RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 CHMP3Q9Y3E7 222 aa11.02□□□□□ -0.65
SMG1-209ENST00000563836 CSB-PGBD3P0DP91 1061 aa11.01□□□□□ -0.65
SMG1-209ENST00000563836 KCNA6P17658 529 aa11.01□□□□□ -0.65
SMG1-209ENST00000563836 TATP17735 454 aaPredicted RBP11.01□□□□□ -0.65
SMG1-209ENST00000563836 GMPRP36959 345 aa11.01□□□□□ -0.65
SMG1-209ENST00000563836 PGBD3Q8N328 593 aa11.01□□□□□ -0.65
SMG1-209ENST00000563836 RUBCNLQ9H714 662 aa11.01□□□□□ -0.65
SMG1-209ENST00000563836 PRKRIP1Q9H875 184 aaPredicted RBP11□□□□□ -0.65
SMG1-209ENST00000563836 TULP4Q9NRJ4 1543 aa10.99□□□□□ -0.65
SMG1-209ENST00000563836 ITSN1Q15811 1721 aa10.99□□□□□ -0.65
SMG1-209ENST00000563836 WIPF1O43516 503 aa10.99□□□□□ -0.65
SMG1-209ENST00000563836 CENPBP07199 599 aaPredicted RBP10.99□□□□□ -0.65
SMG1-209ENST00000563836 UBAP2LQ14157 1087 aaKnown RBP10.99□□□□□ -0.65
SMG1-209ENST00000563836 C7orf43Q8WVR3 580 aa10.99□□□□□ -0.65
SMG1-209ENST00000563836 MYOM1P52179 1685 aa10.98□□□□□ -0.65
SMG1-209ENST00000563836 XRN1Q8IZH2 1706 aaKnown RBP10.98□□□□□ -0.65
SMG1-209ENST00000563836 EFHC2Q5JST6 749 aa10.98□□□□□ -0.65
SMG1-209ENST00000563836 CC2D1BQ5T0F9 858 aaKnown RBP10.98□□□□□ -0.65
SMG1-209ENST00000563836 C1orf53Q5VUE5 145 aa10.98□□□□□ -0.65
SMG1-209ENST00000563836 GTPBP3Q969Y2 492 aaKnown RBP10.98□□□□□ -0.65
SMG1-209ENST00000563836 ZIC5Q96T25 663 aa10.98□□□□□ -0.65
SMG1-209ENST00000563836 CGNL1Q0VF96 1302 aa10.98□□□□□ -0.65
SMG1-209ENST00000563836 ANKRD36BQ8N2N9 1353 aa10.98□□□□□ -0.65
SMG1-209ENST00000563836 ROBO2Q9HCK4 1378 aa10.98□□□□□ -0.65
SMG1-209ENST00000563836 ADGRB2O60241 1585 aa10.98□□□□□ -0.65
SMG1-209ENST00000563836 FOXO3O43524 673 aa10.97□□□□□ -0.65
SMG1-209ENST00000563836 HSPA2P54652 639 aa10.97□□□□□ -0.65
SMG1-209ENST00000563836 OCLNQ16625 522 aa10.97□□□□□ -0.65
SMG1-209ENST00000563836 NLRP8Q86W28 1048 aa10.97□□□□□ -0.65
SMG1-209ENST00000563836 CLP1Q92989 425 aaKnown RBP10.97□□□□□ -0.65
SMG1-209ENST00000563836 NUDT16Q96DE0 195 aaKnown RBP10.97□□□□□ -0.65
SMG1-209ENST00000563836 SLC12A5Q9H2X9 1139 aa10.97□□□□□ -0.65
SMG1-209ENST00000563836 MRS2Q9HD23 443 aa10.97□□□□□ -0.65
SMG1-209ENST00000563836 GPC6Q9Y625 555 aaPredicted RBP10.97□□□□□ -0.65
SMG1-209ENST00000563836 MYBBP1AQ9BQG0 1328 aaKnown RBP10.97□□□□□ -0.65
SMG1-209ENST00000563836 PLEKHH1Q9ULM0 1364 aa10.97□□□□□ -0.65
SMG1-209ENST00000563836 NKTRP30414 1462 aaKnown RBP10.96□□□□□ -0.65
SMG1-209ENST00000563836 LMTK3Q96Q04 1460 aa10.96□□□□□ -0.65
SMG1-209ENST00000563836 PPIP5K1Q6PFW1 1433 aa10.96□□□□□ -0.65
SMG1-209ENST00000563836 PTPRUQ92729 1446 aa10.96□□□□□ -0.65
SMG1-209ENST00000563836 NSD2O96028 1365 aa10.96□□□□□ -0.65
SMG1-209ENST00000563836 A0A1W2PNR3 127 aa10.96□□□□□ -0.65
SMG1-209ENST00000563836 ARSJQ5FYB0 599 aaPredicted RBP10.96□□□□□ -0.65
SMG1-209ENST00000563836 FOXR1Q6PIV2 292 aa10.96□□□□□ -0.65
SMG1-209ENST00000563836 HCN4Q9Y3Q4 1203 aa10.96□□□□□ -0.65
SMG1-209ENST00000563836 ATP7BP35670 1465 aa10.95□□□□□ -0.66
SMG1-209ENST00000563836 NSD3Q9BZ95 1437 aa10.95□□□□□ -0.66
SMG1-209ENST00000563836 NPC1L1Q9UHC9 1359 aa10.95□□□□□ -0.66
SMG1-209ENST00000563836 MORC1Q86VD1 984 aa10.95□□□□□ -0.66
SMG1-209ENST00000563836 YTHDC1Q96MU7 727 aaKnown RBP10.95□□□□□ -0.66
SMG1-209ENST00000563836 COL25A1Q9BXS0 654 aaPredicted RBP10.95□□□□□ -0.66
SMG1-209ENST00000563836 PHACTR1Q9C0D0 580 aa10.95□□□□□ -0.66
SMG1-209ENST00000563836 TMEM88BA6NKF7 163 aa10.94□□□□□ -0.66
SMG1-209ENST00000563836 GPR25O00155 361 aa10.94□□□□□ -0.66
SMG1-209ENST00000563836 PRMT3O60678 531 aa10.94□□□□□ -0.66
SMG1-209ENST00000563836 KRT76Q01546 638 aa10.94□□□□□ -0.66
SMG1-209ENST00000563836 NLRP13Q86W25 1043 aa10.94□□□□□ -0.66
SMG1-209ENST00000563836 ALDH16A1Q8IZ83 802 aa10.94□□□□□ -0.66
SMG1-209ENST00000563836 NGDNQ8NEJ9 315 aaKnown RBP10.94□□□□□ -0.66
SMG1-209ENST00000563836 PRIMPOLQ96LW4 560 aa10.94□□□□□ -0.66
SMG1-209ENST00000563836 SLAIN2Q9P270 581 aa10.94□□□□□ -0.66
SMG1-209ENST00000563836 NWD1Q149M9 1564 aa10.94□□□□□ -0.66
SMG1-209ENST00000563836 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.93□□□□□ -0.66
SMG1-209ENST00000563836 ATF3P18847 181 aa10.93□□□□□ -0.66
SMG1-209ENST00000563836 GAS6Q14393 721 aa10.93□□□□□ -0.66
SMG1-209ENST00000563836 RNFT1Q5M7Z0 435 aa10.93□□□□□ -0.66
SMG1-209ENST00000563836 FIGNL1Q6PIW4 674 aa10.93□□□□□ -0.66
SMG1-209ENST00000563836 BICDL1Q6ZP65 573 aa10.93□□□□□ -0.66
SMG1-209ENST00000563836 TRERF1Q96PN7 1200 aa10.93□□□□□ -0.66
SMG1-209ENST00000563836 CFHR5Q9BXR6 569 aa10.93□□□□□ -0.66
SMG1-209ENST00000563836 ZCCHC2Q9C0B9 1178 aaKnown RBP10.93□□□□□ -0.66
SMG1-209ENST00000563836 ANKARQ7Z5J8 1434 aa10.92□□□□□ -0.66
SMG1-209ENST00000563836 NCOA3Q9Y6Q9 1424 aa10.92□□□□□ -0.66
SMG1-209ENST00000563836 USP32Q8NFA0 1604 aa10.92□□□□□ -0.66
SMG1-209ENST00000563836 FKBP5Q13451 457 aaPredicted RBP10.92□□□□□ -0.66
SMG1-209ENST00000563836 RHPN1Q8TCX5 695 aa10.92□□□□□ -0.66
SMG1-209ENST00000563836 CFAP53Q96M91 514 aa10.92□□□□□ -0.66
SMG1-209ENST00000563836 NDFIP2Q9NV92 336 aa10.92□□□□□ -0.66
SMG1-209ENST00000563836 CXXC1Q9P0U4 656 aaPredicted RBP10.92□□□□□ -0.66
SMG1-209ENST00000563836 ADGRL3Q9HAR2 1447 aa10.92□□□□□ -0.66
SMG1-209ENST00000563836 BRD4O60885 1362 aaPredicted RBP10.91□□□□□ -0.66
SMG1-209ENST00000563836 MSH6P52701 1360 aa10.91□□□□□ -0.66
SMG1-209ENST00000563836 PARD3Q8TEW0 1356 aa10.91□□□□□ -0.66
SMG1-209ENST00000563836 CDC42BPGQ6DT37 1551 aa10.91□□□□□ -0.66
SMG1-209ENST00000563836 SAMD5Q5TGI4 173 aa10.91□□□□□ -0.66
SMG1-209ENST00000563836 KLRG1Q96E93 195 aa10.91□□□□□ -0.66
SMG1-209ENST00000563836 C19orf44Q9H6X5 657 aa10.91□□□□□ -0.66
SMG1-209ENST00000563836 PCDHGC4Q9Y5F7 938 aa10.91□□□□□ -0.66
SMG1-209ENST00000563836 KIF20BQ96Q89 1820 aa10.91□□□□□ -0.66
SMG1-209ENST00000563836 A0A1W2PP64 1363 aa10.9□□□□□ -0.66
SMG1-209ENST00000563836 STRCQ7RTU9 1775 aa10.9□□□□□ -0.66
SMG1-209ENST00000563836 FMN2Q9NZ56 1722 aa10.9□□□□□ -0.66
SMG1-209ENST00000563836 RTN1Q16799 776 aa10.9□□□□□ -0.66
SMG1-209ENST00000563836 CNTNAP3BQ96NU0 1288 aa10.9□□□□□ -0.66
SMG1-209ENST00000563836 CNTNAP3Q9BZ76 1288 aa10.9□□□□□ -0.66
SMG1-209ENST00000563836 PHF24Q9UPV7 400 aa10.9□□□□□ -0.66
SMG1-209ENST00000563836 AKAP12Q02952 1782 aa10.9□□□□□ -0.67
SMG1-209ENST00000563836 NALCNQ8IZF0 1738 aa10.89□□□□□ -0.67
SMG1-209ENST00000563836 BNIP3LO60238 219 aa10.89□□□□□ -0.67
SMG1-209ENST00000563836 WDR43Q15061 677 aaKnown RBP eCLIP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms