RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 GOLGA6L9A6NEM1 432 aa16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 CLCN1P35523 988 aa16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 TNNI3KQ59H18 835 aa16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 TAF3Q5VWG9 929 aa16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 RRAGBQ5VZM2 374 aa16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 CEP135Q66GS9 1140 aa16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 CCDC129Q6ZRS4 1044 aa16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 FEZ1Q99689 392 aa16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 FPGT-TNNI3KV9GXZ4 949 aa16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 EYA2O00167 538 aa16.33■□□□□ 0.21
PCDHB16-201ENST00000609684 SKILP12757 684 aa16.33■□□□□ 0.21
PCDHB16-201ENST00000609684 GNAT2P19087 354 aa16.33■□□□□ 0.21
PCDHB16-201ENST00000609684 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.33■□□□□ 0.21
PCDHB16-201ENST00000609684 TTC12Q9H892 705 aaPredicted RBP16.33■□□□□ 0.21
PCDHB16-201ENST00000609684 A0A1B0GUL7 405 aa16.33■□□□□ 0.2
PCDHB16-201ENST00000609684 RXRAP19793 462 aa16.33■□□□□ 0.2
PCDHB16-201ENST00000609684 HEATR3Q7Z4Q2 680 aa16.33■□□□□ 0.2
PCDHB16-201ENST00000609684 GNG11P61952 73 aa16.33■□□□□ 0.2
PCDHB16-201ENST00000609684 NOLC1Q14978 699 aaKnown RBP eCLIP16.33■□□□□ 0.2
PCDHB16-201ENST00000609684 SEPT7Q16181 437 aaKnown RBP16.33■□□□□ 0.2
PCDHB16-201ENST00000609684 FAM114A1Q8IWE2 563 aa16.33■□□□□ 0.2
PCDHB16-201ENST00000609684 PAFAH1B1P43034 410 aa16.33■□□□□ 0.2
PCDHB16-201ENST00000609684 TRIM75PA6NK02 468 aa16.32■□□□□ 0.2
PCDHB16-201ENST00000609684 F8W031 263 aaPredicted RBP16.32■□□□□ 0.2
PCDHB16-201ENST00000609684 GNAQP50148 359 aa16.32■□□□□ 0.2
PCDHB16-201ENST00000609684 TRMT1LQ7Z2T5 733 aaKnown RBP16.32■□□□□ 0.2
PCDHB16-201ENST00000609684 RMND1Q9NWS8 449 aa16.32■□□□□ 0.2
PCDHB16-201ENST00000609684 ZKSCAN5Q9Y2L8 839 aa16.32■□□□□ 0.2
PCDHB16-201ENST00000609684 PLEKHG3A1L390 1219 aa16.32■□□□□ 0.2
PCDHB16-201ENST00000609684 STAT6P42226 847 aa16.32■□□□□ 0.2
PCDHB16-201ENST00000609684 MAP9Q49MG5 647 aa16.32■□□□□ 0.2
PCDHB16-201ENST00000609684 EHMT1Q9H9B1 1298 aa16.32■□□□□ 0.2
PCDHB16-201ENST00000609684 HELLSQ9NRZ9 838 aa16.32■□□□□ 0.2
PCDHB16-201ENST00000609684 MAGI2Q86UL8 1455 aa16.32■□□□□ 0.2
PCDHB16-201ENST00000609684 SGSM2O43147 1006 aa16.32■□□□□ 0.2
PCDHB16-201ENST00000609684 CCDC178Q5BJE1 867 aa16.32■□□□□ 0.2
PCDHB16-201ENST00000609684 EXOC1Q9NV70 894 aa16.32■□□□□ 0.2
PCDHB16-201ENST00000609684 PLXNC1O60486 1568 aa16.32■□□□□ 0.2
PCDHB16-201ENST00000609684 POTEJP0CG39 1038 aa16.31■□□□□ 0.2
PCDHB16-201ENST00000609684 LUZP1Q86V48 1076 aa16.31■□□□□ 0.2
PCDHB16-201ENST00000609684 PRIMPOLQ96LW4 560 aa16.31■□□□□ 0.2
PCDHB16-201ENST00000609684 SNX14Q9Y5W7 946 aa16.31■□□□□ 0.2
PCDHB16-201ENST00000609684 AOX1Q06278 1338 aa16.31■□□□□ 0.2
PCDHB16-201ENST00000609684 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.31■□□□□ 0.2
PCDHB16-201ENST00000609684 SUCLG2Q96I99 432 aa16.31■□□□□ 0.2
PCDHB16-201ENST00000609684 FAM227BQ96M60 508 aa16.31■□□□□ 0.2
PCDHB16-201ENST00000609684 C8orf37Q96NL8 207 aa16.31■□□□□ 0.2
PCDHB16-201ENST00000609684 KDM6BO15054 1643 aa16.31■□□□□ 0.2
PCDHB16-201ENST00000609684 SLC27A2O14975 620 aa16.31■□□□□ 0.2
PCDHB16-201ENST00000609684 RPS6KB1P23443 525 aa16.31■□□□□ 0.2
PCDHB16-201ENST00000609684 LMOD1P29536 600 aaPredicted RBP16.31■□□□□ 0.2
PCDHB16-201ENST00000609684 TPTE2Q6XPS3 522 aa16.31■□□□□ 0.2
PCDHB16-201ENST00000609684 PAF1Q8N7H5 531 aa16.31■□□□□ 0.2
PCDHB16-201ENST00000609684 SLC52A2Q9HAB3 445 aa16.31■□□□□ 0.2
PCDHB16-201ENST00000609684 DHX58Q96C10 678 aa16.3■□□□□ 0.2
PCDHB16-201ENST00000609684 BTG4Q9NY30 223 aa16.3■□□□□ 0.2
PCDHB16-201ENST00000609684 KDM5AP29375 1690 aaKnown RBP16.3■□□□□ 0.2
PCDHB16-201ENST00000609684 NYXQ9GZU5 481 aa16.3■□□□□ 0.2
PCDHB16-201ENST00000609684 ARHGEF10O15013 1369 aa16.3■□□□□ 0.2
PCDHB16-201ENST00000609684 KIAA0232Q92628 1395 aa16.3■□□□□ 0.2
PCDHB16-201ENST00000609684 PICALMQ13492 652 aa16.3■□□□□ 0.2
PCDHB16-201ENST00000609684 MCM9Q9NXL9 1143 aa16.3■□□□□ 0.2
PCDHB16-201ENST00000609684 PAXBP1Q9Y5B6 917 aa16.3■□□□□ 0.2
PCDHB16-201ENST00000609684 TMEM2Q9UHN6 1383 aa16.3■□□□□ 0.2
PCDHB16-201ENST00000609684 ZSWIM4Q9H7M6 989 aa16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 MBD4O95243 580 aa16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 EIF4A1P60842 406 aaKnown RBP16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 PRDM10Q9NQV6 1147 aa16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 RTL9Q8NET4 1388 aa16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 ABCC4O15439 1325 aa16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 TRIM21P19474 475 aaKnown RBP16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 NAPAP54920 295 aa16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 BRAPQ7Z569 592 aa16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 ZNF594Q96JF6 807 aaPredicted RBP16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 A1BGP04217 495 aa16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 CALM1P0DP23 149 aa16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 CALM2P0DP24 149 aa16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 CALM3P0DP25 149 aa16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 MCM3P25205 808 aa16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 ZNF804AQ7Z570 1209 aa16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 ALS2CR12Q96Q35 445 aa16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 LRRC27Q9C0I9 530 aa16.29■□□□□ 0.2
PCDHB16-201ENST00000609684 TOM1O60784 492 aa16.28■□□□□ 0.2
PCDHB16-201ENST00000609684 ITGA6P23229 1130 aa16.28■□□□□ 0.2
PCDHB16-201ENST00000609684 CETN2P41208 172 aa16.28■□□□□ 0.2
PCDHB16-201ENST00000609684 DYNC1I1O14576 645 aa16.28■□□□□ 0.2
PCDHB16-201ENST00000609684 PPP4R3AQ6IN85 833 aa16.28■□□□□ 0.2
PCDHB16-201ENST00000609684 GCKRQ14397 625 aa16.28■□□□□ 0.2
PCDHB16-201ENST00000609684 CTAGE1Q96RT6 745 aa16.28■□□□□ 0.2
PCDHB16-201ENST00000609684 NSFL1CQ9UNZ2 370 aaKnown RBP16.28■□□□□ 0.2
PCDHB16-201ENST00000609684 SPAG1Q07617 926 aa16.28■□□□□ 0.2
PCDHB16-201ENST00000609684 ZNF496Q96IT1 587 aaPredicted RBP16.28■□□□□ 0.2
PCDHB16-201ENST00000609684 TARBP1Q13395 1621 aaKnown RBP16.27■□□□□ 0.2
PCDHB16-201ENST00000609684 UBAP1LF5GYI3 381 aa16.27■□□□□ 0.2
PCDHB16-201ENST00000609684 ZKSCAN3Q9BRR0 538 aa16.27■□□□□ 0.2
PCDHB16-201ENST00000609684 POLR3GO15318 223 aaPredicted RBP16.27■□□□□ 0.2
PCDHB16-201ENST00000609684 CETN1Q12798 172 aa16.27■□□□□ 0.2
PCDHB16-201ENST00000609684 JAG2Q9Y219 1238 aa16.27■□□□□ 0.2
PCDHB16-201ENST00000609684 RTCBQ9Y3I0 505 aaKnown RBP16.27■□□□□ 0.2
PCDHB16-201ENST00000609684 ANKRD62A6NC57 917 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms