RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 OGFRQ9NZT2 677 aa11.44□□□□□ -0.58
LINC01539-201ENST00000587904 SH3TC1Q8TE82 1336 aa11.44□□□□□ -0.58
LINC01539-201ENST00000587904 ATRNO75882 1429 aa11.44□□□□□ -0.58
LINC01539-201ENST00000587904 RIC1Q4ADV7 1423 aa11.44□□□□□ -0.58
LINC01539-201ENST00000587904 RTL9Q8NET4 1388 aa11.44□□□□□ -0.58
LINC01539-201ENST00000587904 KCNQ2O43526 872 aa11.44□□□□□ -0.58
LINC01539-201ENST00000587904 NEK4P51957 841 aa11.44□□□□□ -0.58
LINC01539-201ENST00000587904 NMIQ13287 307 aaPredicted RBP11.44□□□□□ -0.58
LINC01539-201ENST00000587904 CLEC4GQ6UXB4 293 aa11.44□□□□□ -0.58
LINC01539-201ENST00000587904 CREBRFQ8IUR6 639 aa11.44□□□□□ -0.58
LINC01539-201ENST00000587904 CEP120Q8N960 986 aa11.44□□□□□ -0.58
LINC01539-201ENST00000587904 KCNB2Q92953 911 aa11.44□□□□□ -0.58
LINC01539-201ENST00000587904 ZNF594Q96JF6 807 aaPredicted RBP11.44□□□□□ -0.58
LINC01539-201ENST00000587904 A0A1B0GUL7 405 aa11.43□□□□□ -0.58
LINC01539-201ENST00000587904 ITGA6P23229 1130 aa11.43□□□□□ -0.58
LINC01539-201ENST00000587904 UTP14AQ9BVJ6 771 aaKnown RBP11.43□□□□□ -0.58
LINC01539-201ENST00000587904 MAPK8IP2Q13387 824 aaPredicted RBP11.42□□□□□ -0.58
LINC01539-201ENST00000587904 RC3H1Q5TC82 1133 aaKnown RBP11.42□□□□□ -0.58
LINC01539-201ENST00000587904 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.42□□□□□ -0.58
LINC01539-201ENST00000587904 PDCL2Q8N4E4 241 aa11.42□□□□□ -0.58
LINC01539-201ENST00000587904 KBTBD3Q8NAB2 608 aa11.42□□□□□ -0.58
LINC01539-201ENST00000587904 GJD4Q96KN9 370 aaPredicted RBP11.42□□□□□ -0.58
LINC01539-201ENST00000587904 NEUROD6Q96NK8 337 aa11.42□□□□□ -0.58
LINC01539-201ENST00000587904 TM6SF1Q9BZW5 370 aa11.42□□□□□ -0.58
LINC01539-201ENST00000587904 SNX14Q9Y5W7 946 aa11.42□□□□□ -0.58
LINC01539-201ENST00000587904 LY75O60449 1722 aa11.42□□□□□ -0.58
LINC01539-201ENST00000587904 DDX60Q8IY21 1712 aaKnown RBP11.42□□□□□ -0.58
LINC01539-201ENST00000587904 ARAP2Q8WZ64 1704 aa11.42□□□□□ -0.58
LINC01539-201ENST00000587904 PHF14O94880 888 aa11.42□□□□□ -0.58
LINC01539-201ENST00000587904 RAB3GAP1Q15042 981 aa11.42□□□□□ -0.58
LINC01539-201ENST00000587904 LRRFIP1Q32MZ4 808 aaKnown RBP11.42□□□□□ -0.58
LINC01539-201ENST00000587904 CCDC158Q5M9N0 1113 aa11.42□□□□□ -0.58
LINC01539-201ENST00000587904 MAP4K1Q92918 833 aa11.42□□□□□ -0.58
LINC01539-201ENST00000587904 PUS3Q9BZE2 481 aaKnown RBP11.42□□□□□ -0.58
LINC01539-201ENST00000587904 GREM2Q9H772 168 aa11.42□□□□□ -0.58
LINC01539-201ENST00000587904 AFF2P51816 1311 aa11.41□□□□□ -0.58
LINC01539-201ENST00000587904 A0A0D9SFI3 127 aa11.41□□□□□ -0.58
LINC01539-201ENST00000587904 ONECUT3O60422 494 aaPredicted RBP11.41□□□□□ -0.58
LINC01539-201ENST00000587904 MYCNP04198 464 aaPredicted RBP11.41□□□□□ -0.58
LINC01539-201ENST00000587904 ZKSCAN1P17029 563 aaPredicted RBP11.41□□□□□ -0.58
LINC01539-201ENST00000587904 ZNF445P59923 1031 aa11.41□□□□□ -0.58
LINC01539-201ENST00000587904 RNF20Q5VTR2 975 aa11.41□□□□□ -0.58
LINC01539-201ENST00000587904 CERS3Q8IU89 383 aa11.41□□□□□ -0.58
LINC01539-201ENST00000587904 LINC00116Q8NCU8 138 aa11.41□□□□□ -0.58
LINC01539-201ENST00000587904 FAM227BQ96M60 508 aa11.41□□□□□ -0.58
LINC01539-201ENST00000587904 PAG1Q9NWQ8 432 aa11.41□□□□□ -0.58
LINC01539-201ENST00000587904 HMG20BQ9P0W2 317 aa11.41□□□□□ -0.58
LINC01539-201ENST00000587904 TRPC5Q9UL62 973 aaPredicted RBP11.41□□□□□ -0.58
LINC01539-201ENST00000587904 RIPOR2Q9Y4F9 1068 aa11.41□□□□□ -0.58
LINC01539-201ENST00000587904 TIMM10P62072 90 aa11.4□□□□□ -0.58
LINC01539-201ENST00000587904 NUCB2P80303 420 aa11.4□□□□□ -0.58
LINC01539-201ENST00000587904 POTEAQ6S8J7 498 aa11.4□□□□□ -0.58
LINC01539-201ENST00000587904 LDHAL6AQ6ZMR3 332 aa11.4□□□□□ -0.58
LINC01539-201ENST00000587904 INTS4Q96HW7 963 aaKnown RBP11.4□□□□□ -0.58
LINC01539-201ENST00000587904 TRIM34Q9BYJ4 488 aa11.4□□□□□ -0.58
LINC01539-201ENST00000587904 SBF2Q86WG5 1849 aa11.4□□□□□ -0.58
LINC01539-201ENST00000587904 MROH5Q6ZUA9 1318 aa11.4□□□□□ -0.58
LINC01539-201ENST00000587904 NTSR2O95665 410 aa11.4□□□□□ -0.58
LINC01539-201ENST00000587904 IFIT1P09914 478 aaKnown RBP11.4□□□□□ -0.58
LINC01539-201ENST00000587904 CAPN2P17655 700 aa11.4□□□□□ -0.58
LINC01539-201ENST00000587904 PTH1RQ03431 593 aa11.4□□□□□ -0.58
LINC01539-201ENST00000587904 CUL4AQ13619 759 aa11.4□□□□□ -0.58
LINC01539-201ENST00000587904 NECTIN1Q15223 517 aa11.4□□□□□ -0.58
LINC01539-201ENST00000587904 METTL24Q5JXM2 366 aa11.4□□□□□ -0.58
LINC01539-201ENST00000587904 SUSD4Q5VX71 490 aa11.4□□□□□ -0.58
LINC01539-201ENST00000587904 ZNF512BQ96KM6 892 aaPredicted RBP11.4□□□□□ -0.58
LINC01539-201ENST00000587904 CNNM1Q9NRU3 951 aa11.4□□□□□ -0.58
LINC01539-201ENST00000587904 NIP7Q9Y221 180 aaKnown RBP eCLIP11.4□□□□□ -0.58
LINC01539-201ENST00000587904 SLFN14P0C7P3 912 aa11.39□□□□□ -0.59
LINC01539-201ENST00000587904 KIAA2012Q0VF49 1180 aa11.39□□□□□ -0.59
LINC01539-201ENST00000587904 CCDC152Q4G0S7 254 aa11.39□□□□□ -0.59
LINC01539-201ENST00000587904 TTC39AQ5SRH9 613 aa11.39□□□□□ -0.59
LINC01539-201ENST00000587904 GORABQ5T7V8 394 aa11.39□□□□□ -0.59
LINC01539-201ENST00000587904 CTR9Q6PD62 1173 aa11.39□□□□□ -0.59
LINC01539-201ENST00000587904 SYNE4Q8N205 404 aa11.39□□□□□ -0.59
LINC01539-201ENST00000587904 ANKRD7Q92527 254 aa11.39□□□□□ -0.59
LINC01539-201ENST00000587904 TMX3Q96JJ7 454 aa11.39□□□□□ -0.59
LINC01539-201ENST00000587904 HELLSQ9NRZ9 838 aa11.39□□□□□ -0.59
LINC01539-201ENST00000587904 RBM8AQ9Y5S9 174 aaKnown RBP11.39□□□□□ -0.59
LINC01539-201ENST00000587904 COL24A1Q17RW2 1714 aa11.39□□□□□ -0.59
LINC01539-201ENST00000587904 ZFYP08048 801 aaPredicted RBP11.39□□□□□ -0.59
LINC01539-201ENST00000587904 MCMDC2Q4G0Z9 681 aa11.39□□□□□ -0.59
LINC01539-201ENST00000587904 VGLL2Q8N8G2 317 aa11.39□□□□□ -0.59
LINC01539-201ENST00000587904 XAGE2Q96GT9 111 aa11.39□□□□□ -0.59
LINC01539-201ENST00000587904 RPAP1Q9BWH6 1393 aaPredicted RBP11.38□□□□□ -0.59
LINC01539-201ENST00000587904 TAF1LQ8IZX4 1826 aa11.38□□□□□ -0.59
LINC01539-201ENST00000587904 GOLIM4O00461 696 aa11.38□□□□□ -0.59
LINC01539-201ENST00000587904 RPS6KA4O75676 772 aa11.38□□□□□ -0.59
LINC01539-201ENST00000587904 PSMA5P28066 241 aa11.38□□□□□ -0.59
LINC01539-201ENST00000587904 TSGA10IPQ3SY00 556 aa11.38□□□□□ -0.59
LINC01539-201ENST00000587904 USPL1Q5W0Q7 1092 aa11.38□□□□□ -0.59
LINC01539-201ENST00000587904 CREB3L3Q68CJ9 461 aa11.38□□□□□ -0.59
LINC01539-201ENST00000587904 PRPF40BQ6NWY9 871 aaKnown RBP11.38□□□□□ -0.59
LINC01539-201ENST00000587904 CLEC17AQ6ZS10 378 aa11.38□□□□□ -0.59
LINC01539-201ENST00000587904 DDX46Q7L014 1031 aaKnown RBP11.38□□□□□ -0.59
LINC01539-201ENST00000587904 RASEFQ8IZ41 740 aa11.38□□□□□ -0.59
LINC01539-201ENST00000587904 EDC3Q96F86 508 aaKnown RBP11.38□□□□□ -0.59
LINC01539-201ENST00000587904 TTC14Q96N46 770 aa11.38□□□□□ -0.59
LINC01539-201ENST00000587904 CCDC85AQ96PX6 553 aaPredicted RBP11.38□□□□□ -0.59
LINC01539-201ENST00000587904 UPF3BQ9BZI7 483 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms