RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 DDX41Q9UJV9 622 aaKnown RBP12.52□□□□□ -0.41
CDH1-214ENST00000621016 CYP27B1O15528 508 aa12.52□□□□□ -0.41
CDH1-214ENST00000621016 SNRPA1P09661 255 aaKnown RBP12.52□□□□□ -0.41
CDH1-214ENST00000621016 RGPD1P0DJD0 1748 aa12.52□□□□□ -0.41
CDH1-214ENST00000621016 ERBB3P21860 1342 aa12.52□□□□□ -0.41
CDH1-214ENST00000621016 NCAPGQ9BPX3 1015 aa12.52□□□□□ -0.41
CDH1-214ENST00000621016 EFCC1Q9HA90 598 aa12.52□□□□□ -0.41
CDH1-214ENST00000621016 PYCARDQ9ULZ3 195 aa12.52□□□□□ -0.41
CDH1-214ENST00000621016 NWD1Q149M9 1564 aa12.51□□□□□ -0.41
CDH1-214ENST00000621016 HIP1O00291 1037 aa12.51□□□□□ -0.41
CDH1-214ENST00000621016 PHKG2P15735 406 aa12.51□□□□□ -0.41
CDH1-214ENST00000621016 LRRC24Q50LG9 513 aa12.51□□□□□ -0.41
CDH1-214ENST00000621016 IFNL2Q8IZJ0 200 aa12.51□□□□□ -0.41
CDH1-214ENST00000621016 ANKRD7Q92527 254 aa12.51□□□□□ -0.41
CDH1-214ENST00000621016 FMNL2Q96PY5 1086 aa12.51□□□□□ -0.41
CDH1-214ENST00000621016 KAT6BQ8WYB5 2073 aa12.51□□□□□ -0.41
CDH1-214ENST00000621016 TYRO3Q06418 890 aa12.51□□□□□ -0.41
CDH1-214ENST00000621016 PUS3Q9BZE2 481 aaKnown RBP12.51□□□□□ -0.41
CDH1-214ENST00000621016 PDCP20941 246 aa12.5□□□□□ -0.41
CDH1-214ENST00000621016 SKIDA1Q1XH10 827 aa12.5□□□□□ -0.41
CDH1-214ENST00000621016 YY1AP1Q9H869 796 aa12.5□□□□□ -0.41
CDH1-214ENST00000621016 KRBA2Q6ZNG9 492 aa12.5□□□□□ -0.41
CDH1-214ENST00000621016 TOM1L2Q6ZVM7 507 aa12.5□□□□□ -0.41
CDH1-214ENST00000621016 NOL10Q9BSC4 688 aaKnown RBP12.5□□□□□ -0.41
CDH1-214ENST00000621016 GJB4Q9NTQ9 266 aa12.5□□□□□ -0.41
CDH1-214ENST00000621016 CCDC172P0C7W6 258 aa12.5□□□□□ -0.41
CDH1-214ENST00000621016 TDO2P48775 406 aa12.5□□□□□ -0.41
CDH1-214ENST00000621016 CCDC186Q7Z3E2 898 aa12.5□□□□□ -0.41
CDH1-214ENST00000621016 KIF18AQ8NI77 898 aa12.5□□□□□ -0.41
CDH1-214ENST00000621016 LEO1Q8WVC0 666 aaPredicted RBP12.5□□□□□ -0.41
CDH1-214ENST00000621016 TSPYL1Q9H0U9 437 aa12.5□□□□□ -0.41
CDH1-214ENST00000621016 POLR3DP05423 398 aaPredicted RBP12.49□□□□□ -0.41
CDH1-214ENST00000621016 ISM2Q6H9L7 571 aa12.49□□□□□ -0.41
CDH1-214ENST00000621016 PI16Q6UXB8 463 aa12.49□□□□□ -0.41
CDH1-214ENST00000621016 TM6SF1Q9BZW5 370 aa12.49□□□□□ -0.41
CDH1-214ENST00000621016 ME1P48163 572 aa12.49□□□□□ -0.41
CDH1-214ENST00000621016 GPTP24298 496 aa12.49□□□□□ -0.41
CDH1-214ENST00000621016 ANKRD1Q15327 319 aa12.49□□□□□ -0.41
CDH1-214ENST00000621016 MCMDC2Q4G0Z9 681 aa12.49□□□□□ -0.41
CDH1-214ENST00000621016 ANKARQ7Z5J8 1434 aa12.48□□□□□ -0.41
CDH1-214ENST00000621016 ZNF165P49910 485 aa12.48□□□□□ -0.41
CDH1-214ENST00000621016 SCRN1Q12765 414 aa12.48□□□□□ -0.41
CDH1-214ENST00000621016 FILIP1Q7Z7B0 1213 aa12.48□□□□□ -0.41
CDH1-214ENST00000621016 SYNE4Q8N205 404 aa12.48□□□□□ -0.41
CDH1-214ENST00000621016 MYO1CO00159 1063 aa12.48□□□□□ -0.41
CDH1-214ENST00000621016 STOX1Q6ZVD7 989 aa12.48□□□□□ -0.41
CDH1-214ENST00000621016 SYTL4Q96C24 671 aaPredicted RBP12.48□□□□□ -0.41
CDH1-214ENST00000621016 PGBD1Q96JS3 809 aa12.48□□□□□ -0.41
CDH1-214ENST00000621016 CBX8Q9HC52 389 aa12.48□□□□□ -0.41
CDH1-214ENST00000621016 IFIT1P09914 478 aaKnown RBP12.47□□□□□ -0.41
CDH1-214ENST00000621016 RXRAP19793 462 aa12.47□□□□□ -0.41
CDH1-214ENST00000621016 CCDC191Q8NCU4 936 aa12.47□□□□□ -0.41
CDH1-214ENST00000621016 FAM89AQ96GI7 184 aa12.47□□□□□ -0.41
CDH1-214ENST00000621016 CALR3Q96L12 384 aaKnown RBP12.47□□□□□ -0.41
CDH1-214ENST00000621016 MRVI1Q9Y6F6 885 aa12.47□□□□□ -0.41
CDH1-214ENST00000621016 COL15A1P39059 1388 aa12.47□□□□□ -0.41
CDH1-214ENST00000621016 TMEM87AQ8NBN3 555 aa12.47□□□□□ -0.41
CDH1-214ENST00000621016 SCAND2PQ9GZW5 306 aaPredicted RBP12.47□□□□□ -0.41
CDH1-214ENST00000621016 PRDM11Q9NQV5 511 aa12.47□□□□□ -0.41
CDH1-214ENST00000621016 PAG1Q9NWQ8 432 aa12.47□□□□□ -0.41
CDH1-214ENST00000621016 USP42Q9H9J4 1324 aaKnown RBP12.47□□□□□ -0.41
CDH1-214ENST00000621016 XRN1Q8IZH2 1706 aaKnown RBP12.47□□□□□ -0.41
CDH1-214ENST00000621016 FMN2Q9NZ56 1722 aa12.47□□□□□ -0.41
CDH1-214ENST00000621016 GOLGA6L6A8MZA4 724 aa12.47□□□□□ -0.41
CDH1-214ENST00000621016 BIN1O00499 593 aa12.47□□□□□ -0.41
CDH1-214ENST00000621016 PPP2R5AQ15172 486 aa12.47□□□□□ -0.41
CDH1-214ENST00000621016 CCDC144CPQ8IYA2 1237 aa12.47□□□□□ -0.41
CDH1-214ENST00000621016 ATP5JP18859 108 aa12.46□□□□□ -0.41
CDH1-214ENST00000621016 HSPA2P54652 639 aa12.46□□□□□ -0.41
CDH1-214ENST00000621016 SF3A1Q15459 793 aaKnown RBP12.46□□□□□ -0.41
CDH1-214ENST00000621016 UVSSAQ2YD98 709 aa12.46□□□□□ -0.41
CDH1-214ENST00000621016 FAM200AQ8TCP9 573 aa12.46□□□□□ -0.41
CDH1-214ENST00000621016 KCNF1Q9H3M0 494 aa12.46□□□□□ -0.41
CDH1-214ENST00000621016 JRKLQ9Y4A0 524 aa12.46□□□□□ -0.41
CDH1-214ENST00000621016 TOPAZ1Q8N9V7 1692 aa12.46□□□□□ -0.41
CDH1-214ENST00000621016 BECN2A8MW95 431 aa12.46□□□□□ -0.42
CDH1-214ENST00000621016 NBPF26B4DH59 902 aa12.46□□□□□ -0.42
CDH1-214ENST00000621016 IBSPP21815 317 aaPredicted RBP12.46□□□□□ -0.42
CDH1-214ENST00000621016 ARID5BQ14865 1188 aa12.46□□□□□ -0.42
CDH1-214ENST00000621016 NBPF14Q5TI25 921 aa12.46□□□□□ -0.42
CDH1-214ENST00000621016 NBPF10Q6P3W6 841 aaKnown RBP12.46□□□□□ -0.42
CDH1-214ENST00000621016 NBPF15Q8N660 670 aa12.46□□□□□ -0.42
CDH1-214ENST00000621016 PTPDC1A2A3K4 754 aa12.45□□□□□ -0.42
CDH1-214ENST00000621016 GOLGA6L19H0YKK7 550 aa12.45□□□□□ -0.42
CDH1-214ENST00000621016 SDF4Q9BRK5 362 aa12.45□□□□□ -0.42
CDH1-214ENST00000621016 ZNF446Q9NWS9 450 aa12.45□□□□□ -0.42
CDH1-214ENST00000621016 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.45□□□□□ -0.42
CDH1-214ENST00000621016 NALCNQ8IZF0 1738 aa12.45□□□□□ -0.42
CDH1-214ENST00000621016 PXDNLA1KZ92 1463 aa12.45□□□□□ -0.42
CDH1-214ENST00000621016 A0A1B0GUL7 405 aa12.45□□□□□ -0.42
CDH1-214ENST00000621016 ADORA1P30542 326 aa12.45□□□□□ -0.42
CDH1-214ENST00000621016 KMT5BQ4FZB7 885 aa12.45□□□□□ -0.42
CDH1-214ENST00000621016 CCAR1Q8IX12 1150 aaKnown RBP12.45□□□□□ -0.42
CDH1-214ENST00000621016 COPRSQ9NQ92 184 aa12.45□□□□□ -0.42
CDH1-214ENST00000621016 FAM208AQ9UK61 1670 aaKnown RBP12.45□□□□□ -0.42
CDH1-214ENST00000621016 EPB41L2O43491 1005 aaKnown RBP12.45□□□□□ -0.42
CDH1-214ENST00000621016 CASQ1P31415 396 aa12.45□□□□□ -0.42
CDH1-214ENST00000621016 BIRC2Q13490 618 aa12.45□□□□□ -0.42
CDH1-214ENST00000621016 SGSM3Q96HU1 749 aa12.45□□□□□ -0.42
CDH1-214ENST00000621016 C19orf44Q9H6X5 657 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms