RNA–Protein interactions for RNA: ENST00000558541.5

CPNE6-207, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-207ENST00000558541 BRCA2P51587 3418 aa17.39■□□□□ 0.37
CPNE6-207ENST00000558541 SH3TC1Q8TE82 1336 aa17.39■□□□□ 0.37
CPNE6-207ENST00000558541 A0A0C4DFX4 3053 aa17.39■□□□□ 0.37
CPNE6-207ENST00000558541 MANSC4A6NHS7 340 aaPredicted RBP17.38■□□□□ 0.37
CPNE6-207ENST00000558541 INHBEP58166 350 aa17.38■□□□□ 0.37
CPNE6-207ENST00000558541 NBPF11Q86T75 865 aa17.38■□□□□ 0.37
CPNE6-207ENST00000558541 NLRP10Q86W26 655 aa17.38■□□□□ 0.37
CPNE6-207ENST00000558541 TBC1D16Q8TBP0 767 aa17.38■□□□□ 0.37
CPNE6-207ENST00000558541 KDM3BQ7LBC6 1761 aa17.38■□□□□ 0.37
CPNE6-207ENST00000558541 EIF4A1P60842 406 aaKnown RBP17.37■□□□□ 0.37
CPNE6-207ENST00000558541 HSP90AB3PQ58FF7 597 aa17.37■□□□□ 0.37
CPNE6-207ENST00000558541 PSME4Q14997 1843 aa17.37■□□□□ 0.37
CPNE6-207ENST00000558541 NBPF9Q3BBW0 867 aa17.36■□□□□ 0.37
CPNE6-207ENST00000558541 SLC9C1Q4G0N8 1177 aa17.36■□□□□ 0.37
CPNE6-207ENST00000558541 DUSP27Q5VZP5 1158 aa17.36■□□□□ 0.37
CPNE6-207ENST00000558541 SLC10A4Q96EP9 437 aa17.36■□□□□ 0.37
CPNE6-207ENST00000558541 ZNF333Q96JL9 665 aa17.36■□□□□ 0.37
CPNE6-207ENST00000558541 ANGEL1Q9UNK9 670 aaKnown RBP17.36■□□□□ 0.37
CPNE6-207ENST00000558541 CT47B1P0C2W7 299 aaPredicted RBP17.35■□□□□ 0.37
CPNE6-207ENST00000558541 EIF2S2P20042 333 aaKnown RBP17.35■□□□□ 0.37
CPNE6-207ENST00000558541 MNX1P50219 401 aaPredicted RBP17.35■□□□□ 0.37
CPNE6-207ENST00000558541 GNAI1P63096 354 aa17.35■□□□□ 0.37
CPNE6-207ENST00000558541 AIMP1Q12904 312 aaKnown RBP17.35■□□□□ 0.37
CPNE6-207ENST00000558541 CDCA7LQ96GN5 454 aa17.35■□□□□ 0.37
CPNE6-207ENST00000558541 BABAM1Q9NWV8 329 aa17.35■□□□□ 0.37
CPNE6-207ENST00000558541 ANKIB1Q9P2G1 1089 aa17.35■□□□□ 0.37
CPNE6-207ENST00000558541 ZNF609O15014 1411 aa17.35■□□□□ 0.37
CPNE6-207ENST00000558541 IGF2BP3O00425 579 aaKnown RBP eCLIP17.34■□□□□ 0.37
CPNE6-207ENST00000558541 UFL1O94874 794 aa17.34■□□□□ 0.37
CPNE6-207ENST00000558541 ANXA1P04083 346 aa17.34■□□□□ 0.37
CPNE6-207ENST00000558541 SP3Q02447 781 aa17.34■□□□□ 0.37
CPNE6-207ENST00000558541 ERBB4Q15303 1308 aa17.34■□□□□ 0.37
CPNE6-207ENST00000558541 OTUD7BQ6GQQ9 843 aa17.34■□□□□ 0.37
CPNE6-207ENST00000558541 DLG5Q8TDM6 1919 aa17.34■□□□□ 0.37
CPNE6-207ENST00000558541 NECTIN2Q92692 538 aa17.34■□□□□ 0.37
CPNE6-207ENST00000558541 IFT57Q9NWB7 429 aa17.34■□□□□ 0.37
CPNE6-207ENST00000558541 CRHR2Q13324 411 aa17.33■□□□□ 0.36
CPNE6-207ENST00000558541 COL6A3P12111 3177 aa17.32■□□□□ 0.36
CPNE6-207ENST00000558541 OGFOD1Q8N543 542 aa17.32■□□□□ 0.36
CPNE6-207ENST00000558541 GGA1Q9UJY5 639 aa17.32■□□□□ 0.36
CPNE6-207ENST00000558541 FZD1Q9UP38 647 aa17.32■□□□□ 0.36
CPNE6-207ENST00000558541 USP17L3A6NCW0 530 aa17.31■□□□□ 0.36
CPNE6-207ENST00000558541 USP17L4A6NCW7 530 aa17.31■□□□□ 0.36
CPNE6-207ENST00000558541 WTIPA6NIX2 430 aaPredicted RBP17.31■□□□□ 0.36
CPNE6-207ENST00000558541 RPS8P62241 208 aaKnown RBP17.31■□□□□ 0.36
CPNE6-207ENST00000558541 ARHGEF6Q15052 776 aa17.31■□□□□ 0.36
CPNE6-207ENST00000558541 LDLRAD1Q5T700 205 aa17.31■□□□□ 0.36
CPNE6-207ENST00000558541 USP17L1Q7RTZ2 530 aa17.31■□□□□ 0.36
CPNE6-207ENST00000558541 FBXW7Q969H0 707 aa17.31■□□□□ 0.36
CPNE6-207ENST00000558541 GMLQ99445 158 aa17.31■□□□□ 0.36
CPNE6-207ENST00000558541 PTCH2Q9Y6C5 1203 aa17.31■□□□□ 0.36
CPNE6-207ENST00000558541 ZNF853P0CG23 659 aa17.3■□□□□ 0.36
CPNE6-207ENST00000558541 SF3B3Q15393 1217 aaKnown RBP17.3■□□□□ 0.36
CPNE6-207ENST00000558541 PROSER3Q2NL68 480 aa17.3■□□□□ 0.36
CPNE6-207ENST00000558541 COPS6Q7L5N1 327 aa17.3■□□□□ 0.36
CPNE6-207ENST00000558541 WNK4Q96J92 1243 aa17.3■□□□□ 0.36
CPNE6-207ENST00000558541 RANBP2P49792 3224 aaKnown RBP17.29■□□□□ 0.36
CPNE6-207ENST00000558541 SASH1O94885 1247 aa17.29■□□□□ 0.36
CPNE6-207ENST00000558541 ZBTB48P10074 688 aaPredicted RBP17.29■□□□□ 0.36
CPNE6-207ENST00000558541 PDIA6Q15084 440 aa17.29■□□□□ 0.36
CPNE6-207ENST00000558541 RTL5Q5HYW3 569 aaPredicted RBP17.29■□□□□ 0.36
CPNE6-207ENST00000558541 XAGE3Q8WTP9 111 aa17.29■□□□□ 0.36
CPNE6-207ENST00000558541 FAM89AQ96GI7 184 aa17.29■□□□□ 0.36
CPNE6-207ENST00000558541 SPINK5Q9NQ38 1064 aaPredicted RBP17.29■□□□□ 0.36
CPNE6-207ENST00000558541 RCAN3Q9UKA8 241 aa17.29■□□□□ 0.36
CPNE6-207ENST00000558541 COL4A1P02462 1669 aa17.29■□□□□ 0.36
CPNE6-207ENST00000558541 WNT10BO00744 389 aa17.28■□□□□ 0.36
CPNE6-207ENST00000558541 CAP1Q01518 475 aa17.28■□□□□ 0.36
CPNE6-207ENST00000558541 CLMNQ96JQ2 1002 aa17.28■□□□□ 0.36
CPNE6-207ENST00000558541 CHL1O00533 1208 aa17.27■□□□□ 0.36
CPNE6-207ENST00000558541 LRP10Q7Z4F1 713 aa17.27■□□□□ 0.36
CPNE6-207ENST00000558541 APOBEC3FQ8IUX4 373 aaKnown RBP17.27■□□□□ 0.36
CPNE6-207ENST00000558541 SH3TC2Q8TF17 1288 aa17.27■□□□□ 0.36
CPNE6-207ENST00000558541 MXD3Q9BW11 206 aa17.27■□□□□ 0.36
CPNE6-207ENST00000558541 PODXL2Q9NZ53 605 aa17.27■□□□□ 0.36
CPNE6-207ENST00000558541 LAMB1P07942 1786 aa17.25■□□□□ 0.35
CPNE6-207ENST00000558541 PPP1R12BO60237 982 aaPredicted RBP17.25■□□□□ 0.35
CPNE6-207ENST00000558541 PODNQ7Z5L7 613 aa17.25■□□□□ 0.35
CPNE6-207ENST00000558541 LRCH3Q96II8 777 aa17.25■□□□□ 0.35
CPNE6-207ENST00000558541 HTATIP2Q9BUP3 242 aa17.25■□□□□ 0.35
CPNE6-207ENST00000558541 CHMP4AQ9BY43 222 aa17.25■□□□□ 0.35
CPNE6-207ENST00000558541 NR2E3Q9Y5X4 410 aa17.25■□□□□ 0.35
CPNE6-207ENST00000558541 FANCIQ9NVI1 1328 aa17.24■□□□□ 0.35
CPNE6-207ENST00000558541 SOX1O00570 391 aaPredicted RBP17.24■□□□□ 0.35
CPNE6-207ENST00000558541 SEC31BQ9NQW1 1179 aa17.24■□□□□ 0.35
CPNE6-207ENST00000558541 ATP5J2-PTCD1G3V325 749 aa17.23■□□□□ 0.35
CPNE6-207ENST00000558541 TSPYL4Q9UJ04 414 aa17.23■□□□□ 0.35
CPNE6-207ENST00000558541 SUPT16HQ9Y5B9 1047 aaKnown RBP17.23■□□□□ 0.35
CPNE6-207ENST00000558541 IRS4O14654 1257 aaPredicted RBP17.22■□□□□ 0.35
CPNE6-207ENST00000558541 NEFLP07196 543 aa17.22■□□□□ 0.35
CPNE6-207ENST00000558541 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.22■□□□□ 0.35
CPNE6-207ENST00000558541 PTPN18Q99952 460 aa17.22■□□□□ 0.35
CPNE6-207ENST00000558541 LAS1LQ9Y4W2 734 aaKnown RBP17.22■□□□□ 0.35
CPNE6-207ENST00000558541 ATP2B4P23634 1241 aa17.21■□□□□ 0.35
CPNE6-207ENST00000558541 TAF1CQ15572 869 aaPredicted RBP17.21■□□□□ 0.35
CPNE6-207ENST00000558541 COL25A1Q9BXS0 654 aaPredicted RBP17.21■□□□□ 0.35
CPNE6-207ENST00000558541 DEFB129Q9H1M3 183 aa17.21■□□□□ 0.35
CPNE6-207ENST00000558541 PRO3102Q9H379 93 aa17.21■□□□□ 0.35
CPNE6-207ENST00000558541 ZFYVE28Q9HCC9 887 aa17.21■□□□□ 0.35
CPNE6-207ENST00000558541 MBIPQ9NS73 344 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms