RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 KIAA1328Q86T90 577 aa10.78□□□□□ -0.68
CDH1-205ENST00000562836 SYCP3Q8IZU3 236 aa10.78□□□□□ -0.68
CDH1-205ENST00000562836 KDM2BQ8NHM5 1336 aa10.78□□□□□ -0.68
CDH1-205ENST00000562836 ZKSCAN4Q969J2 545 aaPredicted RBP10.78□□□□□ -0.68
CDH1-205ENST00000562836 CIZ1Q9ULV3 898 aaPredicted RBP10.78□□□□□ -0.68
CDH1-205ENST00000562836 CFTRP13569 1480 aa10.77□□□□□ -0.68
CDH1-205ENST00000562836 ROCK1Q13464 1354 aa10.77□□□□□ -0.68
CDH1-205ENST00000562836 CGNL1Q0VF96 1302 aa10.77□□□□□ -0.68
CDH1-205ENST00000562836 ERC2O15083 957 aa10.77□□□□□ -0.68
CDH1-205ENST00000562836 B3GALNT1O75752 331 aa10.77□□□□□ -0.68
CDH1-205ENST00000562836 WASHC5Q12768 1159 aa10.77□□□□□ -0.68
CDH1-205ENST00000562836 ELF2Q15723 593 aa10.77□□□□□ -0.68
CDH1-205ENST00000562836 ALDH1L2Q3SY69 923 aa10.77□□□□□ -0.68
CDH1-205ENST00000562836 CENPQQ7L2Z9 268 aaPredicted RBP10.77□□□□□ -0.68
CDH1-205ENST00000562836 MIPOL1Q8TD10 442 aa10.77□□□□□ -0.68
CDH1-205ENST00000562836 CDC5LQ99459 802 aaKnown RBP10.77□□□□□ -0.68
CDH1-205ENST00000562836 ZMAT5Q9UDW3 170 aaKnown RBP10.77□□□□□ -0.68
CDH1-205ENST00000562836 BICDL2A1A5D9 508 aa10.77□□□□□ -0.69
CDH1-205ENST00000562836 NPHP1O15259 732 aa10.77□□□□□ -0.69
CDH1-205ENST00000562836 VIL1P09327 827 aaKnown RBP10.77□□□□□ -0.69
CDH1-205ENST00000562836 RPL13P26373 211 aaKnown RBP10.77□□□□□ -0.69
CDH1-205ENST00000562836 LIG3P49916 1009 aa10.77□□□□□ -0.69
CDH1-205ENST00000562836 GNPTABQ3T906 1256 aa10.77□□□□□ -0.69
CDH1-205ENST00000562836 ARHGEF25Q86VW2 580 aa10.77□□□□□ -0.69
CDH1-205ENST00000562836 NBPF15Q8N660 670 aa10.77□□□□□ -0.69
CDH1-205ENST00000562836 ANKK1Q8NFD2 765 aa10.77□□□□□ -0.69
CDH1-205ENST00000562836 KIAA1524Q8TCG1 905 aa10.77□□□□□ -0.69
CDH1-205ENST00000562836 CRBNQ96SW2 442 aa10.77□□□□□ -0.69
CDH1-205ENST00000562836 STK31Q9BXU1 1019 aa10.77□□□□□ -0.69
CDH1-205ENST00000562836 HIP1RO75146 1068 aa10.77□□□□□ -0.69
CDH1-205ENST00000562836 KANK3Q6NY19 840 aa10.77□□□□□ -0.69
CDH1-205ENST00000562836 WHAMMQ8TF30 809 aa10.77□□□□□ -0.69
CDH1-205ENST00000562836 CENPTQ96BT3 561 aa10.77□□□□□ -0.69
CDH1-205ENST00000562836 CEP295NLQ96MC4 621 aa10.77□□□□□ -0.69
CDH1-205ENST00000562836 CCDC68Q9H2F9 335 aa10.77□□□□□ -0.69
CDH1-205ENST00000562836 DHX36Q9H2U1 1008 aaKnown RBP10.77□□□□□ -0.69
CDH1-205ENST00000562836 PRELID1Q9Y255 219 aa10.77□□□□□ -0.69
CDH1-205ENST00000562836 CC2D2AQ9P2K1 1620 aa10.76□□□□□ -0.69
CDH1-205ENST00000562836 KIF2AO00139 706 aaPredicted RBP10.76□□□□□ -0.69
CDH1-205ENST00000562836 ALOX15P16050 662 aaPredicted RBP10.76□□□□□ -0.69
CDH1-205ENST00000562836 VASPP50552 380 aaPredicted RBP10.76□□□□□ -0.69
CDH1-205ENST00000562836 GJC2Q5T442 439 aaPredicted RBP10.76□□□□□ -0.69
CDH1-205ENST00000562836 CCSAPQ6IQ19 270 aaPredicted RBP10.76□□□□□ -0.69
CDH1-205ENST00000562836 SEPT14Q6ZU15 432 aa10.76□□□□□ -0.69
CDH1-205ENST00000562836 WDR75Q8IWA0 830 aaKnown RBP10.76□□□□□ -0.69
CDH1-205ENST00000562836 CHCHD4Q8N4Q1 142 aa10.76□□□□□ -0.69
CDH1-205ENST00000562836 RBM41Q96IZ5 413 aaKnown RBP10.76□□□□□ -0.69
CDH1-205ENST00000562836 HOMER3Q9NSC5 361 aa10.76□□□□□ -0.69
CDH1-205ENST00000562836 RCAN3Q9UKA8 241 aa10.76□□□□□ -0.69
CDH1-205ENST00000562836 ERLIN1O75477 346 aa10.76□□□□□ -0.69
CDH1-205ENST00000562836 OAS2P29728 719 aaKnown RBP10.76□□□□□ -0.69
CDH1-205ENST00000562836 SH3BGRP55822 239 aaPredicted RBP10.76□□□□□ -0.69
CDH1-205ENST00000562836 STK11IPQ8N1F8 1099 aa10.76□□□□□ -0.69
CDH1-205ENST00000562836 SH3GL1Q99961 368 aa10.76□□□□□ -0.69
CDH1-205ENST00000562836 ALDH8A1Q9H2A2 487 aaPredicted RBP10.76□□□□□ -0.69
CDH1-205ENST00000562836 HELLSQ9NRZ9 838 aa10.76□□□□□ -0.69
CDH1-205ENST00000562836 PYCARDQ9ULZ3 195 aa10.76□□□□□ -0.69
CDH1-205ENST00000562836 GJA3Q9Y6H8 435 aa10.76□□□□□ -0.69
CDH1-205ENST00000562836 TONSLQ96HA7 1378 aa10.75□□□□□ -0.69
CDH1-205ENST00000562836 CYP27B1O15528 508 aa10.75□□□□□ -0.69
CDH1-205ENST00000562836 PLIN1O60240 522 aa10.75□□□□□ -0.69
CDH1-205ENST00000562836 ZEB2O60315 1214 aa10.75□□□□□ -0.69
CDH1-205ENST00000562836 FUT4P22083 530 aa10.75□□□□□ -0.69
CDH1-205ENST00000562836 RABL6Q3YEC7 729 aaPredicted RBP10.75□□□□□ -0.69
CDH1-205ENST00000562836 HDAC7Q8WUI4 952 aa10.75□□□□□ -0.69
CDH1-205ENST00000562836 CLUAP1Q96AJ1 413 aa10.75□□□□□ -0.69
CDH1-205ENST00000562836 KIAA1522Q9P206 1035 aaPredicted RBP10.75□□□□□ -0.69
CDH1-205ENST00000562836 LDHAP00338 332 aaKnown RBP10.75□□□□□ -0.69
CDH1-205ENST00000562836 SLC4A2P04920 1241 aa10.75□□□□□ -0.69
CDH1-205ENST00000562836 TRIM29Q14134 588 aa10.75□□□□□ -0.69
CDH1-205ENST00000562836 SLFNL1Q499Z3 407 aa10.75□□□□□ -0.69
CDH1-205ENST00000562836 GIMAP1Q8WWP7 306 aa10.75□□□□□ -0.69
CDH1-205ENST00000562836 C6orf203Q9P0P8 240 aaPredicted RBP10.75□□□□□ -0.69
CDH1-205ENST00000562836 SWAP70Q9UH65 585 aa10.75□□□□□ -0.69
CDH1-205ENST00000562836 CARNS1A5YM72 827 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 ATP8B1O43520 1251 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 MTA2O94776 668 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 CYP1A2P05177 515 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 HALP42357 657 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 ITIH3Q06033 890 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 LMNTD2Q8IXW0 634 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 LMBR1Q8WVP7 490 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 TCHPQ9BT92 498 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 TNMDQ9H2S6 317 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 ADAM21Q9UKJ8 722 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 ZNF215Q9UL58 517 aaPredicted RBP10.74□□□□□ -0.69
CDH1-205ENST00000562836 ZMYM3Q14202 1370 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 A0A1B0GVG6 124 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 CLK1P49759 484 aaKnown RBP10.74□□□□□ -0.69
CDH1-205ENST00000562836 DDB1Q16531 1140 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 SAMD14Q8IZD0 417 aaPredicted RBP10.74□□□□□ -0.69
CDH1-205ENST00000562836 CUL5Q93034 780 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 TBC1D32Q96NH3 1257 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 TAOK3Q9H2K8 898 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 PSD3Q9NYI0 1048 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 KIAA1468Q9P260 1216 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 MYO6Q9UM54 1294 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 SLC45A1Q9Y2W3 748 aa10.74□□□□□ -0.69
CDH1-205ENST00000562836 ROCK2O75116 1388 aaKnown RBP10.74□□□□□ -0.69
CDH1-205ENST00000562836 MSL3P1P0C860 447 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms