RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 TNFRSF25Q93038 417 aa11.13□□□□□ -0.63
CBWD1-228ENST00000619157 HSH2DQ96JZ2 352 aa11.13□□□□□ -0.63
CBWD1-228ENST00000619157 NEXMIFQ5QGS0 1516 aa11.13□□□□□ -0.63
CBWD1-228ENST00000619157 NRXN3Q9Y4C0 1643 aa11.13□□□□□ -0.63
CBWD1-228ENST00000619157 NWD1Q149M9 1564 aa11.12□□□□□ -0.63
CBWD1-228ENST00000619157 XIRP1Q702N8 1843 aaKnown RBP11.12□□□□□ -0.63
CBWD1-228ENST00000619157 NID1P14543 1247 aa11.12□□□□□ -0.63
CBWD1-228ENST00000619157 PRSS36Q5K4E3 855 aa11.12□□□□□ -0.63
CBWD1-228ENST00000619157 C7orf43Q8WVR3 580 aa11.12□□□□□ -0.63
CBWD1-228ENST00000619157 MPHOSPH9Q99550 1183 aa11.12□□□□□ -0.63
CBWD1-228ENST00000619157 SERTM1A2A2V5 107 aa11.11□□□□□ -0.63
CBWD1-228ENST00000619157 PRDM6Q9NQX0 595 aa11.11□□□□□ -0.63
CBWD1-228ENST00000619157 NACC1Q96RE7 527 aa11.1□□□□□ -0.63
CBWD1-228ENST00000619157 BRD7Q9NPI1 651 aa11.1□□□□□ -0.63
CBWD1-228ENST00000619157 PTPRUQ92729 1446 aa11.09□□□□□ -0.63
CBWD1-228ENST00000619157 UBAP1LF5GYI3 381 aa11.09□□□□□ -0.63
CBWD1-228ENST00000619157 KCNA6P17658 529 aa11.09□□□□□ -0.63
CBWD1-228ENST00000619157 TBC1D8BQ0IIM8 1120 aa11.09□□□□□ -0.63
CBWD1-228ENST00000619157 CEP63Q96MT8 703 aa11.09□□□□□ -0.63
CBWD1-228ENST00000619157 ZFP64Q9NPA5 681 aa11.09□□□□□ -0.63
CBWD1-228ENST00000619157 SPATA31E1Q6ZUB1 1445 aa11.09□□□□□ -0.63
CBWD1-228ENST00000619157 SETBP1Q9Y6X0 1596 aa11.08□□□□□ -0.64
CBWD1-228ENST00000619157 TMEM94Q12767 1356 aa11.08□□□□□ -0.64
CBWD1-228ENST00000619157 PPP1R15AO75807 674 aaPredicted RBP11.08□□□□□ -0.64
CBWD1-228ENST00000619157 MCM6Q14566 821 aa11.08□□□□□ -0.64
CBWD1-228ENST00000619157 TRAPPC3LQ5T215 181 aa11.08□□□□□ -0.64
CBWD1-228ENST00000619157 ARTNQ5T4W7 220 aa11.08□□□□□ -0.64
CBWD1-228ENST00000619157 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.08□□□□□ -0.64
CBWD1-228ENST00000619157 TBX22Q9Y458 520 aa11.08□□□□□ -0.64
CBWD1-228ENST00000619157 CHD2O14647 1828 aaKnown RBP11.07□□□□□ -0.64
CBWD1-228ENST00000619157 NEUROD1Q13562 356 aa11.07□□□□□ -0.64
CBWD1-228ENST00000619157 HCN4Q9Y3Q4 1203 aa11.07□□□□□ -0.64
CBWD1-228ENST00000619157 GPC6Q9Y625 555 aaPredicted RBP11.07□□□□□ -0.64
CBWD1-228ENST00000619157 KIF1BO60333 1816 aa11.07□□□□□ -0.64
CBWD1-228ENST00000619157 DIP2AQ14689 1571 aa11.07□□□□□ -0.64
CBWD1-228ENST00000619157 NKTRP30414 1462 aaKnown RBP11.06□□□□□ -0.64
CBWD1-228ENST00000619157 SFI1A8K8P3 1242 aa11.06□□□□□ -0.64
CBWD1-228ENST00000619157 USP17L5A8MUK1 530 aa11.06□□□□□ -0.64
CBWD1-228ENST00000619157 ZNF326Q5BKZ1 582 aaKnown RBP11.06□□□□□ -0.64
CBWD1-228ENST00000619157 C20orf204Q6ZNR8 217 aa11.06□□□□□ -0.64
CBWD1-228ENST00000619157 ZNF280CQ8ND82 737 aa11.06□□□□□ -0.64
CBWD1-228ENST00000619157 TPCN2Q8NHX9 752 aa11.06□□□□□ -0.64
CBWD1-228ENST00000619157 BHMTQ93088 406 aa11.06□□□□□ -0.64
CBWD1-228ENST00000619157 TSPAN10Q9H1Z9 355 aaPredicted RBP11.06□□□□□ -0.64
CBWD1-228ENST00000619157 KIAA1024Q9UPX6 916 aa11.06□□□□□ -0.64
CBWD1-228ENST00000619157 METP08581 1390 aa11.05□□□□□ -0.64
CBWD1-228ENST00000619157 CCDC144AA2RUR9 1427 aa11.05□□□□□ -0.64
CBWD1-228ENST00000619157 SETD1AO15047 1707 aaKnown RBP11.05□□□□□ -0.64
CBWD1-228ENST00000619157 PHACTR1Q9C0D0 580 aa11.05□□□□□ -0.64
CBWD1-228ENST00000619157 IGFLR1Q9H665 355 aa11.05□□□□□ -0.64
CBWD1-228ENST00000619157 COG6Q9Y2V7 657 aa11.05□□□□□ -0.64
CBWD1-228ENST00000619157 PPLO60437 1756 aa11.04□□□□□ -0.64
CBWD1-228ENST00000619157 ALG2Q9H553 416 aa11.04□□□□□ -0.64
CBWD1-228ENST00000619157 XRN1Q8IZH2 1706 aaKnown RBP11.04□□□□□ -0.64
CBWD1-228ENST00000619157 PIK3R4Q99570 1358 aa11.03□□□□□ -0.64
CBWD1-228ENST00000619157 ANKRD30BQ9BXX2 1392 aa11.03□□□□□ -0.64
CBWD1-228ENST00000619157 LILRB5O75023 590 aa11.03□□□□□ -0.64
CBWD1-228ENST00000619157 SELPP16109 830 aa11.03□□□□□ -0.64
CBWD1-228ENST00000619157 PIP4K2BP78356 416 aa11.03□□□□□ -0.64
CBWD1-228ENST00000619157 TYRO3Q06418 890 aa11.03□□□□□ -0.64
CBWD1-228ENST00000619157 MBTPS1Q14703 1052 aa11.03□□□□□ -0.64
CBWD1-228ENST00000619157 SHISA2Q6UWI4 295 aa11.03□□□□□ -0.64
CBWD1-228ENST00000619157 NBPF11Q86T75 865 aa11.03□□□□□ -0.64
CBWD1-228ENST00000619157 KRTAP1-3Q8IUG1 177 aa11.03□□□□□ -0.64
CBWD1-228ENST00000619157 KCNH4Q9UQ05 1017 aa11.03□□□□□ -0.64
CBWD1-228ENST00000619157 IFT172Q9UG01 1749 aa11.03□□□□□ -0.64
CBWD1-228ENST00000619157 A0A0A0MRY4 1105 aa11.02□□□□□ -0.65
CBWD1-228ENST00000619157 LZTS3O60299 673 aaPredicted RBP11.02□□□□□ -0.65
CBWD1-228ENST00000619157 PSMA6P60900 246 aaKnown RBP11.02□□□□□ -0.65
CBWD1-228ENST00000619157 ADGRE1Q14246 886 aa11.02□□□□□ -0.65
CBWD1-228ENST00000619157 PROSER2Q86WR7 435 aaPredicted RBP11.02□□□□□ -0.65
CBWD1-228ENST00000619157 NFATC2IPQ8NCF5 419 aa11.02□□□□□ -0.65
CBWD1-228ENST00000619157 NUDT8Q8WV74 236 aa11.02□□□□□ -0.65
CBWD1-228ENST00000619157 UBE2OQ9C0C9 1292 aaKnown RBP11.02□□□□□ -0.65
CBWD1-228ENST00000619157 ADGRF5Q8IZF2 1346 aa11.02□□□□□ -0.65
CBWD1-228ENST00000619157 C9orf172C9J069 976 aa11.01□□□□□ -0.65
CBWD1-228ENST00000619157 TOM1O60784 492 aa11.01□□□□□ -0.65
CBWD1-228ENST00000619157 HSPA1LP34931 641 aa11.01□□□□□ -0.65
CBWD1-228ENST00000619157 SUSD3Q96L08 255 aa11.01□□□□□ -0.65
CBWD1-228ENST00000619157 JPH1Q9HDC5 661 aaPredicted RBP11.01□□□□□ -0.65
CBWD1-228ENST00000619157 AMOTL2Q9Y2J4 779 aa11.01□□□□□ -0.65
CBWD1-228ENST00000619157 RPGRIP1LQ68CZ1 1315 aa11.01□□□□□ -0.65
CBWD1-228ENST00000619157 ASXL1Q8IXJ9 1541 aa11□□□□□ -0.65
CBWD1-228ENST00000619157 RGL3Q3MIN7 710 aa11□□□□□ -0.65
CBWD1-228ENST00000619157 CCDC102BQ68D86 513 aa11□□□□□ -0.65
CBWD1-228ENST00000619157 SLC6A14Q9UN76 642 aa11□□□□□ -0.65
CBWD1-228ENST00000619157 ELNP15502 786 aa10.99□□□□□ -0.65
CBWD1-228ENST00000619157 KCNQ4P56696 695 aa10.99□□□□□ -0.65
CBWD1-228ENST00000619157 CLDN10P78369 228 aa10.99□□□□□ -0.65
CBWD1-228ENST00000619157 C1orf53Q5VUE5 145 aa10.99□□□□□ -0.65
CBWD1-228ENST00000619157 TXNRD3Q86VQ6 643 aa10.99□□□□□ -0.65
CBWD1-228ENST00000619157 ANKIB1Q9P2G1 1089 aa10.99□□□□□ -0.65
CBWD1-228ENST00000619157 CHMP3Q9Y3E7 222 aa10.99□□□□□ -0.65
CBWD1-228ENST00000619157 ACIN1Q9UKV3 1341 aaKnown RBP10.99□□□□□ -0.65
CBWD1-228ENST00000619157 ZBTB7BO15156 539 aaPredicted RBP10.98□□□□□ -0.65
CBWD1-228ENST00000619157 TRIM50Q86XT4 487 aa10.98□□□□□ -0.65
CBWD1-228ENST00000619157 PIK3C2GO75747 1445 aa10.98□□□□□ -0.65
CBWD1-228ENST00000619157 PRAG1Q86YV5 1406 aa10.98□□□□□ -0.65
CBWD1-228ENST00000619157 NRXN1Q9ULB1 1477 aa10.98□□□□□ -0.65
CBWD1-228ENST00000619157 H2AFB1P0C5Y9 115 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms