RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 TM4SF5O14894 197 aa6.22□□□□□ -1.41
CHD9-211ENST00000564600 DHX15O43143 795 aaKnown RBP6.22□□□□□ -1.41
CHD9-211ENST00000564600 ADAM11O75078 769 aa6.22□□□□□ -1.41
CHD9-211ENST00000564600 SPINK2P20155 84 aa6.22□□□□□ -1.41
CHD9-211ENST00000564600 ARID4AP29374 1257 aaPredicted RBP6.22□□□□□ -1.41
CHD9-211ENST00000564600 HOXA10P31260 410 aaPredicted RBP6.22□□□□□ -1.41
CHD9-211ENST00000564600 CD68P34810 354 aaPredicted RBP6.22□□□□□ -1.41
CHD9-211ENST00000564600 KIAA1211Q6ZU35 1233 aa6.22□□□□□ -1.41
CHD9-211ENST00000564600 FOXD4L4Q8WXT5 416 aaPredicted RBP6.22□□□□□ -1.41
CHD9-211ENST00000564600 RBSNQ9H1K0 784 aa6.22□□□□□ -1.41
CHD9-211ENST00000564600 PPP1R15AO75807 674 aaPredicted RBP6.21□□□□□ -1.42
CHD9-211ENST00000564600 ACPPP15309 386 aa6.21□□□□□ -1.42
CHD9-211ENST00000564600 EPHA1P21709 976 aa6.21□□□□□ -1.42
CHD9-211ENST00000564600 SHKBP1Q8TBC3 707 aa6.21□□□□□ -1.42
CHD9-211ENST00000564600 KCNF1Q9H3M0 494 aa6.21□□□□□ -1.42
CHD9-211ENST00000564600 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.21□□□□□ -1.42
CHD9-211ENST00000564600 UBAP1LF5GYI3 381 aa6.2□□□□□ -1.42
CHD9-211ENST00000564600 YBX3P16989 372 aaKnown RBP eCLIP6.2□□□□□ -1.42
CHD9-211ENST00000564600 SSFA2P28290 1259 aa6.2□□□□□ -1.42
CHD9-211ENST00000564600 MTMR3Q13615 1198 aa6.2□□□□□ -1.42
CHD9-211ENST00000564600 NLRP13Q86W25 1043 aa6.2□□□□□ -1.42
CHD9-211ENST00000564600 ATCAYQ86WG3 371 aa6.2□□□□□ -1.42
CHD9-211ENST00000564600 SHISA5Q8N114 240 aa6.2□□□□□ -1.42
CHD9-211ENST00000564600 KLHDC7BQ96G42 594 aa6.2□□□□□ -1.42
CHD9-211ENST00000564600 BRD2P25440 801 aaKnown RBP6.19□□□□□ -1.42
CHD9-211ENST00000564600 CDC27P30260 824 aa6.19□□□□□ -1.42
CHD9-211ENST00000564600 SOX18P35713 384 aa6.19□□□□□ -1.42
CHD9-211ENST00000564600 DUOXA2Q1HG44 320 aa6.19□□□□□ -1.42
CHD9-211ENST00000564600 LCE1DQ5T752 114 aa6.19□□□□□ -1.42
CHD9-211ENST00000564600 HGSNATQ68CP4 663 aa6.19□□□□□ -1.42
CHD9-211ENST00000564600 FAM46AQ96IP4 442 aaKnown RBP6.19□□□□□ -1.42
CHD9-211ENST00000564600 WDR64B1ANS9 1081 aa6.18□□□□□ -1.42
CHD9-211ENST00000564600 FSCN2O14926 492 aa6.18□□□□□ -1.42
CHD9-211ENST00000564600 GSC2O15499 205 aa6.18□□□□□ -1.42
CHD9-211ENST00000564600 TRPA1O75762 1119 aa6.18□□□□□ -1.42
CHD9-211ENST00000564600 BMP3P12645 472 aa6.18□□□□□ -1.42
CHD9-211ENST00000564600 ZAP70P43403 619 aa6.18□□□□□ -1.42
CHD9-211ENST00000564600 PREPP48147 710 aa6.18□□□□□ -1.42
CHD9-211ENST00000564600 NLRP12P59046 1061 aa6.18□□□□□ -1.42
CHD9-211ENST00000564600 RNF43Q68DV7 783 aa6.18□□□□□ -1.42
CHD9-211ENST00000564600 MYRFLQ96LU7 910 aa6.18□□□□□ -1.42
CHD9-211ENST00000564600 MFSD14AQ96MC6 490 aa6.18□□□□□ -1.42
CHD9-211ENST00000564600 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
CHD9-211ENST00000564600 STIM2Q9P246 746 aa6.18□□□□□ -1.42
CHD9-211ENST00000564600 KANSL3Q9P2N6 904 aa6.18□□□□□ -1.42
CHD9-211ENST00000564600 BEND4Q6ZU67 534 aa6.17□□□□□ -1.42
CHD9-211ENST00000564600 SLC51AQ86UW1 340 aa6.17□□□□□ -1.42
CHD9-211ENST00000564600 DTX1Q86Y01 620 aa6.17□□□□□ -1.42
CHD9-211ENST00000564600 MAP4K3Q8IVH8 894 aa6.17□□□□□ -1.42
CHD9-211ENST00000564600 ABI1Q8IZP0 508 aa6.17□□□□□ -1.42
CHD9-211ENST00000564600 OR13H1Q8NG92 308 aa6.17□□□□□ -1.42
CHD9-211ENST00000564600 GPR152Q8TDT2 470 aa6.17□□□□□ -1.42
CHD9-211ENST00000564600 DBNDD2Q9BQY9 259 aa6.17□□□□□ -1.42
CHD9-211ENST00000564600 CEP41Q9BYV8 373 aa6.17□□□□□ -1.42
CHD9-211ENST00000564600 SRA1Q9HD15 236 aaKnown RBP6.17□□□□□ -1.42
CHD9-211ENST00000564600 C11orf16Q9NQ32 467 aa6.17□□□□□ -1.42
CHD9-211ENST00000564600 ADGRE2Q9UHX3 823 aa6.17□□□□□ -1.42
CHD9-211ENST00000564600 WNT11O96014 354 aa6.16□□□□□ -1.42
CHD9-211ENST00000564600 HOXD8P13378 290 aaPredicted RBP6.16□□□□□ -1.42
CHD9-211ENST00000564600 HYAL2Q12891 473 aa6.16□□□□□ -1.42
CHD9-211ENST00000564600 FAM20CQ8IXL6 584 aa6.16□□□□□ -1.42
CHD9-211ENST00000564600 FBXL6Q8N531 539 aa6.16□□□□□ -1.42
CHD9-211ENST00000564600 GTF3C2Q8WUA4 911 aaPredicted RBP6.16□□□□□ -1.42
CHD9-211ENST00000564600 POP1Q99575 1024 aaKnown RBP6.16□□□□□ -1.42
CHD9-211ENST00000564600 SART1O43290 800 aaKnown RBP6.15□□□□□ -1.42
CHD9-211ENST00000564600 SMNDC1O75940 238 aaKnown RBP eCLIP6.15□□□□□ -1.42
CHD9-211ENST00000564600 GRIK1P39086 918 aa6.15□□□□□ -1.42
CHD9-211ENST00000564600 FZD5Q13467 585 aa6.15□□□□□ -1.42
CHD9-211ENST00000564600 HELQQ8TDG4 1101 aa6.15□□□□□ -1.42
CHD9-211ENST00000564600 SLC7A3Q8WY07 619 aa6.15□□□□□ -1.42
CHD9-211ENST00000564600 HHIPQ96QV1 700 aa6.15□□□□□ -1.42
CHD9-211ENST00000564600 MPSTP25325 297 aa6.14□□□□□ -1.43
CHD9-211ENST00000564600 SGO2Q562F6 1265 aa6.14□□□□□ -1.43
CHD9-211ENST00000564600 SPACA7Q96KW9 195 aa6.14□□□□□ -1.43
CHD9-211ENST00000564600 MUC3BQ9H195 1237 aa6.14□□□□□ -1.43
CHD9-211ENST00000564600 ANO2Q9NQ90 1003 aa6.14□□□□□ -1.43
CHD9-211ENST00000564600 TMEM63CQ9P1W3 806 aa6.14□□□□□ -1.43
CHD9-211ENST00000564600 A6NHS1 94 aa6.13□□□□□ -1.43
CHD9-211ENST00000564600 TTC39BQ5VTQ0 682 aaPredicted RBP6.13□□□□□ -1.43
CHD9-211ENST00000564600 NCAPG2Q86XI2 1143 aa6.13□□□□□ -1.43
CHD9-211ENST00000564600 RETREG2Q8NC44 543 aa6.13□□□□□ -1.43
CHD9-211ENST00000564600 NUDT16Q96DE0 195 aaKnown RBP6.13□□□□□ -1.43
CHD9-211ENST00000564600 FAM83CQ9BQN1 747 aa6.13□□□□□ -1.43
CHD9-211ENST00000564600 PBX4Q9BYU1 374 aa6.13□□□□□ -1.43
CHD9-211ENST00000564600 SEC31BQ9NQW1 1179 aa6.13□□□□□ -1.43
CHD9-211ENST00000564600 ZNF211Q13398 564 aaPredicted RBP6.12□□□□□ -1.43
CHD9-211ENST00000564600 OGFOD2Q6N063 350 aa6.12□□□□□ -1.43
CHD9-211ENST00000564600 INTS5Q6P9B9 1019 aaKnown RBP6.12□□□□□ -1.43
CHD9-211ENST00000564600 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.12□□□□□ -1.43
CHD9-211ENST00000564600 CLEC10AQ8IUN9 316 aa6.12□□□□□ -1.43
CHD9-211ENST00000564600 PIK3R5Q8WYR1 880 aa6.12□□□□□ -1.43
CHD9-211ENST00000564600 EDEM1Q92611 657 aa6.12□□□□□ -1.43
CHD9-211ENST00000564600 GGNBP2Q9H3C7 697 aa6.12□□□□□ -1.43
CHD9-211ENST00000564600 CNTN3Q9P232 1028 aa6.12□□□□□ -1.43
CHD9-211ENST00000564600 F13BP05160 661 aa6.11□□□□□ -1.43
CHD9-211ENST00000564600 RXRBP28702 533 aa6.11□□□□□ -1.43
CHD9-211ENST00000564600 EIF1AXP47813 144 aaKnown RBP6.11□□□□□ -1.43
CHD9-211ENST00000564600 UVSSAQ2YD98 709 aa6.11□□□□□ -1.43
CHD9-211ENST00000564600 FAM117BQ6P1L5 589 aa6.11□□□□□ -1.43
CHD9-211ENST00000564600 NFXL1Q6ZNB6 911 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms