RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 A0A1B0GUL7 405 aa10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 ERICH4A6NGS2 130 aa10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 DHX32Q7L7V1 743 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 MTERF4Q7Z6M4 381 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 MICU3Q86XE3 530 aa10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 FAM89AQ96GI7 184 aa10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 INCENPQ9NQS7 918 aa10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 SPTLC3Q9NUV7 552 aa10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 NPHP4O75161 1426 aaPredicted RBP10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 USP42Q9H9J4 1324 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 IDH1O75874 414 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 CTDNEP1O95476 244 aa10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 MAPK8IP2Q13387 824 aaPredicted RBP10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 PTPN14Q15678 1187 aa10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 RALYLQ86SE5 291 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 C8orf76Q96K31 380 aa10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 HSPD1P10809 573 aaKnown RBP10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 PHKG2P15735 406 aa10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 ATP5JP18859 108 aa10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 NDUFA8P51970 172 aa10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 NCBP1Q09161 790 aaKnown RBP10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 STX1AQ16623 288 aa10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 DPCR1Q3MIW9 517 aa10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 HELBQ8NG08 1087 aaPredicted RBP10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 PHKBQ93100 1093 aa10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 IFNKQ9P0W0 207 aa10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 ORC3Q9UBD5 711 aaPredicted RBP10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 XRN1Q8IZH2 1706 aaKnown RBP10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 MED23Q9ULK4 1368 aa10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 FAM208AQ9UK61 1670 aaKnown RBP10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 UBE2Q2LH0YL09 131 aa10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 ELF2Q15723 593 aa10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 SYNE3Q6ZMZ3 975 aa10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 NFXL1Q6ZNB6 911 aa10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 CEP57L1Q8IYX8 460 aa10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 KBTBD3Q8NAB2 608 aa10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 ZNF215Q9UL58 517 aaPredicted RBP10.47□□□□□ -0.73
HDGFL3-206ENST00000568294 SNAP23O00161 211 aa10.46□□□□□ -0.73
HDGFL3-206ENST00000568294 CYP27B1O15528 508 aa10.46□□□□□ -0.73
HDGFL3-206ENST00000568294 TOM1L2Q6ZVM7 507 aa10.46□□□□□ -0.73
HDGFL3-206ENST00000568294 CCAR2Q8N163 923 aaKnown RBP10.46□□□□□ -0.73
HDGFL3-206ENST00000568294 MAST3O60307 1309 aa10.46□□□□□ -0.73
HDGFL3-206ENST00000568294 NWD1Q149M9 1564 aa10.46□□□□□ -0.73
HDGFL3-206ENST00000568294 IFNL2Q8IZJ0 200 aa10.46□□□□□ -0.73
HDGFL3-206ENST00000568294 PDILTQ8N807 584 aa10.46□□□□□ -0.73
HDGFL3-206ENST00000568294 OSBP2Q969R2 916 aa10.46□□□□□ -0.73
HDGFL3-206ENST00000568294 PCDHA7Q9UN72 937 aa10.46□□□□□ -0.73
HDGFL3-206ENST00000568294 PXDNLA1KZ92 1463 aa10.46□□□□□ -0.74
HDGFL3-206ENST00000568294 TPM3P06753 285 aa10.46□□□□□ -0.74
HDGFL3-206ENST00000568294 SCARF1Q14162 830 aa10.46□□□□□ -0.74
HDGFL3-206ENST00000568294 CMTR1Q8N1G2 835 aaKnown RBP10.46□□□□□ -0.74
HDGFL3-206ENST00000568294 ZNF396Q96N95 335 aaPredicted RBP10.46□□□□□ -0.74
HDGFL3-206ENST00000568294 TRERF1Q96PN7 1200 aa10.46□□□□□ -0.74
HDGFL3-206ENST00000568294 ST7Q9NRC1 585 aa10.46□□□□□ -0.74
HDGFL3-206ENST00000568294 CEP126Q9P2H0 1117 aa10.46□□□□□ -0.74
HDGFL3-206ENST00000568294 ERBB3P21860 1342 aa10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 RGPD1P0DJD0 1748 aa10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 PRC1O43663 620 aa10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 PDIA3P30101 505 aaKnown RBP10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 CCDC57Q2TAC2 916 aa10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 HAUS7Q99871 368 aa10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 EPB41L2O43491 1005 aaKnown RBP10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 ZAP70P43403 619 aa10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 LRRC8AQ8IWT6 810 aa10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 TDRD7Q8NHU6 1098 aaKnown RBP10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 RFX5P48382 616 aaPredicted RBP10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 SYT10Q6XYQ8 523 aa10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 PLA2G4DQ86XP0 818 aa10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 MRPS27Q92552 414 aaKnown RBP10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 ZKSCAN3Q9BRR0 538 aa10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 XPO4Q9C0E2 1151 aaKnown RBP10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 COPRSQ9NQ92 184 aa10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 CWC25Q9NXE8 425 aaPredicted RBP10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 IQSEC3Q9UPP2 1182 aaPredicted RBP10.45□□□□□ -0.74
HDGFL3-206ENST00000568294 ELP1O95163 1332 aa10.44□□□□□ -0.74
HDGFL3-206ENST00000568294 ATP1A3P13637 1013 aa10.44□□□□□ -0.74
HDGFL3-206ENST00000568294 ADD1P35611 737 aaKnown RBP10.44□□□□□ -0.74
HDGFL3-206ENST00000568294 CLIC6Q96NY7 704 aa10.44□□□□□ -0.74
HDGFL3-206ENST00000568294 ZSCAN16Q9H4T2 348 aaPredicted RBP10.44□□□□□ -0.74
HDGFL3-206ENST00000568294 ANO10Q9NW15 660 aa10.44□□□□□ -0.74
HDGFL3-206ENST00000568294 PRDM4Q9UKN5 801 aa10.44□□□□□ -0.74
HDGFL3-206ENST00000568294 UBR1Q8IWV7 1749 aa10.44□□□□□ -0.74
HDGFL3-206ENST00000568294 NBPF26B4DH59 902 aa10.44□□□□□ -0.74
HDGFL3-206ENST00000568294 SERPINC1P01008 464 aa10.44□□□□□ -0.74
HDGFL3-206ENST00000568294 NBPF14Q5TI25 921 aa10.44□□□□□ -0.74
HDGFL3-206ENST00000568294 NBPF10Q6P3W6 841 aaKnown RBP10.44□□□□□ -0.74
HDGFL3-206ENST00000568294 NBPF15Q8N660 670 aa10.44□□□□□ -0.74
HDGFL3-206ENST00000568294 KAT6BQ8WYB5 2073 aa10.44□□□□□ -0.74
HDGFL3-206ENST00000568294 PFKFB2O60825 505 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 ATF3P18847 181 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 FAM160A1Q05DH4 1040 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 CFAP100Q494V2 611 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 LRRN4CLQ8ND94 238 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 PUS7LQ9H0K6 701 aaKnown RBP10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 ZSWIM4Q9H7M6 989 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 SLC3A2P08195 630 aaKnown RBP10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 IQCB1Q15051 598 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 METTL24Q5JXM2 366 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 CCDC158Q5M9N0 1113 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 SMAP1Q8IYB5 467 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms