RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ZNF532Q9HCE3 1301 aa12.2□□□□□ -0.46
RFFL-212ENST00000584655 OVOS2A0A0G2JMS6 1433 aa12.2□□□□□ -0.46
RFFL-212ENST00000584655 PTMAP06454 111 aaKnown RBP12.2□□□□□ -0.46
RFFL-212ENST00000584655 IL6STP40189 918 aaPredicted RBP12.2□□□□□ -0.46
RFFL-212ENST00000584655 ATP2B2Q01814 1243 aa12.2□□□□□ -0.46
RFFL-212ENST00000584655 ZRSR1Q15695 479 aaKnown RBP12.2□□□□□ -0.46
RFFL-212ENST00000584655 AIFM3Q96NN9 605 aa12.2□□□□□ -0.46
RFFL-212ENST00000584655 TTC41PQ6P2S7 1318 aa12.2□□□□□ -0.46
RFFL-212ENST00000584655 SALL3Q9BXA9 1300 aa12.2□□□□□ -0.46
RFFL-212ENST00000584655 RANBP6O60518 1105 aaKnown RBP12.2□□□□□ -0.46
RFFL-212ENST00000584655 PDE8AO60658 829 aa12.2□□□□□ -0.46
RFFL-212ENST00000584655 CYP7A1P22680 504 aa12.2□□□□□ -0.46
RFFL-212ENST00000584655 CHRNDQ07001 517 aa12.2□□□□□ -0.46
RFFL-212ENST00000584655 CDC37L1Q7L3B6 337 aa12.2□□□□□ -0.46
RFFL-212ENST00000584655 KBTBD3Q8NAB2 608 aa12.2□□□□□ -0.46
RFFL-212ENST00000584655 BICD2Q8TD16 824 aa12.2□□□□□ -0.46
RFFL-212ENST00000584655 TEX13AQ9BXU3 409 aaPredicted RBP12.2□□□□□ -0.46
RFFL-212ENST00000584655 DDX11L8A8MPP1 907 aa12.19□□□□□ -0.46
RFFL-212ENST00000584655 DYNLL1P63167 89 aaKnown RBP12.19□□□□□ -0.46
RFFL-212ENST00000584655 ANKRD18AQ8IVF6 992 aa12.19□□□□□ -0.46
RFFL-212ENST00000584655 ARHGEF1Q92888 912 aaKnown RBP12.19□□□□□ -0.46
RFFL-212ENST00000584655 PHKBQ93100 1093 aa12.19□□□□□ -0.46
RFFL-212ENST00000584655 TRIM44Q96DX7 344 aaPredicted RBP12.19□□□□□ -0.46
RFFL-212ENST00000584655 SLURP2P0DP57 97 aa12.19□□□□□ -0.46
RFFL-212ENST00000584655 HSPD1P10809 573 aaKnown RBP12.19□□□□□ -0.46
RFFL-212ENST00000584655 TRDNQ13061 729 aa12.19□□□□□ -0.46
RFFL-212ENST00000584655 RAB3GAP1Q15042 981 aa12.19□□□□□ -0.46
RFFL-212ENST00000584655 APBA3O96018 575 aa12.19□□□□□ -0.46
RFFL-212ENST00000584655 NUCB2P80303 420 aa12.19□□□□□ -0.46
RFFL-212ENST00000584655 STOX1Q6ZVD7 989 aa12.19□□□□□ -0.46
RFFL-212ENST00000584655 USP48Q86UV5 1035 aa12.19□□□□□ -0.46
RFFL-212ENST00000584655 MAST3O60307 1309 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 FGAP02671 866 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 PCCAP05165 728 aaPredicted RBP12.18□□□□□ -0.46
RFFL-212ENST00000584655 CYP2E1P05181 493 aaPredicted RBP12.18□□□□□ -0.46
RFFL-212ENST00000584655 RASGRF1Q13972 1273 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 GIMAP6Q6P9H5 292 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 TXNRD3Q86VQ6 643 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 SNX21Q969T3 373 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 ISCA1Q9BUE6 129 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 SENP2Q9HC62 589 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 STRCP1A6NGW2 1772 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 ZNF213O14771 459 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 XRCC6P12956 609 aaKnown RBP eCLIP12.18□□□□□ -0.46
RFFL-212ENST00000584655 ATP5JP18859 108 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 CASP7P55210 303 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 CCDC152Q4G0S7 254 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 NAPBQ9H115 298 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 SAP30BPQ9UHR5 308 aaKnown RBP12.18□□□□□ -0.46
RFFL-212ENST00000584655 TOPAZ1Q8N9V7 1692 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 GOLGA8BA8MQT2 603 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 RNF113AO15541 343 aaKnown RBP12.18□□□□□ -0.46
RFFL-212ENST00000584655 STX6O43752 255 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 CREBRFQ8IUR6 639 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 NKX2-3Q8TAU0 364 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 NLRP3Q96P20 1036 aa12.18□□□□□ -0.46
RFFL-212ENST00000584655 AATFQ9NY61 560 aaKnown RBP eCLIP12.18□□□□□ -0.46
RFFL-212ENST00000584655 KLF18A0A0U1RQI7 1052 aa12.17□□□□□ -0.46
RFFL-212ENST00000584655 SLC4A4Q9Y6R1 1079 aa12.17□□□□□ -0.46
RFFL-212ENST00000584655 PDE8BO95263 885 aa12.17□□□□□ -0.46
RFFL-212ENST00000584655 DIXDC1Q155Q3 683 aa12.17□□□□□ -0.46
RFFL-212ENST00000584655 TRAPPC3LQ5T215 181 aa12.17□□□□□ -0.46
RFFL-212ENST00000584655 AKAP2Q9Y2D5 859 aa12.17□□□□□ -0.46
RFFL-212ENST00000584655 NFIXQ14938 502 aa12.17□□□□□ -0.46
RFFL-212ENST00000584655 ANP32BQ92688 251 aaKnown RBP12.17□□□□□ -0.46
RFFL-212ENST00000584655 SLC5A1P13866 664 aa12.16□□□□□ -0.46
RFFL-212ENST00000584655 MTX1Q13505 466 aa12.16□□□□□ -0.46
RFFL-212ENST00000584655 HAUS7Q99871 368 aa12.16□□□□□ -0.46
RFFL-212ENST00000584655 MXD3Q9BW11 206 aa12.16□□□□□ -0.46
RFFL-212ENST00000584655 CPDO75976 1380 aa12.16□□□□□ -0.46
RFFL-212ENST00000584655 ADD1P35611 737 aaKnown RBP12.16□□□□□ -0.46
RFFL-212ENST00000584655 EIF6P56537 245 aaKnown RBP12.16□□□□□ -0.46
RFFL-212ENST00000584655 DOK7Q18PE1 504 aa12.16□□□□□ -0.46
RFFL-212ENST00000584655 HSP90AA4PQ58FG1 418 aa12.16□□□□□ -0.46
RFFL-212ENST00000584655 HMG20BQ9P0W2 317 aa12.16□□□□□ -0.46
RFFL-212ENST00000584655 EIF5P55010 431 aaKnown RBP12.16□□□□□ -0.46
RFFL-212ENST00000584655 PICALMQ13492 652 aa12.16□□□□□ -0.46
RFFL-212ENST00000584655 ZNF652Q9Y2D9 606 aa12.16□□□□□ -0.46
RFFL-212ENST00000584655 SPATA31A5Q5VU36 1347 aa12.16□□□□□ -0.46
RFFL-212ENST00000584655 SPATA31A7Q8IWB4 1347 aa12.16□□□□□ -0.46
RFFL-212ENST00000584655 PSMA5P28066 241 aa12.15□□□□□ -0.46
RFFL-212ENST00000584655 SF3A1Q15459 793 aaKnown RBP12.15□□□□□ -0.46
RFFL-212ENST00000584655 FAM47AQ5JRC9 791 aa12.15□□□□□ -0.46
RFFL-212ENST00000584655 GJD4Q96KN9 370 aaPredicted RBP12.15□□□□□ -0.46
RFFL-212ENST00000584655 LRRC4BQ9NT99 713 aa12.15□□□□□ -0.46
RFFL-212ENST00000584655 RBM5P52756 815 aaKnown RBP eCLIP12.15□□□□□ -0.46
RFFL-212ENST00000584655 CAMTA2O94983 1202 aa12.15□□□□□ -0.46
RFFL-212ENST00000584655 SPECC1Q5M775 1068 aa12.15□□□□□ -0.46
RFFL-212ENST00000584655 ZNF830Q96NB3 372 aaPredicted RBP12.15□□□□□ -0.46
RFFL-212ENST00000584655 E7EWF7 191 aa12.15□□□□□ -0.47
RFFL-212ENST00000584655 PRC1O43663 620 aa12.15□□□□□ -0.47
RFFL-212ENST00000584655 PRDX5P30044 214 aa12.15□□□□□ -0.47
RFFL-212ENST00000584655 IMMTQ16891 758 aaKnown RBP12.15□□□□□ -0.47
RFFL-212ENST00000584655 SPATA5Q8NB90 893 aa12.15□□□□□ -0.47
RFFL-212ENST00000584655 GPT2Q8TD30 523 aa12.15□□□□□ -0.47
RFFL-212ENST00000584655 MAP4K1Q92918 833 aa12.15□□□□□ -0.47
RFFL-212ENST00000584655 DHX16O60231 1041 aaKnown RBP12.14□□□□□ -0.47
RFFL-212ENST00000584655 NECTIN1Q15223 517 aa12.14□□□□□ -0.47
RFFL-212ENST00000584655 SPC24Q8NBT2 197 aa12.14□□□□□ -0.47
RFFL-212ENST00000584655 RPGRQ92834 1020 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms