	YAL004W	YMR074C	Q04773	145 aa		4.02	□□□□□ -1.77
YAL004W	YAL004W	EIS1	Q05050	843 aa	Known RBP	4.02	□□□□□ -1.77
YAL004W	YAL004W	YDR286C	Q05530	114 aa		4.02	□□□□□ -1.77
YAL004W	YAL004W	SGD1	Q06132	899 aa		4.02	□□□□□ -1.77
YAL004W	YAL004W	PEX15	Q08215	383 aa		4.02	□□□□□ -1.77
YAL004W	YAL004W	LAP2	Q10740	671 aa		4.02	□□□□□ -1.77
YAL004W	YAL004W	LSP1	Q12230	341 aa	Known RBP	4.02	□□□□□ -1.77
YAL004W	YAL004W	YOL114C	Q12322	202 aa		4.02	□□□□□ -1.77
YAL004W	YAL004W	ROM2	P51862	1356 aa	Known RBP	4.02	□□□□□ -1.77
YAL004W	YAL004W	DED1	P06634	604 aa	Known RBP	4.01	□□□□□ -1.77
YAL004W	YAL004W	NAT1	P12945	854 aa	Known RBP	4.01	□□□□□ -1.77
YAL004W	YAL004W	SPO16	P17122	198 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	SEC18	P18759	758 aa	Known RBP	4.01	□□□□□ -1.77
YAL004W	YAL004W	MSH3	P25336	1018 aa		4.01	□□□□□ -1.77
YAL004W	YAL004W	DHR2	P36009	735 aa	Predicted RBP	4.01	□□□□□ -1.77
YAL004W	YAL004W	DID4	P36108	232 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms