RNA–Protein interactions for RNA: ENST00000622827.4

CDH23-214, Transcript of cadherin related 23, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDH23, Length 11,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-214ENST00000622827 TSHZ3Q63HK5 1081 aa16.32■□□□□ 0.2
CDH23-214ENST00000622827 SYT10Q6XYQ8 523 aa16.32■□□□□ 0.2
CDH23-214ENST00000622827 NEK11Q8NG66 645 aa16.32■□□□□ 0.2
CDH23-214ENST00000622827 TXNDC16Q9P2K2 825 aa16.32■□□□□ 0.2
CDH23-214ENST00000622827 SAMM50Q9Y512 469 aa16.32■□□□□ 0.2
CDH23-214ENST00000622827 PPFIA3O75145 1194 aa16.31■□□□□ 0.2
CDH23-214ENST00000622827 ERCC6LQ2NKX8 1250 aa16.31■□□□□ 0.2
CDH23-214ENST00000622827 GKAP1Q5VSY0 366 aaPredicted RBP16.31■□□□□ 0.2
CDH23-214ENST00000622827 ZNF444Q8N0Y2 327 aaPredicted RBP16.31■□□□□ 0.2
CDH23-214ENST00000622827 IFNKQ9P0W0 207 aa16.31■□□□□ 0.2
CDH23-214ENST00000622827 A6NNZ2 444 aa16.31■□□□□ 0.2
CDH23-214ENST00000622827 TUBB8Q3ZCM7 444 aa16.31■□□□□ 0.2
CDH23-214ENST00000622827 THUMPD2Q9BTF0 503 aaKnown RBP16.31■□□□□ 0.2
CDH23-214ENST00000622827 ERCC3P19447 782 aa16.31■□□□□ 0.2
CDH23-214ENST00000622827 USP37Q86T82 979 aa16.31■□□□□ 0.2
CDH23-214ENST00000622827 CNGA4Q8IV77 575 aa16.31■□□□□ 0.2
CDH23-214ENST00000622827 GBP5Q96PP8 586 aa16.31■□□□□ 0.2
CDH23-214ENST00000622827 KIAA1524Q8TCG1 905 aa16.31■□□□□ 0.2
CDH23-214ENST00000622827 KIF14Q15058 1648 aa16.31■□□□□ 0.2
CDH23-214ENST00000622827 NDC80O14777 642 aa16.31■□□□□ 0.2
CDH23-214ENST00000622827 RAB11FIP4Q86YS3 637 aa16.31■□□□□ 0.2
CDH23-214ENST00000622827 TOM1L2Q6ZVM7 507 aa16.31■□□□□ 0.2
CDH23-214ENST00000622827 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.31■□□□□ 0.2
CDH23-214ENST00000622827 BAZ2BQ9UIF8 2168 aaKnown RBP16.3■□□□□ 0.2
CDH23-214ENST00000622827 HAND2P61296 217 aa16.3■□□□□ 0.2
CDH23-214ENST00000622827 TLDC2A0PJX2 215 aa16.3■□□□□ 0.2
CDH23-214ENST00000622827 NCOA7Q8NI08 942 aa16.3■□□□□ 0.2
CDH23-214ENST00000622827 DAPK1P53355 1430 aa16.3■□□□□ 0.2
CDH23-214ENST00000622827 HSPA1LP34931 641 aa16.3■□□□□ 0.2
CDH23-214ENST00000622827 NUCB1Q02818 461 aa16.3■□□□□ 0.2
CDH23-214ENST00000622827 ARAP1Q96P48 1450 aa16.3■□□□□ 0.2
CDH23-214ENST00000622827 MARCKSP29966 332 aaPredicted RBP16.3■□□□□ 0.2
CDH23-214ENST00000622827 BICDL2A1A5D9 508 aa16.3■□□□□ 0.2
CDH23-214ENST00000622827 ECHDC1Q9NTX5 307 aa16.3■□□□□ 0.2
CDH23-214ENST00000622827 DNM1Q05193 864 aaKnown RBP16.3■□□□□ 0.2
CDH23-214ENST00000622827 LRCH2Q5VUJ6 765 aa16.3■□□□□ 0.2
CDH23-214ENST00000622827 MYH9P35579 1960 aaKnown RBP16.29■□□□□ 0.2
CDH23-214ENST00000622827 PPP1R1BQ9UD71 204 aaPredicted RBP16.29■□□□□ 0.2
CDH23-214ENST00000622827 PCF11O94913 1555 aaKnown RBP16.29■□□□□ 0.2
CDH23-214ENST00000622827 ZNF131P52739 623 aa16.29■□□□□ 0.2
CDH23-214ENST00000622827 FMNL3Q8IVF7 1028 aa16.29■□□□□ 0.2
CDH23-214ENST00000622827 ARHGEF2Q92974 986 aaKnown RBP16.29■□□□□ 0.2
CDH23-214ENST00000622827 GPR161Q8N6U8 529 aaKnown RBP16.29■□□□□ 0.2
CDH23-214ENST00000622827 MYCBPQ99417 103 aaPredicted RBP16.29■□□□□ 0.2
CDH23-214ENST00000622827 DACT1Q9NYF0 836 aa16.29■□□□□ 0.2
CDH23-214ENST00000622827 ZNF652Q9Y2D9 606 aa16.29■□□□□ 0.2
CDH23-214ENST00000622827 SLF2Q8IX21 1173 aa16.29■□□□□ 0.2
CDH23-214ENST00000622827 GOLGA6BA6NDN3 693 aa16.28■□□□□ 0.2
CDH23-214ENST00000622827 PLCB3Q01970 1234 aa16.28■□□□□ 0.2
CDH23-214ENST00000622827 ATP6V0A2Q9Y487 856 aa16.28■□□□□ 0.2
CDH23-214ENST00000622827 PDE4BQ07343 736 aa16.28■□□□□ 0.2
CDH23-214ENST00000622827 CCDC122Q5T0U0 273 aa16.28■□□□□ 0.2
CDH23-214ENST00000622827 STARD3NLO95772 234 aa16.28■□□□□ 0.2
CDH23-214ENST00000622827 NEK1Q96PY6 1258 aa16.28■□□□□ 0.2
CDH23-214ENST00000622827 TCHPQ9BT92 498 aa16.28■□□□□ 0.2
CDH23-214ENST00000622827 CRCPO75575 148 aa16.28■□□□□ 0.2
CDH23-214ENST00000622827 F13A1P00488 732 aa16.28■□□□□ 0.2
CDH23-214ENST00000622827 ELF2Q15723 593 aa16.28■□□□□ 0.2
CDH23-214ENST00000622827 UTP11Q9Y3A2 253 aaKnown RBP16.28■□□□□ 0.2
CDH23-214ENST00000622827 SH3BP5O60239 455 aa16.28■□□□□ 0.2
CDH23-214ENST00000622827 CCDC26Q8TAB7 109 aa16.28■□□□□ 0.2
CDH23-214ENST00000622827 SYNJ1O43426 1573 aa16.28■□□□□ 0.2
CDH23-214ENST00000622827 CCDC8Q9H0W5 538 aaPredicted RBP16.28■□□□□ 0.2
CDH23-214ENST00000622827 RAB3GAP1Q15042 981 aa16.28■□□□□ 0.2
CDH23-214ENST00000622827 NECAB1Q8N987 351 aa16.28■□□□□ 0.2
CDH23-214ENST00000622827 KAT14Q9H8E8 782 aa16.28■□□□□ 0.2
CDH23-214ENST00000622827 SNX16P57768 344 aa16.27■□□□□ 0.2
CDH23-214ENST00000622827 SEL1L2Q5TEA6 688 aa16.27■□□□□ 0.2
CDH23-214ENST00000622827 ARHGAP24Q8N264 748 aa16.27■□□□□ 0.2
CDH23-214ENST00000622827 DDX27Q96GQ7 796 aaKnown RBP16.27■□□□□ 0.2
CDH23-214ENST00000622827 CADPSQ9ULU8 1353 aa16.27■□□□□ 0.2
CDH23-214ENST00000622827 PPP1R9BQ96SB3 815 aa16.27■□□□□ 0.2
CDH23-214ENST00000622827 NAPGQ99747 312 aaPredicted RBP16.27■□□□□ 0.2
CDH23-214ENST00000622827 GIGYF1O75420 1035 aaPredicted RBP16.27■□□□□ 0.2
CDH23-214ENST00000622827 U2AF2P26368 475 aaKnown RBP eCLIP16.27■□□□□ 0.2
CDH23-214ENST00000622827 CALCOCO2Q13137 446 aa16.27■□□□□ 0.2
CDH23-214ENST00000622827 BAG1Q99933 345 aaPredicted RBP16.27■□□□□ 0.19
CDH23-214ENST00000622827 SYNJ2O15056 1496 aa16.27■□□□□ 0.19
CDH23-214ENST00000622827 TCHHQ07283 1943 aa16.27■□□□□ 0.19
CDH23-214ENST00000622827 EIF2AK4Q9P2K8 1649 aaKnown RBP16.27■□□□□ 0.19
CDH23-214ENST00000622827 GCKP35557 465 aa16.27■□□□□ 0.19
CDH23-214ENST00000622827 PAXIP1Q6ZW49 1069 aaPredicted RBP16.27■□□□□ 0.19
CDH23-214ENST00000622827 UAP1Q16222 522 aaPredicted RBP16.26■□□□□ 0.19
CDH23-214ENST00000622827 MYD88Q99836 296 aa16.26■□□□□ 0.19
CDH23-214ENST00000622827 RTN1Q16799 776 aa16.26■□□□□ 0.19
CDH23-214ENST00000622827 MYRIPQ8NFW9 859 aa16.26■□□□□ 0.19
CDH23-214ENST00000622827 VPS52Q8N1B4 723 aa16.26■□□□□ 0.19
CDH23-214ENST00000622827 ZNF354CQ86Y25 554 aa16.26■□□□□ 0.19
CDH23-214ENST00000622827 AKR1B15C9JRZ8 316 aaPredicted RBP16.26■□□□□ 0.19
CDH23-214ENST00000622827 I3L4J1 428 aa16.26■□□□□ 0.19
CDH23-214ENST00000622827 ZNF692Q9BU19 519 aaPredicted RBP16.26■□□□□ 0.19
CDH23-214ENST00000622827 CLUL1Q15846 466 aa16.26■□□□□ 0.19
CDH23-214ENST00000622827 SNX21Q969T3 373 aa16.26■□□□□ 0.19
CDH23-214ENST00000622827 MAK16Q9BXY0 300 aaKnown RBP16.26■□□□□ 0.19
CDH23-214ENST00000622827 MTUS1Q9ULD2 1270 aa16.26■□□□□ 0.19
CDH23-214ENST00000622827 IFT20Q8IY31 132 aa16.26■□□□□ 0.19
CDH23-214ENST00000622827 STMN1P16949 149 aa16.25■□□□□ 0.19
CDH23-214ENST00000622827 PNMA8AQ86V59 439 aaPredicted RBP16.25■□□□□ 0.19
CDH23-214ENST00000622827 PFDN4Q9NQP4 134 aa16.25■□□□□ 0.19
CDH23-214ENST00000622827 RNF10Q8N5U6 811 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms