RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 LDHAL6AQ6ZMR3 332 aa19.72■□□□□ 0.75
CTDP1-207ENST00000591598 HELBQ8NG08 1087 aaPredicted RBP19.72■□□□□ 0.75
CTDP1-207ENST00000591598 CNNM1Q9NRU3 951 aa19.72■□□□□ 0.75
CTDP1-207ENST00000591598 GJB4Q9NTQ9 266 aa19.72■□□□□ 0.75
CTDP1-207ENST00000591598 CTDNEP1O95476 244 aa19.72■□□□□ 0.75
CTDP1-207ENST00000591598 PIGBQ92521 554 aa19.72■□□□□ 0.75
CTDP1-207ENST00000591598 TSC1Q92574 1164 aa19.72■□□□□ 0.75
CTDP1-207ENST00000591598 FAM200AQ8TCP9 573 aa19.71■□□□□ 0.75
CTDP1-207ENST00000591598 TBC1D2BQ9UPU7 963 aa19.71■□□□□ 0.75
CTDP1-207ENST00000591598 ARFGEF2Q9Y6D5 1785 aa19.71■□□□□ 0.75
CTDP1-207ENST00000591598 ZNF335Q9H4Z2 1342 aaPredicted RBP19.71■□□□□ 0.75
CTDP1-207ENST00000591598 ADAMTS7Q9UKP4 1686 aa19.71■□□□□ 0.75
CTDP1-207ENST00000591598 HMGB1P09429 215 aaKnown RBP19.71■□□□□ 0.75
CTDP1-207ENST00000591598 TRIM5Q9C035 493 aa19.71■□□□□ 0.75
CTDP1-207ENST00000591598 PUS7LQ9H0K6 701 aaKnown RBP19.71■□□□□ 0.75
CTDP1-207ENST00000591598 JCADQ9P266 1359 aa19.7■□□□□ 0.74
CTDP1-207ENST00000591598 PFKFB2O60825 505 aa19.7■□□□□ 0.74
CTDP1-207ENST00000591598 IDH1O75874 414 aaKnown RBP19.7■□□□□ 0.74
CTDP1-207ENST00000591598 POLR3DP05423 398 aaPredicted RBP19.7■□□□□ 0.74
CTDP1-207ENST00000591598 ME1P48163 572 aa19.7■□□□□ 0.74
CTDP1-207ENST00000591598 DSCC1Q9BVC3 393 aa19.7■□□□□ 0.74
CTDP1-207ENST00000591598 BTG4Q9NY30 223 aa19.7■□□□□ 0.74
CTDP1-207ENST00000591598 CPDO75976 1380 aa19.7■□□□□ 0.74
CTDP1-207ENST00000591598 NOLC1Q14978 699 aaKnown RBP eCLIP19.7■□□□□ 0.74
CTDP1-207ENST00000591598 ALDH8A1Q9H2A2 487 aaPredicted RBP19.7■□□□□ 0.74
CTDP1-207ENST00000591598 CBX8Q9HC52 389 aa19.7■□□□□ 0.74
CTDP1-207ENST00000591598 COL18A1P39060 1754 aa19.7■□□□□ 0.74
CTDP1-207ENST00000591598 STK11IPQ8N1F8 1099 aa19.7■□□□□ 0.74
CTDP1-207ENST00000591598 USP28Q96RU2 1077 aa19.7■□□□□ 0.74
CTDP1-207ENST00000591598 CARD10Q9BWT7 1032 aa19.7■□□□□ 0.74
CTDP1-207ENST00000591598 GREM2Q9H772 168 aa19.7■□□□□ 0.74
CTDP1-207ENST00000591598 ELP1O95163 1332 aa19.69■□□□□ 0.74
CTDP1-207ENST00000591598 RXRAP19793 462 aa19.69■□□□□ 0.74
CTDP1-207ENST00000591598 PDIA3P30101 505 aaKnown RBP19.69■□□□□ 0.74
CTDP1-207ENST00000591598 CFAP45Q9UL16 551 aa19.69■□□□□ 0.74
CTDP1-207ENST00000591598 FGAP02671 866 aa19.69■□□□□ 0.74
CTDP1-207ENST00000591598 MRC1P22897 1456 aa19.69■□□□□ 0.74
CTDP1-207ENST00000591598 SNAP23O00161 211 aa19.68■□□□□ 0.74
CTDP1-207ENST00000591598 ITGA6P23229 1130 aa19.68■□□□□ 0.74
CTDP1-207ENST00000591598 ZNF165P49910 485 aa19.68■□□□□ 0.74
CTDP1-207ENST00000591598 CCAR1Q8IX12 1150 aaKnown RBP19.68■□□□□ 0.74
CTDP1-207ENST00000591598 DDX19AQ9NUU7 478 aaKnown RBP19.68■□□□□ 0.74
CTDP1-207ENST00000591598 DENND2AQ9ULE3 1009 aa19.68■□□□□ 0.74
CTDP1-207ENST00000591598 STARD3NLO95772 234 aa19.68■□□□□ 0.74
CTDP1-207ENST00000591598 PTGS1P23219 599 aa19.68■□□□□ 0.74
CTDP1-207ENST00000591598 ATP2B3Q16720 1220 aa19.68■□□□□ 0.74
CTDP1-207ENST00000591598 IMMTQ16891 758 aaKnown RBP19.68■□□□□ 0.74
CTDP1-207ENST00000591598 TRMT112Q9UI30 125 aaKnown RBP19.68■□□□□ 0.74
CTDP1-207ENST00000591598 RALYLQ86SE5 291 aaKnown RBP19.68■□□□□ 0.74
CTDP1-207ENST00000591598 ISCA1Q9BUE6 129 aa19.68■□□□□ 0.74
CTDP1-207ENST00000591598 PYCARDQ9ULZ3 195 aa19.68■□□□□ 0.74
CTDP1-207ENST00000591598 STRCP1A6NGW2 1772 aa19.67■□□□□ 0.74
CTDP1-207ENST00000591598 KLF18A0A0U1RQI7 1052 aa19.67■□□□□ 0.74
CTDP1-207ENST00000591598 BCL11BQ9C0K0 894 aaPredicted RBP19.67■□□□□ 0.74
CTDP1-207ENST00000591598 CLSTN2Q9H4D0 955 aa19.67■□□□□ 0.74
CTDP1-207ENST00000591598 AKAP2Q9Y2D5 859 aa19.67■□□□□ 0.74
CTDP1-207ENST00000591598 PALLDQ8WX93 1383 aa19.67■□□□□ 0.74
CTDP1-207ENST00000591598 GOLGA8BA8MQT2 603 aa19.67■□□□□ 0.74
CTDP1-207ENST00000591598 CPLX1O14810 134 aa19.67■□□□□ 0.74
CTDP1-207ENST00000591598 EXOSC10Q01780 885 aaKnown RBP19.67■□□□□ 0.74
CTDP1-207ENST00000591598 CCDC144CPQ8IYA2 1237 aa19.67■□□□□ 0.74
CTDP1-207ENST00000591598 ZSCAN16Q9H4T2 348 aaPredicted RBP19.67■□□□□ 0.74
CTDP1-207ENST00000591598 GPR108Q9NPR9 543 aa19.67■□□□□ 0.74
CTDP1-207ENST00000591598 NRBP1Q9UHY1 535 aa19.66■□□□□ 0.74
CTDP1-207ENST00000591598 PRC1O43663 620 aa19.66■□□□□ 0.74
CTDP1-207ENST00000591598 PDIA4P13667 645 aaKnown RBP19.66■□□□□ 0.74
CTDP1-207ENST00000591598 COL5A2P05997 1499 aaPredicted RBP19.66■□□□□ 0.74
CTDP1-207ENST00000591598 GPAA1O43292 621 aa19.66■□□□□ 0.74
CTDP1-207ENST00000591598 SF3A1Q15459 793 aaKnown RBP19.66■□□□□ 0.74
CTDP1-207ENST00000591598 SLC9C2Q5TAH2 1124 aa19.66■□□□□ 0.74
CTDP1-207ENST00000591598 PIBF1Q8WXW3 757 aa19.66■□□□□ 0.74
CTDP1-207ENST00000591598 ATG3Q9NT62 314 aa19.66■□□□□ 0.74
CTDP1-207ENST00000591598 KIF3AQ9Y496 699 aa19.66■□□□□ 0.74
CTDP1-207ENST00000591598 HMGN5P82970 282 aaKnown RBP19.65■□□□□ 0.74
CTDP1-207ENST00000591598 CCDC73Q6ZRK6 1079 aa19.65■□□□□ 0.74
CTDP1-207ENST00000591598 SMARCC2Q8TAQ2 1214 aa19.65■□□□□ 0.74
CTDP1-207ENST00000591598 CIAO1O76071 339 aa19.65■□□□□ 0.74
CTDP1-207ENST00000591598 LRMPQ12912 555 aa19.65■□□□□ 0.74
CTDP1-207ENST00000591598 CCDC186Q7Z3E2 898 aa19.65■□□□□ 0.74
CTDP1-207ENST00000591598 ZBTB1Q9Y2K1 713 aa19.65■□□□□ 0.74
CTDP1-207ENST00000591598 RRP9O43818 475 aaKnown RBP19.64■□□□□ 0.74
CTDP1-207ENST00000591598 ZBTB38Q8NAP3 1195 aaPredicted RBP19.64■□□□□ 0.74
CTDP1-207ENST00000591598 KCNF1Q9H3M0 494 aa19.64■□□□□ 0.74
CTDP1-207ENST00000591598 ZNF213O14771 459 aa19.64■□□□□ 0.73
CTDP1-207ENST00000591598 MCAMP43121 646 aa19.64■□□□□ 0.73
CTDP1-207ENST00000591598 FSIP1Q8NA03 581 aa19.64■□□□□ 0.73
CTDP1-207ENST00000591598 GOLPH3LQ9H4A5 285 aa19.64■□□□□ 0.73
CTDP1-207ENST00000591598 IRS4O14654 1257 aaPredicted RBP19.64■□□□□ 0.73
CTDP1-207ENST00000591598 DCCP43146 1447 aa19.64■□□□□ 0.73
CTDP1-207ENST00000591598 RFX7Q2KHR2 1363 aa19.63■□□□□ 0.73
CTDP1-207ENST00000591598 KINO60870 393 aaKnown RBP19.63■□□□□ 0.73
CTDP1-207ENST00000591598 NKX1-1Q15270 411 aaPredicted RBP19.63■□□□□ 0.73
CTDP1-207ENST00000591598 GOLGA6L6A8MZA4 724 aa19.63■□□□□ 0.73
CTDP1-207ENST00000591598 PCCAP05165 728 aaPredicted RBP19.63■□□□□ 0.73
CTDP1-207ENST00000591598 LLPHQ9BRT6 129 aaKnown RBP19.63■□□□□ 0.73
CTDP1-207ENST00000591598 INCENPQ9NQS7 918 aa19.63■□□□□ 0.73
CTDP1-207ENST00000591598 ORC3Q9UBD5 711 aaPredicted RBP19.63■□□□□ 0.73
CTDP1-207ENST00000591598 CTNNA3Q9UI47 895 aa19.63■□□□□ 0.73
CTDP1-207ENST00000591598 A0A1B0GVL5 298 aa19.63■□□□□ 0.73
CTDP1-207ENST00000591598 GOLGA6L19H0YKK7 550 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms